FC925370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925370 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.384e-20 Identity = 63/168 (37.50%), Postives = 87/168 (51.79%), Query Frame = 2 Query: 311 SKDVTINKSNDLSVRIFLPRQALDSSSSTNKIK------LPVIVYFHGGGFILFSVGTSMTHDFCSNIASEFPAVVVSVDYRLAPEHRLPAAHDDAMEALHWIITTHDEWITNYAD-LTSCFLMGTSAGGNIVYYAGLRAAAEADNMLPLKIKGLILHSPFFGGLNRT 793 S DV I++ +L R++ P A S S T+ +PVIV+FHGG F S +++ C + AVVVSV+YR APE+R P A+DD L W+ W+ + D FL G S+GGNIV+ +RA ++L G IL +P FGG RT Sbjct: 65 SFDVIIDRQTNLLSRVYRPADAGTSPSITDLQNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWV--NSSSWLRSKKDSKVRIFLAGDSSGGNIVHNVAVRAVESRIDVL-----GNILLNPMFGGTERT 225
BLAST of FC925370 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.566e-19 Identity = 59/167 (35.33%), Postives = 88/167 (52.69%), Query Frame = 2 Query: 326 INKSNDLSVRIFLPRQALDSSS----------STNKIKLPVIVYFHGGGFILFSVGTSMTHDFCSNIASEFPAVVVSVDYRLAPEHRLPAAHDDAMEALHWIITTHDEWITNYADL-TSCFLMGTSAGGNIVYYAGLRAAAEADNMLPLKIKGLILHSPFFGGLNRT 793 ++ + +L RI+ P L + ST +I +PV+++FHGG F S +++ FC + + VVVSVDYR +PEHR P A+DD AL+W+ + W+ + D +L G S+GGNI + +RA E +K+ G IL P FGG RT Sbjct: 69 VDSTTNLLTRIYQPASLLHQTRHGTLELTKPLSTTEI-VPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKSR--VWLQSGKDSNVYVYLAGDSSGGNIAHNVAVRATNEG-----VKVLGNILLHPMFGGQERT 227
BLAST of FC925370 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.149e-18 Identity = 51/128 (39.84%), Postives = 73/128 (57.03%), Query Frame = 2 Query: 413 PVIVYFHGGGFILFSVGTSMTHDFCSNIASEFPAVVVSVDYRLAPEHRLPAAHDDAMEALHWIITTHDEWITNYADLTS-CFLMGTSAGGNIVYYAGLRAAAEADNMLPLKIKGLILHSPFFGGLNRT 793 PVI++FHGG F+ S +++ C VVVSV+YR APEHR P A+DD AL W+++ ++ + D + FL G S+GGNI ++ +RAA E +K+ G IL + FGG RT Sbjct: 114 PVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMS--QPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAADEG-----VKVCGNILLNAMFGGTERT 234
BLAST of FC925370 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.957e-17 Identity = 64/185 (34.59%), Postives = 90/185 (48.65%), Query Frame = 2 Query: 266 VAATLDPDDHQTIAVSKDVTINKSNDLSVRIFLPRQA--------LDSSSSTNKIKLPVIVYFHGGGFILFSVGTSMTHDFCSNIASEFPAVVVSVDYRLAPEHRLPAAHDDAMEALHWIITTHDEWITNYAD-LTSCFLMGTSAGGNIVYYAGLRAAAEADNMLPLKIKGLILHSPFFGGLNRT 793 V A +P D S DV I++ +L R++ P A LD + +PVI++FHGG F S +++ C + VVVSV+YR APE+ P A+DD AL+W+ W+ + D FL G S+GGNI + LRA ++L G IL +P FGG RT Sbjct: 53 VTANANPVDG---VFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWV--NSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESGIDVL-----GNILLNPMFGGNERT 227
BLAST of FC925370 vs. ExPASy Swiss-Prot
Match: ADCL2_HUMAN (Arylacetamide deacetylase-like 2 OS=Homo sapiens GN=AADACL2 PE=2 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 1.604e-11 Identity = 47/145 (32.41%), Postives = 75/145 (51.72%), Query Frame = 2 Query: 341 DLSVRIFLPRQALDSSSSTNKIKLPVIVYFHGGGFILFSVGTSMTHDFCSN-IASEFPAVVVSVDYRLAPEHRLPAAHDDAMEALHWIITTHDEWITNY-ADLTSCFLMGTSAGGNIVYYAGLRAAAEADNMLPLKIKGLILHSP 769 D+ VR++LP++ ++ + ++YFHGGGF F DF + A+ AVVV VDYRLAP+H PA +D + A+ + + ++ +T Y D T + G S+GGN+ + + D + KIK +L P Sbjct: 88 DIPVRLYLPKRKSET-------RRRAVIYFHGGGFC-FGSSKQRAFDFLNRWTANTLDAVVVGVDYRLAPQHHFPAQFEDGLAAVKFFLL--EKILTKYGVDPTRICIAGDSSGGNLA--TAVTQQVQNDAEIKHKIKMQVLLYP 220
BLAST of FC925370 vs. ExPASy Swiss-Prot
Match: YFZ3_SCHPO (AB hydrolase superfamily protein C1039.03 OS=Schizosaccharomyces pombe GN=SPAC1039.03 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.095e-11 Identity = 42/116 (36.21%), Postives = 63/116 (54.31%), Query Frame = 2 Query: 413 PVIVYFHGGGFILFSVGTSMTHDFCSNIASEFPAVVVSVDYRLAPEHRLPAAHDDAMEALHWIITTHDEWITNYADLTSCFLMGTSAGGNIVYYAGLRAAAEADNMLPLKIKGLIL 760 P ++FHGGG++L ++ T + F +++ + VVV+VDYRLAPE PA DD EAL + D N + + G+SAGGNI + AA N PL ++ L++ Sbjct: 101 PCFLWFHGGGWVLGNINTE--NSFATHMCEQAKCVVVNVDYRLAPEDPFPACIDDGWEALLYCYENADTLGINPNKIA---VGGSSAGGNIAAVLSHKVAASPANFPPLVLQLLVV 211 The following BLAST results are available for this feature:
BLAST of FC925370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925370 ID=FC925370; Name=FC925370; organism=Citrus clementina; type=EST; length=794bpback to top |