FC925511
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925511 vs. ExPASy Swiss-Prot
Match: SNAK1_SOLTU (Snakin-1 OS=Solanum tuberosum GN=SN1 PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 7.443e-34 Identity = 59/88 (67.05%), Postives = 71/88 (80.68%), Query Frame = 1 Query: 7 MNLHFTTVVVCSLILSFSLLEPATAGSPFCDSKCAERCKQAGVQDRCLKYCGICCEDCKCVPSGTYGNKHECPCYRDKVNKKGKPKCP 270 M L T+++ +L+++ SL++ AGS FCDSKC RC +AG+ DRCLKYCGICCE+CKCVPSGTYGNKHECPCYRDK N KGK KCP Sbjct: 1 MKLFLLTLLLVTLVITPSLIQTTMAGSSFCDSKCKLRCSKAGLADRCLKYCGICCEECKCVPSGTYGNKHECPCYRDKKNSKGKSKCP 88
BLAST of FC925511 vs. ExPASy Swiss-Prot
Match: GAST1_SOLLC (Protein GAST1 OS=Solanum lycopersicum GN=GAST1 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.011e-14 Identity = 29/59 (49.15%), Postives = 36/59 (61.02%), Query Frame = 1 Query: 94 CDSKCAERCKQAGVQDRCLKYCGICCEDCKCVPSGTYGNKHECPCYRDKVNKKGKPKCP 270 C KC RC + + C+ +C CC C CVP+GTYGNK CPCY + K+G PKCP Sbjct: 54 CQPKCTYRCSKTSYKKPCMFFCQKCCAKCLCVPAGTYGNKQSCPCYNNWKTKRGGPKCP 112
BLAST of FC925511 vs. ExPASy Swiss-Prot
Match: RSI1_SOLLC (Protein RSI-1 OS=Solanum lycopersicum GN=RSI-1 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.489e-13 Identity = 27/59 (45.76%), Postives = 34/59 (57.63%), Query Frame = 1 Query: 94 CDSKCAERCKQAGVQDRCLKYCGICCEDCKCVPSGTYGNKHECPCYRDKVNKKGKPKCP 270 C +C RC + C+ +C CC C CVP G YGNK CPCY + ++GKPKCP Sbjct: 38 CKPRCTYRCSATSHKKPCMFFCQKCCATCLCVPKGVYGNKQSCPCYNNWKTQEGKPKCP 96
BLAST of FC925511 vs. ExPASy Swiss-Prot
Match: GASA4_ARATH (Gibberellin-regulated protein 4 OS=Arabidopsis thaliana GN=GASA4 PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 7.242e-13 Identity = 27/59 (45.76%), Postives = 34/59 (57.63%), Query Frame = 1 Query: 94 CDSKCAERCKQAGVQDRCLKYCGICCEDCKCVPSGTYGNKHECPCYRDKVNKKGKPKCP 270 C S+C RCK+ C+ +C CC C CVP G YGNK C CY + ++G PKCP Sbjct: 48 CPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 106
BLAST of FC925511 vs. ExPASy Swiss-Prot
Match: GASA2_ARATH (Gibberellin-regulated protein 2 OS=Arabidopsis thaliana GN=GASA2 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 6.131e-12 Identity = 26/59 (44.07%), Postives = 32/59 (54.24%), Query Frame = 1 Query: 94 CDSKCAERCKQAGVQDRCLKYCGICCEDCKCVPSGTYGNKHECPCYRDKVNKKGKPKCP 270 C +C +RC ++ CL+ C CC C CVP GT GN H CPCY G+ KCP Sbjct: 41 CGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLKCP 99
BLAST of FC925511 vs. ExPASy Swiss-Prot
Match: GASA3_ARATH (Gibberellin-regulated protein 3 OS=Arabidopsis thaliana GN=GASA3 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 8.008e-12 Identity = 26/59 (44.07%), Postives = 33/59 (55.93%), Query Frame = 1 Query: 94 CDSKCAERCKQAGVQDRCLKYCGICCEDCKCVPSGTYGNKHECPCYRDKVNKKGKPKCP 270 C +C RC ++ + CL+ C CC C CVP GT GN H CPCY + G+ KCP Sbjct: 41 CGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKCP 99
BLAST of FC925511 vs. ExPASy Swiss-Prot
Match: GASA1_ARATH (Gibberellin-regulated protein 1 OS=Arabidopsis thaliana GN=GASA1 PE=1 SV=2) HSP 1 Score: 65.855 bits (159), Expect = 8.853e-11 Identity = 26/59 (44.07%), Postives = 31/59 (52.54%), Query Frame = 1 Query: 94 CDSKCAERCKQAGVQDRCLKYCGICCEDCKCVPSGTYGNKHECPCYRDKVNKKGKPKCP 270 C S C RC+ + C + CG CC C CVP GTYGN +C CY G+ KCP Sbjct: 40 CGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 98 The following BLAST results are available for this feature:
BLAST of FC925511 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925511 ID=FC925511; Name=FC925511; organism=Citrus clementina; type=EST; length=445bpback to top |