FC925505
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925505 vs. ExPASy Swiss-Prot
Match: VATC_ARATH (V-type proton ATPase subunit C OS=Arabidopsis thaliana GN=VHA-C PE=1 SV=1) HSP 1 Score: 342.813 bits (878), Expect = 9.200e-94 Identity = 169/208 (81.25%), Postives = 188/208 (90.38%), Query Frame = 3 Query: 36 MASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEHLVTLLAVVPQYSQKDWLASYETLTNYVV 659 M SRYWVVSLPV++SA+S+WNRLQEQISKHSFDTP+YRFNIPNLRVGT +KSNSFVE VS KIRRQIEELER+SG+ES++L+VDGVPVD+YLTRFVWDEAKYPTMSPL+E+VD I + VAKIEDDLKVRVAEYNN+R QLNAINRKQSGSLAVRDLSNLVKPEDI+ SEHLVTLLAVVP+YSQKDWLA YETLT+YVV Sbjct: 1 MTSRYWVVSLPVKDSASSLWNRLQEQISKHSFDTPVYRFNIPNLRVGTLDSLLALGDDLLKSNSFVEGVSQKIRRQIEELERISGVESNALTVDGVPVDSYLTRFVWDEAKYPTMSPLKEVVDNIQSQVAKIEDDLKVRVAEYNNIRGQLNAINRKQSGSLAVRDLSNLVKPEDIVESEHLVTLLAVVPKYSQKDWLACYETLTDYVV 208
BLAST of FC925505 vs. ExPASy Swiss-Prot
Match: VATC_HORVU (V-type proton ATPase subunit C OS=Hordeum vulgare GN=VATC PE=1 SV=1) HSP 1 Score: 289.656 bits (740), Expect = 9.243e-78 Identity = 144/213 (67.61%), Postives = 172/213 (80.75%), Query Frame = 3 Query: 36 MASRYWVVSLPV--QNSAA---SVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEHLVTLLAVVPQYSQKDWLASYETLTNYVV 659 MA+RYW+ +LPV N AA ++W RLQE IS+HSFDTPLYRF +P+LR GT VKSN F+E VSHKIRRQIE+LER G+E +L+VDGVPVD+YLTRFVWDE KYP +PL+E V I + VAKIEDD+KVRVAEY NV+SQL AINRKQ+GSLAVRDLSNL+KPED++TSEHLVTLL++VP+YSQKDWLASYE+L +VV Sbjct: 1 MATRYWIAALPVADDNVAAGKTALWARLQEAISRHSFDTPLYRFTVPDLRPGTLDSLLALSDDLVKSNIFIEGVSHKIRRQIEDLERAGGVEPGTLTVDGVPVDSYLTRFVWDEGKYPVNAPLKETVASIQSQVAKIEDDMKVRVAEYGNVKSQLGAINRKQTGSLAVRDLSNLIKPEDMVTSEHLVTLLSIVPKYSQKDWLASYESLDTFVV 213
BLAST of FC925505 vs. ExPASy Swiss-Prot
Match: VATC1_PONAB (V-type proton ATPase subunit C 1 OS=Pongo abelii GN=ATP6V1C1 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.816e-34 Identity = 78/208 (37.50%), Postives = 119/208 (57.21%), Query Frame = 3 Query: 42 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPQYSQKDWLASYETLTNYVV 659 + +W++S P + + W +L SK++ +FNIP+L+VGT K ++FVE V K+ + + + LE +L +GV + TY+TRF WD AKYP L+ I + I V +I++DLK R + YNN++ L + RK +GSL R L+ +VK +D ++ SE+LVTLL VVP+ + DW+ YETL VV Sbjct: 2 TEFWLISAPGEKTCQQTWEKLHAATSKNNNLAVTSKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVV 209
BLAST of FC925505 vs. ExPASy Swiss-Prot
Match: VATC1_MACFA (V-type proton ATPase subunit C 1 OS=Macaca fascicularis GN=ATP6V1C1 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.816e-34 Identity = 78/208 (37.50%), Postives = 119/208 (57.21%), Query Frame = 3 Query: 42 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPQYSQKDWLASYETLTNYVV 659 + +W++S P + + W +L SK++ +FNIP+L+VGT K ++FVE V K+ + + + LE +L +GV + TY+TRF WD AKYP L+ I + I V +I++DLK R + YNN++ L + RK +GSL R L+ +VK +D ++ SE+LVTLL VVP+ + DW+ YETL VV Sbjct: 2 TEFWLISAPGEKTCQQTWEKLHAATSKNNNLAVTSKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVV 209
BLAST of FC925505 vs. ExPASy Swiss-Prot
Match: VATC1_HUMAN (V-type proton ATPase subunit C 1 OS=Homo sapiens GN=ATP6V1C1 PE=1 SV=4) HSP 1 Score: 145.206 bits (365), Expect = 2.816e-34 Identity = 78/208 (37.50%), Postives = 119/208 (57.21%), Query Frame = 3 Query: 42 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPQYSQKDWLASYETLTNYVV 659 + +W++S P + + W +L SK++ +FNIP+L+VGT K ++FVE V K+ + + + LE +L +GV + TY+TRF WD AKYP L+ I + I V +I++DLK R + YNN++ L + RK +GSL R L+ +VK +D ++ SE+LVTLL VVP+ + DW+ YETL VV Sbjct: 2 TEFWLISAPGEKTCQQTWEKLHAATSKNNNLAVTSKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVV 209
BLAST of FC925505 vs. ExPASy Swiss-Prot
Match: VATC1_BOVIN (V-type proton ATPase subunit C 1 OS=Bos taurus GN=ATP6V1C1 PE=1 SV=3) HSP 1 Score: 143.665 bits (361), Expect = 8.192e-34 Identity = 77/208 (37.02%), Postives = 119/208 (57.21%), Query Frame = 3 Query: 42 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPQYSQKDWLASYETLTNYVV 659 + +W++S P + + W +L +K++ +FNIP+L+VGT K ++FVE V K+ + + + LE +L +GV + TY+TRF WD AKYP L+ I + I V +I++DLK R + YNN++ L + RK +GSL R L+ +VK +D ++ SE+LVTLL VVP+ + DW+ YETL VV Sbjct: 2 TEFWLISAPGEKTCQQTWEKLHAATTKNNNLAVSSKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVV 209
BLAST of FC925505 vs. ExPASy Swiss-Prot
Match: VATC1_RAT (V-type proton ATPase subunit C 1 OS=Rattus norvegicus GN=Atp6v1c1 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.070e-33 Identity = 77/208 (37.02%), Postives = 118/208 (56.73%), Query Frame = 3 Query: 42 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPQYSQKDWLASYETLTNYVV 659 + +W++S P + + W +L +K++ +FNIP+L+VGT K ++FVE V K+ + + + LE +L GV + TY+TRF WD AKYP L+ I + I V +I++DLK R + YNN++ L + RK +GSL R L+ +VK +D ++ SE+LVTLL VVP+ + DW+ YETL VV Sbjct: 2 TEFWLISAPGEKTCQQTWEKLHAATTKNNNLAVSSKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGVVKKVAQYMADVLEDSKDKVQENLLASGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVV 209
BLAST of FC925505 vs. ExPASy Swiss-Prot
Match: VATC1_MOUSE (V-type proton ATPase subunit C 1 OS=Mus musculus GN=Atp6v1c1 PE=1 SV=4) HSP 1 Score: 143.28 bits (360), Expect = 1.070e-33 Identity = 77/208 (37.02%), Postives = 118/208 (56.73%), Query Frame = 3 Query: 42 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPQYSQKDWLASYETLTNYVV 659 + +W++S P + + W +L +K++ +FNIP+L+VGT K ++FVE V K+ + + + LE +L GV + TY+TRF WD AKYP L+ I + I V +I++DLK R + YNN++ L + RK +GSL R L+ +VK +D ++ SE+LVTLL VVP+ + DW+ YETL VV Sbjct: 2 TEFWLISAPGEKTCQQTWEKLHAATTKNNNLAVSSKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGVVKKVAQYMADVLEDSKDKVQENLLASGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVV 209
BLAST of FC925505 vs. ExPASy Swiss-Prot
Match: VTC1A_DANRE (V-type proton ATPase subunit C 1-A OS=Danio rerio GN=atp6v1c1a PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.397e-33 Identity = 76/208 (36.54%), Postives = 123/208 (59.13%), Query Frame = 3 Query: 42 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPQYSQKDWLASYETLTNYVV 659 + +W++S P + + W++L ++ + + +FNIP+L+VGT K ++FVESV K+ + + + LE +L +GV + TY+TRF WD AKYP L+ I + I V++I++DLK R + YNN++ L + RK +GSL R L+++VK +D ++ SE+L+TLL VVP+ + DW +YETL VV Sbjct: 2 TEFWLISAPGEKTCQQTWDKLMTATTRTNNLSTNNKFNIPDLKVGTLDVLVGLSDELAKLDAFVESVVKKVAQYMADVLEDSRDKVQENLLANGVDLVTYVTRFQWDMAKYPIKQSLKNISEIISKQVSQIDNDLKARASAYNNLKGNLQNLERKNAGSLLTRSLADIVKKDDFVLDSEYLITLLVVVPKTNYTDWQRTYETLAEMVV 209
BLAST of FC925505 vs. ExPASy Swiss-Prot
Match: VATC1_XENLA (V-type proton ATPase subunit C 1 OS=Xenopus laevis GN=atp6v1c1 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.113e-33 Identity = 75/208 (36.06%), Postives = 120/208 (57.69%), Query Frame = 3 Query: 42 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPQYSQKDWLASYETLTNYVV 659 + +W++S P + + W +L +K++ + +FNIP+L+VGT K ++FVE K+ + + + LE +L +GV + TY+TRF WD AKYP L+ I + I V +I++DLK R + YNN++ L + RK +GSL R L+ +VK +D ++ SE+L+TLL VVP+ + DW+ YETL+ VV Sbjct: 2 TEFWLISAPGEKTCQQTWEKLMAATTKNNNLSTNAKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGAVKKVAQYMADVLEDSRDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKARASAYNNLKGNLQNLERKNAGSLITRSLAEIVKKDDFVLDSEYLITLLVVVPKNNYTDWMKEYETLSEMVV 209 The following BLAST results are available for this feature:
BLAST of FC925505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925505 ID=FC925505; Name=FC925505; organism=Citrus clementina; type=EST; length=660bpback to top |