FC925508
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925508 vs. ExPASy Swiss-Prot
Match: IAA26_ARATH (Auxin-responsive protein IAA26 OS=Arabidopsis thaliana GN=IAA26 PE=2 SV=2) HSP 1 Score: 223.402 bits (568), Expect = 7.120e-58 Identity = 116/174 (66.67%), Postives = 135/174 (77.59%), Query Frame = 3 Query: 39 KNTAVPNSSQKRTAPAPVVGWPPIRSFRKNLAGASASKLPASESPNDVPSKTVDEKPAHEPGRKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGLVNKQEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSA 560 K T+VP+ SQKRTAP PVVGWPP+RSFRKNLA S+SKL S +K+ D + E ++ FVKINMDGVPIGRKVDLNAY+SYE+LS VD+LFRGLLAAQRD S G Q EEK I G+LDG GE+TL YEDNEGD+MLVGDVPW MFVS+V RLRV+KSSE+S+ Sbjct: 87 KTTSVPHISQKRTAPGPVVGWPPVRSFRKNLASTSSSKLGNESSHGGQINKSDDGEKQVETKKEGMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRDISDG-----QGEEKPIIGLLDGKGEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSEISS 255
BLAST of FC925508 vs. ExPASy Swiss-Prot
Match: IAA7_ORYSJ (Auxin-responsive protein IAA7 OS=Oryza sativa subsp. japonica GN=IAA7 PE=2 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 4.942e-51 Identity = 103/188 (54.79%), Postives = 134/188 (71.28%), Query Frame = 3 Query: 6 EKIAFPSSAPAKNTAVPNSS---QKRTAPAPVVGWPPIRSFRKNLAGASASKLPASESPNDVPSKTVDEKPAHEPGRKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGLVNKQEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSA 560 E+ A P A N N++ Q R+ PVVGWPP+R+FR+NLA +S + L ++ + ++ PF+KINMDGVPIGRK+DLNA+DSYEKLS AVD+LFRGLLAAQRD G + Q+E+ AI+G+LDG+GEYTLVYED EGD++LVGDVPW MFVS+V RLRVLK+S++S+ Sbjct: 108 EEEAHPPPATGNNALASNNNGCFQTRSPSTPVVGWPPVRTFRRNLATSSKASLELQNGKKAAKAEEI---------KRAPFIKINMDGVPIGRKIDLNAFDSYEKLSLAVDKLFRGLLAAQRDPLTAGAKDCQQEDVAISGLLDGTGEYTLVYEDYEGDKVLVGDVPWGMFVSSVKRLRVLKTSDLSS 286
BLAST of FC925508 vs. ExPASy Swiss-Prot
Match: IAA18_ARATH (Auxin-responsive protein IAA18 OS=Arabidopsis thaliana GN=IAA18 PE=2 SV=2) HSP 1 Score: 197.978 bits (502), Expect = 3.203e-50 Identity = 110/177 (62.15%), Postives = 132/177 (74.58%), Query Frame = 3 Query: 45 TAVPNSSQKRTAPAPVVGWPPIRSFRKNLAGASASKLPA-SESPNDVPSKTVDEKPAH---EPGRKNP-FVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGLVNKQEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSA 560 ++ +S KRTAP PVVGWPP+RSFRKNLA S+SKL S + N V K A EP R+ FVKINM GVPIGRKVDL+A++SYE+LS VD+LFRGLLAAQRD + E+EK ITG+LDG+GEYTL YEDNEGD+MLVGDVPW MFVS+V RLRV+K+SE+S+ Sbjct: 82 SSTKTTSHKRTAPGPVVGWPPVRSFRKNLASGSSSKLGNDSTTSNGVTLKNQKCDAAAKTTEPKRQGGMFVKINMYGVPIGRKVDLSAHNSYEQLSFTVDKLFRGLLAAQRD-----FPSSIEDEKPITGLLDGNGEYTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKTSEISS 253
BLAST of FC925508 vs. ExPASy Swiss-Prot
Match: IAA6_ORYSJ (Auxin-responsive protein IAA6 OS=Oryza sativa subsp. japonica GN=IAA6 PE=2 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 2.538e-47 Identity = 101/180 (56.11%), Postives = 125/180 (69.44%), Query Frame = 3 Query: 21 PSSAPAKNTAVPNSSQKRTAPAPVVGWPPIRSFRKNLAGASASK-LPASESPNDVPSKTVDEKPAHEPGRKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGLVNKQEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVS 557 P APA +Q R A APVVGWPPIRSFR+NLA +S+SK P ++ N T+ K KNP VKINMDG+PIGRK+DL AY+SY+ LS+AV +LF G L AQ+D + + + ++K +LDGSGEYTLVYED+EGDRMLVGDVPW +FVST RLRVL+SSE+S Sbjct: 153 PHGAPATPARNRPQTQGRGAAAPVVGWPPIRSFRRNLASSSSSKHSPEPQNDNANAKVTLTCK-------KNPLVKINMDGIPIGRKIDLAAYNSYDGLSSAVKQLFHGFLQAQKDQTNAQIAQQGADDKIFYQLLDGSGEYTLVYEDSEGDRMLVGDVPWKVFVSTAKRLRVLRSSELS 325
BLAST of FC925508 vs. ExPASy Swiss-Prot
Match: IAA18_ORYSJ (Auxin-responsive protein IAA18 OS=Oryza sativa subsp. japonica GN=IAA18 PE=2 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 2.806e-46 Identity = 99/176 (56.25%), Postives = 122/176 (69.32%), Query Frame = 3 Query: 27 SAPAKNTAVPNSSQKRTAPAPVVGWPPIRSFRKNLAGASASKLPASESPNDVPSKTVDEKPAHEPGRKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGLVNKQEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEV 554 S P A ++ Q R A PVVGWPPIRSFR+NL S+ K + E ND D+K A +K P VKINMDG+PIGRKVDL YDSY+KLS+AV+ELFRG L AQ+D S + E+K +G+LDG+G YTLVYEDN+GDRML GD+PW +FVSTV RLRV++ SE+ Sbjct: 147 SPPCSAAAHSSNPQGRGAIPPVVGWPPIRSFRRNLTNGSSFK-QSPERQND----EADDK-AKPICKKRPLVKINMDGIPIGRKVDLQIYDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQGAEDKIFSGLLDGTGVYTLVYEDNDGDRMLAGDIPWKVFVSTVKRLRVMRRSEL 316
BLAST of FC925508 vs. ExPASy Swiss-Prot
Match: IAA2_ORYSJ (Auxin-responsive protein IAA2 OS=Oryza sativa subsp. japonica GN=IAA2 PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.540e-44 Identity = 97/180 (53.89%), Postives = 117/180 (65.00%), Query Frame = 3 Query: 15 AFPSSAPAKNTAVPNSSQKRTAPAPVVGWPPIRSFRKNLAGASASKLPASESPNDVPSKTVDEKPAHEPGRKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGLVNKQEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEV 554 A P+ A N + A APVVGWPP+RSFR+NLA +S+S + P + D+ K FVKINMDGVPIGRKVDL AY Y +LSAAVD+LFRGLLAAQ ++ G E + A G + G GEYTLVYED+EGDRMLVGDVPW MF++T RLRVLKSS++ Sbjct: 46 AAPAFALRSNGTNASKPSGAAAAAPVVGWPPVRSFRRNLASSSSSSSKQAPPPPSSSPQNGDKASKDGGAEKGMFVKINMDGVPIGRKVDLAAYGGYAQLSAAVDKLFRGLLAAQSAAADG------EADAAAAGEMVGGGEYTLVYEDDEGDRMLVGDVPWQMFIATAKRLRVLKSSDL 219
BLAST of FC925508 vs. ExPASy Swiss-Prot
Match: IAA16_ORYSJ (Auxin-responsive protein IAA16 OS=Oryza sativa subsp. japonica GN=IAA16 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 4.480e-44 Identity = 102/188 (54.26%), Postives = 129/188 (68.62%), Query Frame = 3 Query: 24 SSAPAKNTAVPNSSQKRTAPA-PVVGWPPIRSFRKNLAGASASKLPASESPNDVPSKTVDEKPAHEPGRKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRD-------SSAGGLVNKQEEEKAITGVLD-GSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSA 560 +++ A + A N K + PA PVVGWPP+RSFR+NLA +S+S P P D A G+ FVK+NMDGVPIGRKVDL A+ Y +LSAAVD LFRGLLAAQRD ++A + EE+AI G+LD GSGEYTLVYED+EGD+MLVGDVPW+MF++ RLRVL+SS+++A Sbjct: 35 NTSTAADGAKGNDGFKASRPAAPVVGWPPVRSFRRNLASSSSSSKP--------PRGGRDAAAAATGGKVARFVKVNMDGVPIGRKVDLAAHGGYGELSAAVDRLFRGLLAAQRDPTMATAAAAAAAGESCTGEEEAIAGLLDGGSGEYTLVYEDDEGDQMLVGDVPWNMFIAAARRLRVLRSSDLNA 214
BLAST of FC925508 vs. ExPASy Swiss-Prot
Match: IAA28_ARATH (Auxin-responsive protein IAA28 OS=Arabidopsis thaliana GN=IAA28 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.819e-30 Identity = 77/171 (45.03%), Postives = 100/171 (58.48%), Query Frame = 3 Query: 63 SQKRTAPAPVVGWPPIRSFRKNLAGASASKLPASESPNDVPSKTVDEKPAHEPGRKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGLVNKQEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSALSREK 575 S R APVVGWPP+RS R+NL ++ ES + K +VKINM+GVPIGRKV+L+AY++Y++LS AVD+LF +++DS D + +YTLVYED EGD++LVGDVPW MFVSTV RL VLK+S +LS K Sbjct: 40 SNNRVEVAPVVGWPPVRSSRRNLTAQLKEEMKKKESDEE----------------KELYVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLF-----SKKDS------------------WDLNRQYTLVYEDTEGDKVLVGDVPWEMFVSTVKRLHVLKTSHAFSLSPRK 171
BLAST of FC925508 vs. ExPASy Swiss-Prot
Match: IAA27_ARATH (Auxin-responsive protein IAA27 OS=Arabidopsis thaliana GN=IAA27 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 3.682e-30 Identity = 80/189 (42.33%), Postives = 111/189 (58.73%), Query Frame = 3 Query: 48 AVPNSSQKRTAPAP-----VVGWPPIRSFRKNLAGASASKLPASESPND-VPSKTVDEKPAHEPGRKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGLVNKQEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSALS---REKCRTR 587 AVP +K +A AP VVGWPPIRSFRKN +S S+ P + S + +K+ E+P +VK++M+G P RK+DL Y SY +LS+A++++F Q S GG E +T +L GS EY + YED + D MLVGDVPW MF+ + +LR++KSSE L+ EKCR+R Sbjct: 125 AVPVKEKKSSATAPASKAQVVGWPPIRSFRKNSMASSQSQKPGNNSETEEAEAKSGPEQPCL-------YVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTIGQFGSH-GGCGRDGLNESRLTDLLRGS-EYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIGLAPRVMEKCRSR 304
BLAST of FC925508 vs. ExPASy Swiss-Prot
Match: IAA13_ARATH (Auxin-responsive protein IAA13 OS=Arabidopsis thaliana GN=IAA13 PE=2 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 9.069e-29 Identity = 77/190 (40.53%), Postives = 105/190 (55.26%), Query Frame = 3 Query: 18 FPS--SAPAKNTAVPNSSQKRTAPAPVVGWPPIRSFRKNLAGASASKLPASESPNDVPSKTVDEKPAHEPGRKNP-----FVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGLVNKQEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSALS 566 FPS S A ++A S + + VVGWPPI S R N + + A E K D++P + N F+K+NMDGV IGRKVDLNA+ SYE L+ ++++F + G V + +LDGS E+ L YED EGD MLVGDVPW MF+++V RLRV+K+SE + L+ Sbjct: 51 FPSVGSKRAADSASHAGSSPPRSSSQVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFF--------RTNPGTVGLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLA 232 The following BLAST results are available for this feature:
BLAST of FC925508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925508 ID=FC925508; Name=FC925508; organism=Citrus clementina; type=EST; length=611bpback to top |