FC925376

Overview
NameFC925376
Unique NameFC925376
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length170
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3802 contig Ccv1_Contig3802:360..529. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925376 vs. ExPASy Swiss-Prot
Match: ANXD1_ARATH (Annexin D1 OS=Arabidopsis thaliana GN=ANN1 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.008e-15
Identity = 38/54 (70.37%), Postives = 45/54 (83.33%), Query Frame = 1
Query:    4 KMWTSNIQVLREIACTMSAKLLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLL 165
            K WTS+ QVL E+ACT ++  LL ARQAYHAR+KKSLEEDV +HT GDFRKLL+
Sbjct:   97 KRWTSSNQVLMEVACTRTSTQLLHARQAYHARYKKSLEEDVAHHTTGDFRKLLV 150          
BLAST of FC925376 vs. ExPASy Swiss-Prot
Match: ANXD7_ARATH (Annexin D7 OS=Arabidopsis thaliana GN=ANNAT7 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.744e-13
Identity = 37/55 (67.27%), Postives = 42/55 (76.36%), Query Frame = 1
Query:    4 KMWTSNIQVLREIACTMSAKLLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLP 168
            KM+T N  VL EIACT SA  L  A+QAY AR+K SLEEDV YHT+GD RKLL+P
Sbjct:   97 KMFTKNNWVLVEIACTRSALELFNAKQAYQARYKTSLEEDVAYHTSGDIRKLLVP 151          
BLAST of FC925376 vs. ExPASy Swiss-Prot
Match: ANXD2_ARATH (Annexin D2 OS=Arabidopsis thaliana GN=ANN2 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.779e-12
Identity = 35/55 (63.64%), Postives = 42/55 (76.36%), Query Frame = 1
Query:    4 KMWTSNIQVLREIACTMSAKLLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLP 168
            KM+T N  VL EIACT  A  L++ +QAY AR+KKS+EEDV  HT+GD RKLLLP
Sbjct:   97 KMFTKNNWVLVEIACTRPALELIKVKQAYQARYKKSIEEDVAQHTSGDLRKLLLP 151          
BLAST of FC925376 vs. ExPASy Swiss-Prot
Match: ANXD6_ARATH (Annexin D6 OS=Arabidopsis thaliana GN=ANN6 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.759e-12
Identity = 32/55 (58.18%), Postives = 41/55 (74.55%), Query Frame = 1
Query:    4 KMWTSNIQVLREIACTMSAKLLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLP 168
            K++T NI VL EIACT  +    + +QAYH R+K SLEEDV YHT+G+ RKLL+P
Sbjct:   97 KLFTKNIWVLVEIACTRPSLEFFKTKQAYHVRYKTSLEEDVAYHTSGNIRKLLVP 151          
The following BLAST results are available for this feature:
BLAST of FC925376 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
ANXD1_ARATH1.008e-1570.37Annexin D1 OS=Arabidopsis thaliana GN=ANN1 PE=1 SV... [more]
ANXD7_ARATH2.744e-1367.27Annexin D7 OS=Arabidopsis thaliana GN=ANNAT7 PE=2 ... [more]
ANXD2_ARATH1.779e-1263.64Annexin D2 OS=Arabidopsis thaliana GN=ANN2 PE=2 SV... [more]
ANXD6_ARATH6.759e-1258.18Annexin D6 OS=Arabidopsis thaliana GN=ANN6 PE=2 SV... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP8YI11FM1 TF Citrus clementina cDNA clone KN0AAP8YI11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925376 ID=FC925376; Name=FC925376; organism=Citrus clementina; type=EST; length=170bp
GCTAAGATGTGGACTTCTAACATCCAGGTTCTTAGGGAAATTGCATGCAC
CATGTCTGCGAAGCTATTGCTCGAAGCAAGGCAGGCTTATCATGCTCGTT
TTAAGAAGTCCCTTGAAGAGGATGTTGGTTATCACACTAATGGGGACTTC
CGCAAGCTTTTGCTACCCCT
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