FC925394

Overview
NameFC925394
Unique NameFC925394
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length648
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC925394_ssr358 microsatellite FC925394_ssr358:358..372. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig14827 contig Ccv1_Contig14827:218..865. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925394 vs. ExPASy Swiss-Prot
Match: SAP3_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Arabidopsis thaliana GN=SAP3 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 6.165e-42
Identity = 86/156 (55.13%), Postives = 98/156 (62.82%), Query Frame = 1
Query:  190 MAEEHRCQAPRLCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSAKHALNQTLIXXXXXXXXXXVDLSLRERPATDXXXXXXXXXXXXXXXXXXQSTAA----NRCITCRRRVGLTGFKCKCGSVFCGTHRYPEQHACSFDFKKMGKELIAKANP 645
            MAEEHR Q PRLC NNCGFFGS  TQNLCSKCFRDLQ + Q SS+AKHAL Q+L             +S    P  D                  ++        RC+TCRRRVG+TGF+C+CG VFCGTHRY EQH CSFDFK+MGK+ IAKANP
Sbjct:    1 MAEEHRLQEPRLCANNCGFFGSTATQNLCSKCFRDLQHQEQNSSTAKHALTQSLAAVGAAASS---SVSPPPPPPADSKEIVEAKSEKRAAAEPEEADGPPQDPKRCLTCRRRVGITGFRCRCGFVFCGTHRYAEQHECSFDFKRMGKDKIAKANP 153          
BLAST of FC925394 vs. ExPASy Swiss-Prot
Match: SAP6_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Arabidopsis thaliana GN=SAP6 PE=2 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 3.871e-36
Identity = 79/160 (49.38%), Postives = 91/160 (56.88%), Query Frame = 1
Query:  190 MAEEHRCQAP---RLCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQ-SSSAKHALNQTLIXXXXXXXXXXVDLS----LRERPATDXXXXXXXXXXXXXXXXXXQSTAANRCITCRRRVGLTGFKCKCGSVFCGTHRYPEQHACSFDFKKMGKELIAKANP 645
            MAEEHRCQ P   RLCVNNCGF GS  T NLCS C+ DL LK QQ SSS K  +  +L           +       L + P+                    Q    NRC TCR+RVGLTGFKC+CG++FCG HRYPE H CS+DFK  G+E IAKANP
Sbjct:    1 MAEEHRCQTPESNRLCVNNCGFLGSSATMNLCSNCYGDLCLKQQQQSSSIKSTVESSLSVSPPSSSSSEISSPIIPPLLKNPSVKLEVPEKKAVISLPTTEQNQQQRPNRCTTCRKRVGLTGFKCRCGTMFCGVHRYPEIHGCSYDFKSAGREEIAKANP 160          
BLAST of FC925394 vs. ExPASy Swiss-Prot
Match: SAP4_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Arabidopsis thaliana GN=SAP4 PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.245e-34
Identity = 76/155 (49.03%), Postives = 88/155 (56.77%), Query Frame = 1
Query:  190 MAEEHRCQAP---RLCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSAKHALNQTLIXXXXXXXXXXVDLSLRERPATDXXXXXXXXXXXXXXXXXXQSTAANRCITCRRRVGLTGFKCKCGSVFCGTHRYPEQHACSFDFKKMGKELIAKANP 645
            MAEEHRC+ P   RLCVNNCGFFGS  T NLCS C+ DL LK QQ +S K  +  +L              +  E P T                   Q    NRC  CR+RVGLTGF C+CG+ FCG+HRYPE H C+FDFK  G+E IAKANP
Sbjct:    1 MAEEHRCETPEGHRLCVNNCGFFGSSATMNLCSNCYGDLCLKQQQQASMKSTVESSLSPVIAPVLENYA--AELEIPTTKKTEEKKPIQIPTEQPSPPQRP--NRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGREEIAKANP 151          
BLAST of FC925394 vs. ExPASy Swiss-Prot
Match: SAP1_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Arabidopsis thaliana GN=SAP1 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 6.395e-31
Identity = 61/143 (42.66%), Postives = 83/143 (58.04%), Query Frame = 1
Query:  217 PRLCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSAKHALNQTLIXXXXXXXXXXVDLSLRERPATDXXXXXXXXXXXXXXXXXXQSTAANRCITCRRRVGLTGFKCKCGSVFCGTHRYPEQHACSFDFKKMGKELIAKANP 645
            P+LCV  CGFFGSP+  NLCSKC+RD++   +Q++SAK A+ ++L                +    +                     + A RC++C ++VG+TGFKC+CGS FCGTHRYPE H C FDFK + +E IAKANP
Sbjct:   16 PKLCVKGCGFFGSPSNMNLCSKCYRDIRATEEQTASAKAAVEKSLNPNKPKTQPQQSQEITQGVLGSGSSSSSTRGGDSAAAPLDPPKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVAREAIAKANP 158          
BLAST of FC925394 vs. ExPASy Swiss-Prot
Match: SAP7_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Arabidopsis thaliana GN=SAP7 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.414e-30
Identity = 64/150 (42.67%), Postives = 84/150 (56.00%), Query Frame = 1
Query:  217 PRLCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSAKHALNQTLIXXXXXXXXXXVDLSLRERPA-------TDXXXXXXXXXXXXXXXXXXQSTAANRCITCRRRVGLTGFKCKCGSVFCGTHRYPEQHACSFDFKKMGKELIAKANP 645
            P+LC N CGFFGSP+  NLCSKC+R L+ +  Q++ AK A+  +L               L  +PA       T                        NRC +C ++VG+ GFKCKCGS FCG+HRYPE+H CSFDFK++G++ IAKANP
Sbjct:   16 PKLCDNGCGFFGSPSNMNLCSKCYRSLRAEEDQTAVAKAAVKNSLKLPSCSIIAPGQKHPLEIKPAHLETVVVTAEPSSVPVAAEQDEAEPSRPVRPNNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGRDAIAKANP 165          
BLAST of FC925394 vs. ExPASy Swiss-Prot
Match: SAP5_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Oryza sativa subsp. japonica GN=SAP5 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 8.643e-28
Identity = 66/155 (42.58%), Postives = 82/155 (52.90%), Query Frame = 1
Query:  190 MAEEHRCQ--APRLCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSAKHALNQTLIXXXXXXXXXXVDLSLRERPATDXXXXXXXXXXXXXXXXXXQSTA-ANRCITCRRRVGLTGFKCKCGSVFCGTHRYPEQHACSFDFKKMGKELIAKANP 645
            MAEE R Q    RLC NNCGFFGSP T +LCSKC+RD Q +   +     A                   +    P++                    + A A+RC +CR+RVGLTGF C+CG  FCG HRYPE+HAC FDFK  G++ IA+ANP
Sbjct:    1 MAEEQRWQEGCHRLCANNCGFFGSPATLDLCSKCYRDRQGRESTAPVVVAAAASAC------------PATHPSSPSSSSCPAFLPSSTAAEAGVVVAAVAKASRCASCRKRVGLTGFACRCGGTFCGAHRYPERHACGFDFKAAGRDAIARANP 143          
BLAST of FC925394 vs. ExPASy Swiss-Prot
Match: SAP9_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Arabidopsis thaliana GN=SAP9 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.290e-27
Identity = 59/154 (38.31%), Postives = 83/154 (53.90%), Query Frame = 1
Query:  199 EHRCQAPRLCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSAKHALNQTLIXXXXXXXXXXVDLSL-----RERPATDXXXXXXXXXXXXXXXXXXQSTAANRCITCRRRVGLTGFKCKCGSVFCGTHRYPEQHACSFDFKKMGKELIAKANP 645
            + +   P+LCV  CGFFGSP+  +LCSKC+R +  +  Q++ AK A+ ++               ++      E+ A                    +    NRC+ C ++VG+ GFKCKCGS FCG HRYPE H CSFDFK++G+  IAKANP
Sbjct:   13 QSQASEPKLCVKGCGFFGSPSNMDLCSKCYRGICAEEAQTAVAKAAVEKSFKPSPPRSLFIAEPPAVVVEPKPEKAAVVVVSAEPSSSAVPEANEPSRPARTNRCLCCNKKVGIMGFKCKCGSTFCGEHRYPETHDCSFDFKEVGRGEIAKANP 166          
BLAST of FC925394 vs. ExPASy Swiss-Prot
Match: SAP6_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Oryza sativa subsp. japonica GN=SAP6 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 9.556e-27
Identity = 65/160 (40.62%), Postives = 85/160 (53.12%), Query Frame = 1
Query:  187 KMAEE---HRCQAPRLCVNNCGFFGSPTTQNLCSKCFRD-LQLKAQQSSSAKHALNQTLIXXXXXXXXXXVDLSLRERPATDXXXXXXXXXXXXXXXXXXQSTA---ANRCITCRRRVGLTGFKCKCGSVFCGTHRYPEQHACSFDFKKMGKELIAKANP 645
            K AEE   H  +AP LCVNNCGFFGS  T+N+CSKC+RD ++ K   +   K  L                  SL   P                     + T    +NRC++CR++VGLTGFKC+CG  FC  HRY + H C+FD+K++G+E IAK NP
Sbjct:    8 KEAEETGVHTPEAPILCVNNCGFFGSRMTENMCSKCYRDTVKAKTVATVVEKKPL-----------------ASLSSTPLVTEVTDGGSGSVADGKQVMEEDTPKPPSNRCLSCRKKVGLTGFKCRCGGTFCSMHRYADSHKCTFDYKQVGREQIAKQNP 150          
BLAST of FC925394 vs. ExPASy Swiss-Prot
Match: SAP9_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Oryza sativa subsp. japonica GN=SAP9 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.780e-26
Identity = 59/148 (39.86%), Postives = 78/148 (52.70%), Query Frame = 1
Query:  202 HRCQAPRLCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSAKHALNQTLIXXXXXXXXXXVDLSLRERPATDXXXXXXXXXXXXXXXXXXQSTAANRCITCRRRVGLTGFKCKCGSVFCGTHRYPEQHACSFDFKKMGKELIAKANP 645
            H  +AP LCVNNCGFFGS  T N+CSKC+RD     + ++ A   + +                   E PA                        +NRC++CR++VGLTGF+C+CG  FC THRY E H C+FD+KK G++ IAK NP
Sbjct:   15 HTPEAPILCVNNCGFFGSSMTNNMCSKCYRDF---VKVTTMAAPVVEKKAFTPASSSKTPLEPAKPDEVPAA--------AVEDKQAAQEPPKPPSNRCLSCRKKVGLTGFQCRCGGTFCSTHRYTEAHDCTFDYKKAGRDQIAKQNP 151          
BLAST of FC925394 vs. ExPASy Swiss-Prot
Match: SAP2_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Arabidopsis thaliana GN=SAP2 PE=2 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 4.743e-26
Identity = 58/156 (37.18%), Postives = 86/156 (55.13%), Query Frame = 1
Query:  211 QAPRLCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQ----------SSSAKHALNQTLIXXXXXXXXXXVD-LSLRERPATDXXXXXXXXXXXXXXXXXXQSTAANRCITCRRRVGLTGFKCKCGSVFCGTHRYPEQHACSFDFKKMGKELIAKANP 645
            + P+LC NNCGFFGS  T N+CSKC +D+  + +Q          +SS+ + + +T            V+ +++  +P++                   +    +RC TC +RVGLTGFKC+CGS+FCGTHRY + H CSF++    +E IAKANP
Sbjct:   13 EGPKLCTNNCGFFGSAATMNMCSKCHKDMLFQQEQGAKFASAVSGTSSSSNIIKETFTAALVDIETKSVEPMTVSVQPSS-----VQVVAEVVAPEEAAKPKGPSRCTTCNKRVGLTGFKCRCGSLFCGTHRYADVHDCSFNYHAAAQEAIAKANP 163          
The following BLAST results are available for this feature:
BLAST of FC925394 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
SAP3_ARATH6.165e-4255.13Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP6_ARATH3.871e-3649.38Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP4_ARATH1.245e-3449.03Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP1_ARATH6.395e-3142.66Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP7_ARATH5.414e-3042.67Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP5_ORYSJ8.643e-2842.58Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP9_ARATH4.290e-2738.31Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP6_ORYSJ9.556e-2740.63Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP9_ORYSJ2.780e-2639.86Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP2_ARATH4.743e-2637.18Zinc finger A20 and AN1 domain-containing stress-a... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YI20FM1 TF Citrus clementina cDNA clone KN0AAP8YI20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925394 ID=FC925394; Name=FC925394; organism=Citrus clementina; type=EST; length=648bp
TTACAGGTAACGTTAAATTTTTGTATTAGTTTCTCATAAATAGTTTTTTT
TTTTTTTTGGGTTAATCCATTAACTTGATTTCAAATAGGAATAATATGGA
TAGAATCGAAGTCTTATAAATTTTTATATTAGCTTGCAAGATTTCAATCA
ACTGATTTGGAATGGAAAATTTTGCTGTAAAGGTTGAAGATGGCGGAAGA
GCACAGATGTCAAGCACCCCGTTTGTGCGTGAACAACTGCGGATTTTTCG
GGAGCCCAACAACTCAAAATCTCTGCTCCAAATGTTTTCGCGATCTTCAG
TTGAAAGCACAACAATCTTCCTCGGCCAAACACGCCCTTAACCAAACCCT
GATTTCTTCGTCGTCGTCGTCGCCGTCGCCGTCGGTTGATTTGTCTCTGC
GCGAGAGACCGGCGACGGATGTGGAGGTAGCGGCAGAGGCGGAGAAGCCG
CCGGCTGAAGTGGCCGCTCCGGTGCAGTCGACGGCGGCGAACAGGTGCAT
AACTTGCAGGAGGCGCGTGGGGCTCACGGGGTTCAAGTGCAAGTGCGGGT
CGGTGTTCTGCGGGACCCACAGGTACCCGGAGCAGCACGCGTGCTCGTTC
GATTTCAAAAAGATGGGCAAAGAACTGATTGCGAAGGCAAATCCCTGT
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