FC925509

Overview
NameFC925509
Unique NameFC925509
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length640
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925509 vs. ExPASy Swiss-Prot
Match: XTH6_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2)

HSP 1 Score: 272.322 bits (695), Expect = 1.447e-72
Identity = 126/163 (77.30%), Postives = 146/163 (89.57%), Query Frame = 3
Query:  153 RPATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPHG 635
            RPATF+EDFK  WS++H+RQ+E G+AIQLVLDQ++GCGFASKR+YLFGRVSMKIKL+PGDSAGTVTAFYMNS+T  VRDELDFEFLGNR+GQPY+VQTNI+A+GKGDREQRVNLWFDP+ DYH YTILW+H HIVFYVDDVPIR YKN  +    +P +QP G
Sbjct:   31 RPATFVEDFKAAWSESHIRQMEDGKAIQLVLDQSTGCGFASKRKYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTATVRDELDFEFLGNRSGQPYSVQTNIFAHGKGDREQRVNLWFDPSMDYHTYTILWSHKHIVFYVDDVPIREYKNNEAKNIAYPTSQPMG 193          
BLAST of FC925509 vs. ExPASy Swiss-Prot
Match: XTH7_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2)

HSP 1 Score: 264.233 bits (674), Expect = 3.940e-70
Identity = 122/163 (74.85%), Postives = 143/163 (87.73%), Query Frame = 3
Query:  153 RPATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPHG 635
            RPA F +DF++ WSD H+ QI+GGRAIQL LD +SGCGFASK+QYLFGRVSMKIKL+PGDSAGTVTAFYMNS+T++VRDELDFEFLGNR+GQPYTVQTN++A+GKGDREQRVNLWFDP+ D+H Y I WNH  IVFYVD+VPIRVYKN  + + P+P  QP G
Sbjct:   30 RPAKFEDDFRIAWSDTHITQIDGGRAIQLKLDPSSGCGFASKKQYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTDSVRDELDFEFLGNRSGQPYTVQTNVFAHGKGDREQRVNLWFDPSRDFHEYAISWNHLRIVFYVDNVPIRVYKNNEARKVPYPRFQPMG 192          
BLAST of FC925509 vs. ExPASy Swiss-Prot
Match: XTHA_PHAAN (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 9.125e-51
Identity = 96/157 (61.15%), Postives = 115/157 (73.25%), Query Frame = 3
Query:  165 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQP 629
            F  ++  TW+  H++ + GG  IQL LD+ +G GF SK  YLFG  SM IKLVPGDSAGTVTAFY++S T    DE+DFEFLGNRTGQPY +QTN++  GKGDREQR+ LWFDP   YH Y++LWN + IVFYVDD PIRV+KNS      FP NQP
Sbjct:   31 FGRNYVPTWAFDHIKYLNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMYIKLVPGDSAGTVTAFYLSS-TNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTTQYHRYSVLWNMYQIVFYVDDYPIRVFKNSNDLGVKFPFNQP 186          
BLAST of FC925509 vs. ExPASy Swiss-Prot
Match: XTH_TOBAC (Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.033e-50
Identity = 91/157 (57.96%), Postives = 116/157 (73.89%), Query Frame = 3
Query:  165 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQP 629
            F ++++ +W+  H++ + GG  + LVLD++SG GF SK+ YLFG  SMK+KLV GDSAG VTAFY++SN     DE+DFEFLGNRTGQPY +QTN++  GKGDREQR+ LWFDP   YH Y++LWN   IV +VDDVPIR +KNS      FP NQP
Sbjct:   32 FWKNYEPSWASHHIKYLSGGSTVDLVLDRSSGAGFQSKKSYLFGHFSMKLKLVGGDSAGVVTAFYLSSNNAE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKGYHSYSVLWNTFQIVIFVDDVPIRAFKNSKDLGVKFPFNQP 187          
BLAST of FC925509 vs. ExPASy Swiss-Prot
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 7.725e-50
Identity = 92/157 (58.60%), Postives = 116/157 (73.89%), Query Frame = 3
Query:  165 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQP 629
            F  ++  TW+  H++ + GG  + LVLD+ +G GF SK  YLFG  SM IK+V GDSAGTVTAFY++S      DE+DFEFLGNRTGQPY +QTN++  G G+REQR+NLWFDP+ DYH Y++LWN + IVF+VDDVPIRV+KNS      FP NQP
Sbjct:   32 FGRNYFPTWAFDHIKYLNGGSEVHLVLDKYTGTGFQSKGSYLFGHFSMHIKMVAGDSAGTVTAFYLSSQNSE-HDEIDFEFLGNRTGQPYILQTNVFTGGAGNREQRINLWFDPSKDYHSYSVLWNMYQIVFFVDDVPIRVFKNSKDVGVKFPFNQP 187          
BLAST of FC925509 vs. ExPASy Swiss-Prot
Match: XTH_SOYBN (Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 6.539e-49
Identity = 93/157 (59.24%), Postives = 115/157 (73.25%), Query Frame = 3
Query:  165 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQP 629
            F  ++  TW+  H++   GG  IQL LD+ +G GF SK  YLFG  SM IK+VPGDSAGTVTAFY++S      DE+DFEFLGNRTGQPY +QTN++  GKGDREQR+ LWFDP  +YH Y+ILWN + IVF+VD+VPIRV+KNS      FP +QP
Sbjct:   33 FGRNYVPTWAFDHIKYFNGGSDIQLHLDKYTGTGFQSKGSYLFGHFSMYIKMVPGDSAGTVTAFYLSSQNAE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEYHRYSILWNLYQIVFFVDEVPIRVFKNSKDLGVKFPFDQP 188          
BLAST of FC925509 vs. ExPASy Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.457e-48
Identity = 89/157 (56.69%), Postives = 115/157 (73.25%), Query Frame = 3
Query:  165 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQP 629
            F +++  TW+  H+  + GGR +QL LD+ +G GF ++  YLFG  SM IKLV GDSAGTVTAFY++S      DE+DFEFLGNRTGQPY +QTN+++ GKGDREQR+ LWFDP  DYH Y++LWN + I F+VDD PIRV+KNS      +P +QP
Sbjct:   32 FDKNYVPTWAQDHIHYVNGGREVQLSLDKTTGTGFQTRGSYLFGHFSMHIKLVGGDSAGTVTAFYLSSQNSE-HDEIDFEFLGNRTGQPYILQTNVFSGGKGDREQRIYLWFDPTKDYHSYSVLWNLYMIAFFVDDTPIRVFKNSKDLGVRYPFDQP 187          
BLAST of FC925509 vs. ExPASy Swiss-Prot
Match: XTH1_SOLLC (Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum GN=XTH1 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.457e-48
Identity = 88/157 (56.05%), Postives = 116/157 (73.89%), Query Frame = 3
Query:  165 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQP 629
            F ++++ +W+  H++ + GG    L+LD++SG GF SK+ YLFG  SMK++LV GDSAG VTAFY++SN     DE+DFEFLGNRTGQPY +QTN++  GKG+REQR+ LWFDP   YH Y++LWN + IV +VDDVPIR +KNS      FP NQP
Sbjct:   33 FWKNYEPSWASHHIKFLNGGTTTDLILDRSSGAGFQSKKSYLFGHFSMKMRLVGGDSAGVVTAFYLSSNNAE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGNREQRIYLWFDPTKGYHSYSVLWNTYLIVIFVDDVPIRAFKNSKDLGVKFPFNQP 188          
BLAST of FC925509 vs. ExPASy Swiss-Prot
Match: XTH8_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana GN=XTH8 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.245e-48
Identity = 91/162 (56.17%), Postives = 113/162 (69.75%), Query Frame = 3
Query:  162 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTEN--VRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAP----FPMNQP 629
            +F ++F + WS+ H    + G    L LD ++GCGF +K  Y FG  SMK+KLV GDSAG VTA+YM S       RDE+DFEFLGNRTGQPY +QTN+Y NG G+RE R +LWFDP  DYH Y+ILWN+H +VF+VD VPIRVYKNS + P    FP  +P
Sbjct:   24 SFEDNFNIMWSENHFTTSDDGEIWNLSLDNDTGCGFQTKHMYRFGWFSMKLKLVGGDSAGVVTAYYMCSENGAGPERDEIDFEFLGNRTGQPYIIQTNVYKNGTGNREMRHSLWFDPTKDYHTYSILWNNHQLVFFVDRVPIRVYKNSDKVPNNDFFPNQKP 185          
BLAST of FC925509 vs. ExPASy Swiss-Prot
Match: XTH25_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 1.611e-47
Identity = 82/145 (56.55%), Postives = 110/145 (75.86%), Query Frame = 3
Query:  162 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN 596
            TF  +F +TW D   + +  G  + L LD+ SG GF +K++YLFG++ M++KLVPG+SAGTVTA+Y+ S  +   DE+DFEFLGN TG PYT+ TN+Y  GKGDREQ+ +LWFDP AD+H Y++LWN HHIVF VDD+P+R +KN
Sbjct:   29 TFDTEFDITWGDGRGKVLNNGELLTLSLDRASGSGFQTKKEYLFGKIDMQLKLVPGNSAGTVTAYYLKSKGDTW-DEIDFEFLGNLTGDPYTMHTNVYTQGKGDREQQFHLWFDPTADFHTYSVLWNPHHIVFMVDDIPVREFKN 172          
The following BLAST results are available for this feature:
BLAST of FC925509 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
XTH6_ARATH1.447e-7277.30Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH7_ARATH3.940e-7074.85Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHA_PHAAN9.125e-5161.15Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH_TOBAC2.033e-5057.96Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH5_ARATH7.725e-5058.60Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_SOYBN6.539e-4959.24Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_WHEAT1.457e-4856.69Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH1_SOLLC1.457e-4856.05Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH8_ARATH3.245e-4856.17Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH25_ARATH1.611e-4756.55Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YF20FM1 TF Citrus clementina cDNA clone KN0AAP11YF20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925509 ID=FC925509; Name=FC925509; organism=Citrus clementina; type=EST; length=640bp
TAACCACAACATTTTATTAAAGTTCTCTTTCTAATTAGTAACAGATAATA
TTTTATTGTACGGCTTGTTTTACAGCTATGGCTATCCTAAGAAATGCAAT
AGCATTATTTGTGTTGCTTTACTGTCTTGTATCCTGCTCTTGCGTTTTAG
GGCGACCGGCTACTTTTCTTGAGGATTTTAAAGTCACATGGTCCGATGCC
CATCTCAGGCAAATCGAGGGAGGGAGGGCCATCCAGCTAGTTCTAGACCA
AAATTCAGGATGTGGGTTTGCTTCCAAAAGGCAGTACTTGTTCGGGCGTG
TAAGCATGAAGATCAAGCTCGTTCCTGGAGACTCTGCTGGAACTGTCACT
GCATTTTATATGAATTCCAACACCGAAAATGTGAGAGACGAGCTTGATTT
TGAGTTCCTGGGAAACCGAACGGGTCAGCCTTACACGGTCCAGACCAATA
TCTATGCAAATGGAAAAGGCGATAGAGAACAGAGAGTGAACCTCTGGTTT
GACCCTGCTGCAGATTATCACCTTTACACTATTCTCTGGAACCATCACCA
TATTGTCTTCTATGTGGATGATGTGCCCATCAGGGTTTACAAAAACAGTG
GAAGGGCTCCATTTCCAATGAACCAACCCCATGGGGGTGT
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