FC925502

Overview
NameFC925502
Unique NameFC925502
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925502 vs. ExPASy Swiss-Prot
Match: MCTS1_RAT (Malignant T cell amplified sequence 1 OS=Rattus norvegicus GN=Mcts1 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 9.462e-50
Identity = 95/171 (55.56%), Postives = 123/171 (71.93%), Query Frame = 1
Query:  127 EEVSAQNQVKASVQRKIRQSIADEYPGLEPVLDDLLPKKSPLIVAKCQNHXXXXXXXXXPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLSGANIMCPGLTSPGGSLDEEVGAETPVAIMAEGKQHALAIGFTKMSAKDIKAINKGIGVDNMHYLNDGLWKME 639
            E VS   Q+K SV + I+  + +++PG+EP L+ ++PKK P+ + +C  H          LFF  R+GP+ PTLRLLH+YP I+   QVD+GAIKFVLSGANIMCPGLTSPG  L      +T VAIMAEGKQHAL +G  KMSA+DI+ +NKGIG++N+HYLNDGLW M+
Sbjct:   10 ENVSNCIQLKTSVIKGIKNQLLEQFPGIEPWLNQIMPKKDPVKIVRCHEHIEILTVNGELLFFRQREGPFYPTLRLLHKYPFILPHQQVDKGAIKFVLSGANIMCPGLTSPGAKL-YPAAVDTIVAIMAEGKQHALCVGVMKMSAEDIEKVNKGIGIENIHYLNDGLWHMK 179          
BLAST of FC925502 vs. ExPASy Swiss-Prot
Match: MCTS1_MOUSE (Malignant T cell amplified sequence 1 OS=Mus musculus GN=Mcts1 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 9.462e-50
Identity = 95/171 (55.56%), Postives = 123/171 (71.93%), Query Frame = 1
Query:  127 EEVSAQNQVKASVQRKIRQSIADEYPGLEPVLDDLLPKKSPLIVAKCQNHXXXXXXXXXPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLSGANIMCPGLTSPGGSLDEEVGAETPVAIMAEGKQHALAIGFTKMSAKDIKAINKGIGVDNMHYLNDGLWKME 639
            E VS   Q+K SV + I+  + +++PG+EP L+ ++PKK P+ + +C  H          LFF  R+GP+ PTLRLLH+YP I+   QVD+GAIKFVLSGANIMCPGLTSPG  L      +T VAIMAEGKQHAL +G  KMSA+DI+ +NKGIG++N+HYLNDGLW M+
Sbjct:    9 ENVSNCIQLKTSVIKGIKNQLLEQFPGIEPWLNQIMPKKDPVKIVRCHEHIEILTVNGELLFFRQREGPFYPTLRLLHKYPFILPHQQVDKGAIKFVLSGANIMCPGLTSPGAKL-YPAAVDTIVAIMAEGKQHALCVGVMKMSAEDIEKVNKGIGIENIHYLNDGLWHMK 178          
BLAST of FC925502 vs. ExPASy Swiss-Prot
Match: MCTS1_HUMAN (Malignant T cell amplified sequence 1 OS=Homo sapiens GN=MCTS1 PE=1 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 9.462e-50
Identity = 95/171 (55.56%), Postives = 123/171 (71.93%), Query Frame = 1
Query:  127 EEVSAQNQVKASVQRKIRQSIADEYPGLEPVLDDLLPKKSPLIVAKCQNHXXXXXXXXXPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLSGANIMCPGLTSPGGSLDEEVGAETPVAIMAEGKQHALAIGFTKMSAKDIKAINKGIGVDNMHYLNDGLWKME 639
            E VS   Q+K SV + I+  + +++PG+EP L+ ++PKK P+ + +C  H          LFF  R+GP+ PTLRLLH+YP I+   QVD+GAIKFVLSGANIMCPGLTSPG  L      +T VAIMAEGKQHAL +G  KMSA+DI+ +NKGIG++N+HYLNDGLW M+
Sbjct:    9 ENVSNCIQLKTSVIKGIKNQLIEQFPGIEPWLNQIMPKKDPVKIVRCHEHIEILTVNGELLFFRQREGPFYPTLRLLHKYPFILPHQQVDKGAIKFVLSGANIMCPGLTSPGAKL-YPAAVDTIVAIMAEGKQHALCVGVMKMSAEDIEKVNKGIGIENIHYLNDGLWHMK 178          
BLAST of FC925502 vs. ExPASy Swiss-Prot
Match: MCTS1_BOVIN (Malignant T cell amplified sequence 1 OS=Bos taurus GN=MCTS1 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 9.462e-50
Identity = 95/171 (55.56%), Postives = 123/171 (71.93%), Query Frame = 1
Query:  127 EEVSAQNQVKASVQRKIRQSIADEYPGLEPVLDDLLPKKSPLIVAKCQNHXXXXXXXXXPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLSGANIMCPGLTSPGGSLDEEVGAETPVAIMAEGKQHALAIGFTKMSAKDIKAINKGIGVDNMHYLNDGLWKME 639
            E VS   Q+K SV + I+  + +++PG+EP L+ ++PKK P+ + +C  H          LFF  R+GP+ PTLRLLH+YP I+   QVD+GAIKFVLSGANIMCPGLTSPG  L      +T VAIMAEGKQHAL +G  KMSA+DI+ +NKGIG++N+HYLNDGLW M+
Sbjct:    9 ENVSNCIQLKTSVIKGIKNQLIEQFPGIEPWLNQIMPKKDPVKIVRCHEHIEILTVNGELLFFRQREGPFYPTLRLLHKYPFILPHQQVDKGAIKFVLSGANIMCPGLTSPGAKL-YPAAVDTIVAIMAEGKQHALCVGVMKMSAEDIEKVNKGIGIENIHYLNDGLWHMK 178          
BLAST of FC925502 vs. ExPASy Swiss-Prot
Match: MCS1A_XENLA (Malignant T cell amplified sequence 1-A OS=Xenopus laevis GN=mcts1-A PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 9.462e-50
Identity = 97/171 (56.73%), Postives = 122/171 (71.35%), Query Frame = 1
Query:  127 EEVSAQNQVKASVQRKIRQSIADEYPGLEPVLDDLLPKKSPLIVAKCQNHXXXXXXXXXPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLSGANIMCPGLTSPGGSLDEEVGAETPVAIMAEGKQHALAIGFTKMSAKDIKAINKGIGVDNMHYLNDGLWKME 639
            E VS   Q+K SV + I+  + D++PG+E  L+ ++PKK P+ + +C  H          LFF  R+GP+ PTLRLLH+YP I+   QVD+GAIKFVLSGANIMCPGLTSPG  L     A+T VAIMAEGKQHAL +G  KMSA DI+ INKGIG++N+HYLNDGLW M+
Sbjct:    9 ENVSNCIQLKTSVIKGIKNQLIDQFPGIEQWLNQIMPKKDPVKIVRCHEHIEILTVNGELLFFRQREGPFYPTLRLLHKYPFILPHQQVDKGAIKFVLSGANIMCPGLTSPGAKL-YPAAADTVVAIMAEGKQHALCVGVMKMSADDIEKINKGIGIENIHYLNDGLWHMK 178          
BLAST of FC925502 vs. ExPASy Swiss-Prot
Match: MCTS1_DICDI (Malignant T cell amplified sequence 1 homolog OS=Dictyostelium discoideum GN=mcts1 PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 6.133e-49
Identity = 91/171 (53.22%), Postives = 119/171 (69.59%), Query Frame = 1
Query:  136 SAQNQVKASVQRKIRQSIADEYPGLEPVLDDLLPKKSPLIVAKCQNHXXXXXXXXXPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLSGANIMCPGLTSPGGSLDEEVGAETPVAIMAEGKQHALAIGFTKMSAKDIKAINKGIGVDNMHYLNDGLWKMERLE 648
            +  NQ+K+S+QR I+ SI  +YP L+ + +D+ PKK P++  KCQNH          LFFN R+GPY PTLR LH+YPNI+  +QVD+GAIKFVL GANIMC GLTSPG  ++ ++  +  VA+MAEGK HA AIG  KMS  DI+ IN  IG++N+HYL D L+    LE
Sbjct:   12 NTNNQIKSSLQRNIKNSILAQYPKLKDIEEDVFPKKVPIVQVKCQNHINLVLINNEVLFFNEREGPYYPTLRFLHKYPNILPHVQVDKGAIKFVLQGANIMCRGLTSPGAKMEVDLPVDAIVAVMAEGKDHASAIGVMKMSTNDIRTINNDIGINNIHYLGDSLYMSPNLE 182          
BLAST of FC925502 vs. ExPASy Swiss-Prot
Match: MCTS2_MOUSE (Malignant T cell amplified sequence 2 OS=Mus musculus GN=Mcts2 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.366e-48
Identity = 93/171 (54.39%), Postives = 121/171 (70.76%), Query Frame = 1
Query:  127 EEVSAQNQVKASVQRKIRQSIADEYPGLEPVLDDLLPKKSPLIVAKCQNHXXXXXXXXXPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLSGANIMCPGLTSPGGSLDEEVGAETPVAIMAEGKQHALAIGFTKMSAKDIKAINKGIGVDNMHYLNDGLWKME 639
            E VS   Q+K SV + I+  + +++PG+EP L+ ++PKK P+ + +C  H          LFF  R GP+ PTLRLLH+YP I+   QVD+GAIKFVLSGANIMCPGLTSPG  L      +T VA+MAEGK+HAL +G  KM+A DI+ INKGIG++N+HYLNDGLW M+
Sbjct:    9 ESVSNCIQLKTSVIKGIKSQLTEQFPGIEPWLNQIMPKKDPVKIVRCHEHMEILTVNGELLFFRQRKGPFYPTLRLLHKYPFILPHQQVDKGAIKFVLSGANIMCPGLTSPGAKL-YTAAVDTIVAVMAEGKEHALCVGVMKMAAADIEKINKGIGIENIHYLNDGLWHMK 178          
BLAST of FC925502 vs. ExPASy Swiss-Prot
Match: MCTS1_XENTR (Malignant T cell amplified sequence 1 OS=Xenopus tropicalis GN=mcts1 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.366e-48
Identity = 95/171 (55.56%), Postives = 121/171 (70.76%), Query Frame = 1
Query:  127 EEVSAQNQVKASVQRKIRQSIADEYPGLEPVLDDLLPKKSPLIVAKCQNHXXXXXXXXXPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLSGANIMCPGLTSPGGSLDEEVGAETPVAIMAEGKQHALAIGFTKMSAKDIKAINKGIGVDNMHYLNDGLWKME 639
            E VS   Q+K SV + I+  + D++P +E  L+ ++PKK P+ + +C  H          LFF  R+GP+ PTLRLLH+YP I+   QVD+GAIKFVLSGANIMCPGLTSPG  L     A+T VAIMAEGKQHAL +G  KMSA DI+ +NKGIG++N+HYLNDGLW M+
Sbjct:    9 ENVSNCIQLKTSVIKGIKNQLIDQFPVIEQWLNQIMPKKDPVKIVRCHEHIEILTVNGELLFFRQREGPFYPTLRLLHKYPFILPHQQVDKGAIKFVLSGANIMCPGLTSPGAKL-YPAAADTVVAIMAEGKQHALCVGVMKMSADDIEKVNKGIGIENIHYLNDGLWHMK 178          
BLAST of FC925502 vs. ExPASy Swiss-Prot
Match: MCS1B_XENLA (Malignant T cell amplified sequence 1-B OS=Xenopus laevis GN=mcts1-b PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.192e-48
Identity = 95/171 (55.56%), Postives = 120/171 (70.18%), Query Frame = 1
Query:  127 EEVSAQNQVKASVQRKIRQSIADEYPGLEPVLDDLLPKKSPLIVAKCQNHXXXXXXXXXPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLSGANIMCPGLTSPGGSLDEEVGAETPVAIMAEGKQHALAIGFTKMSAKDIKAINKGIGVDNMHYLNDGLWKME 639
            E VS   Q+K SV + I+  + D++P +E  L+ ++PKK P+ + +C  H          LFF  R+G + PTLRLLH+YP I+   QVD+GAIKFVLSGANIMCPGLTSPG  L     AET VAIMAEGKQHAL +G  KMSA DI+ +NKGIG++N+HYLNDGLW M+
Sbjct:    9 ENVSNCIQLKTSVIKGIKNQLIDQFPVIEQWLNQIMPKKDPVKIVRCHEHIEILTVNGELLFFRQREGSFYPTLRLLHKYPFILPHQQVDKGAIKFVLSGANIMCPGLTSPGAKL-YPAAAETVVAIMAEGKQHALCVGVMKMSADDIEKVNKGIGIENIHYLNDGLWHMK 178          
BLAST of FC925502 vs. ExPASy Swiss-Prot
Match: MCTS1_CHICK (Malignant T cell amplified sequence 1 OS=Gallus gallus GN=MCTS1 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 6.781e-48
Identity = 94/171 (54.97%), Postives = 120/171 (70.18%), Query Frame = 1
Query:  127 EEVSAQNQVKASVQRKIRQSIADEYPGLEPVLDDLLPKKSPLIVAKCQNHXXXXXXXXXPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLSGANIMCPGLTSPGGSLDEEVGAETPVAIMAEGKQHALAIGFTKMSAKDIKAINKGIGVDNMHYLNDGLWKME 639
            E VS   Q+K SV + I+  + D++P +EP L+ ++PKK P+ + +C  H          LFF  R+G + PTLRLLH+YP I+   QVD+GAIKFVLSGANIMCPGLTSPG  L      +T VAIMAEGKQHAL +G  KMSA DI+ +NKGIG++N+HYLNDGLW M+
Sbjct:    9 ENVSNCIQLKTSVIKGIKNQLIDQFPVIEPWLNQIMPKKDPVKIVRCHEHIEILTVNGELLFFRQREGIFYPTLRLLHKYPFILPHQQVDKGAIKFVLSGANIMCPGLTSPGAKL-YPAAVDTVVAIMAEGKQHALCVGVMKMSADDIEKVNKGIGIENIHYLNDGLWHMK 178          
The following BLAST results are available for this feature:
BLAST of FC925502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
MCTS1_RAT9.462e-5055.56Malignant T cell amplified sequence 1 OS=Rattus no... [more]
MCTS1_MOUSE9.462e-5055.56Malignant T cell amplified sequence 1 OS=Mus muscu... [more]
MCTS1_HUMAN9.462e-5055.56Malignant T cell amplified sequence 1 OS=Homo sapi... [more]
MCTS1_BOVIN9.462e-5055.56Malignant T cell amplified sequence 1 OS=Bos tauru... [more]
MCS1A_XENLA9.462e-5056.73Malignant T cell amplified sequence 1-A OS=Xenopus... [more]
MCTS1_DICDI6.133e-4953.22Malignant T cell amplified sequence 1 homolog OS=D... [more]
MCTS2_MOUSE1.366e-4854.39Malignant T cell amplified sequence 2 OS=Mus muscu... [more]
MCTS1_XENTR1.366e-4855.56Malignant T cell amplified sequence 1 OS=Xenopus t... [more]
MCS1B_XENLA5.192e-4855.56Malignant T cell amplified sequence 1-B OS=Xenopus... [more]
MCTS1_CHICK6.781e-4854.97Malignant T cell amplified sequence 1 OS=Gallus ga... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YJ07FM1 TF Citrus clementina cDNA clone KN0AAP3YJ07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925502 ID=FC925502; Name=FC925502; organism=Citrus clementina; type=EST; length=709bp
CGGCAAAAGAGCATTTCAAGCAAGGAGAAGAGAGGCTTTAGATCGAACCC
AACACACCAAAATCCTTCTACTTCAGTATTTCAAGCTTTTTTCTTCAAAA
CAACAATGTTCAAAAAGTTTTCGGCGGAAGAAGTGTCGGCACAGAACCAA
GTCAAGGCATCTGTCCAGCGCAAAATTCGGCAAAGCATTGCAGATGAGTA
CCCAGGACTTGAGCCAGTGTTGGATGATTTGCTTCCTAAGAAGTCTCCTC
TGATTGTTGCTAAATGTCAAAATCATCTGAATCTCGTTCTGGTGAATAAT
GTTCCGTTGTTTTTCAATATCCGTGACGGGCCTTACATGCCTACGCTAAG
GCTCCTTCATCAATATCCAAATATAATGAAGAAGTTACAAGTAGACCGGG
GTGCCATAAAGTTTGTCCTTTCTGGTGCAAACATAATGTGCCCTGGTCTT
ACATCACCCGGTGGATCTTTGGATGAAGAAGTTGGAGCAGAAACTCCTGT
GGCCATAATGGCTGAAGGAAAGCAACATGCTCTTGCTATTGGGTTTACAA
AAATGTCAGCTAAAGACATAAAGGCAATTAACAAGGGAATCGGGGTGGAT
AACATGCATTATCTCAATGATGGCCTTTGGAAGATGGAGCGTCTAGAATG
AGGATGTGCCAAGAGCAGCAGCAGTACCCCTTCTGTAACAGAAGAAAGAA
CTAAAATTA
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