FC925514

Overview
NameFC925514
Unique NameFC925514
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length806
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925514 vs. ExPASy Swiss-Prot
Match: GPT2_ARATH (Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=1)

HSP 1 Score: 311.997 bits (798), Expect = 2.489e-84
Identity = 172/236 (72.88%), Postives = 188/236 (79.66%), Query Frame = 1
Query:  112 MISSVKHTPFSASTDFLPKKRFLTPT-LKFSPLPIIQN----SIFNNKFSSEKPLHISSTQNLTFSPKEQQKELKTQCNAYEADRSRPLDINIEVLDEQARFEAAQRLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRVLFGETLPMPVYMSLPPII 804
            M+SS+K +  S ST      R   PT LKFSPL II+N    S   N  S +KPLHISS  N        ++E+K +  AYEADRSRPLDINIE+ DEQ+    AQ+LKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIA+APKTDLEFWK+LFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSR   GET P+PVY+SL PII
Sbjct:    1 MLSSIKPSSSSFSTAISGSVRRSIPTKLKFSPLLIIKNCHNQSFNANVVSHQKPLHISSASNF-------KREVKVE--AYEADRSRPLDINIELPDEQS----AQKLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIADAPKTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFFMGETFPLPVYLSLLPII 223          
BLAST of FC925514 vs. ExPASy Swiss-Prot
Match: GPT1_ARATH (Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.466e-68
Identity = 131/184 (71.20%), Postives = 146/184 (79.35%), Query Frame = 1
Query:  253 KPLHISSTQNLTFSPKEQQKELKTQCNAYEADRSRPLDINIEVLDEQARFEAAQRLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRVLFGETLPMPVYMSLPPII 804
            KPLH+SS+         + K    +C AYEADRS P  I  +    + + EAA++LKIGIYFATWWALNVVFNIYNKKVLNA+PYPWLTSTLSLA GSLMML+SWA  I E PKTD +FWK+LFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSR + GET P  VY+SL PII
Sbjct:   48 KPLHLSSSL--------RAKSPVVRCEAYEADRSEPHPIGDDAAAAETKSEAAKKLKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLAAGSLMMLISWAVGIVETPKTDFDFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFILGETFPTSVYLSLIPII 223          
BLAST of FC925514 vs. ExPASy Swiss-Prot
Match: TPT_PEA (Triose phosphate/phosphate translocator, chloroplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.937e-28
Identity = 58/135 (42.96%), Postives = 84/135 (62.22%), Query Frame = 1
Query:  400 FEAAQRLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRVLFGETLPMPVYMSLPPII 804
            F     L  G +F TW+ LNV+FNI NKK+ N FPYP+  S + LA G +  LVSW   + +    D    K L PVAV H +GHV + VS + VAVSFTH +K+ EP F+   S+ + G+++P+ +++SL P++
Sbjct:   92 FSRYPALTTGFFFFTWYFLNVIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLVSWTVGLPKRAPIDGNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTVKALEPFFNAAASQFILGQSIPITLWLSLAPVV 226          
BLAST of FC925514 vs. ExPASy Swiss-Prot
Match: TPT_SPIOL (Triose phosphate/phosphate translocator, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.139e-27
Identity = 56/129 (43.41%), Postives = 82/129 (63.57%), Query Frame = 1
Query:  418 LKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRVLFGETLPMPVYMSLPPII 804
            L  G +F  W+ LNV+FNI NKK+ N FPYP+  S + L  G +  L SW+  + +    D +  K L PVAV H IGHV + VS + VAVSFTH IK+ EP F+   S+ + G+++P+ +++SL P++
Sbjct:  100 LVTGSFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLASWSVGLPKRAPMDSKLLKLLIPVAVCHAIGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGQSIPITLWLSLAPVV 228          
BLAST of FC925514 vs. ExPASy Swiss-Prot
Match: TPT_FLAPR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.139e-27
Identity = 56/129 (43.41%), Postives = 80/129 (62.02%), Query Frame = 1
Query:  418 LKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRVLFGETLPMPVYMSLPPII 804
            L  G +F  W+ LNV+FNI NKK+ N FPYP+  S + LA G +  L  WA  + +    D    K L PVA  H +GHV + VS + VAVSFTH IKS EP F+   S+ + G+++P+ +++SL P++
Sbjct:  104 LVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSAIHLAVGVVYCLGGWAVGLPKRAPMDSNLLKLLIPVAFCHALGHVTSNVSFAAVAVSFTHTIKSLEPFFNAAASQFILGQSIPITLWLSLAPVV 232          
BLAST of FC925514 vs. ExPASy Swiss-Prot
Match: TPT1_BRAOB (Triose phosphate/phosphate translocator, chloroplastic OS=Brassica oleracea var. botrytis GN=TPT PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.388e-26
Identity = 57/129 (44.19%), Postives = 81/129 (62.79%), Query Frame = 1
Query:  418 LKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRVLFGETLPMPVYMSLPPII 804
            L  GI    W+ LNV+FNI NKK+ N FPYP+  S + L  G +  LVSW+  + +    + +  K L PVAV H IGHV + VS + VAVSFTH IK+ EP F+   S+ L G+ +P+ +++SL P++
Sbjct:  103 LVTGILLLMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWSVGLPKRAPVNSDILKVLIPVAVCHAIGHVTSNVSFAAVAVSFTHTIKALEPFFNASASQFLLGQPIPITLWLSLAPVV 231          
BLAST of FC925514 vs. ExPASy Swiss-Prot
Match: TPT_SOLTU (Triose phosphate/phosphate translocator, chloroplastic OS=Solanum tuberosum GN=TPT PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.039e-26
Identity = 56/140 (40.00%), Postives = 82/140 (58.57%), Query Frame = 1
Query:  385 DEQARFEAAQRLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRVLFGETLPMPVYMSLPPII 804
            D +  F     L  G +F  W+ LNV+FNI NKK+ N FPYP+  S + LA G +  LVSW   + +    D    K L PVA  H +GHV + VS + V VSFTH +K+ EP F+   S+ + G+ +P+ +++SL P++
Sbjct:   99 DAKVGFFNKATLTTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLVSWGVGLPKRAPIDSTQLKLLTPVAFCHALGHVTSNVSFAAVRVSFTHTVKALEPFFNAAASQFILGQQIPLALWLSLAPVV 238          
BLAST of FC925514 vs. ExPASy Swiss-Prot
Match: TPT_FLATR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria trinervia GN=TPT PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.275e-26
Identity = 54/129 (41.86%), Postives = 79/129 (61.24%), Query Frame = 1
Query:  418 LKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRVLFGETLPMPVYMSLPPII 804
            L  G +F  W+ LNV+FNI NKK+ N FPYP+  S + LA G +  L SW   + +    D    K L PV   H +GHV + VS + VAVSFTH IK+ EP F+   S+ + G+++P+ +++SL P++
Sbjct:  103 LVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLGSWTVGLPKRAPVDSNILKLLIPVGFCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGQSIPISLWLSLAPVV 231          
BLAST of FC925514 vs. ExPASy Swiss-Prot
Match: TPT_MAIZE (Triose phosphate/phosphate translocator, chloroplastic OS=Zea mays GN=TPT PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.535e-25
Identity = 53/129 (41.09%), Postives = 80/129 (62.02%), Query Frame = 1
Query:  418 LKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRVLFGETLPMPVYMSLPPII 804
            L  G +F  W+ LNV+FNI NKK+ N FPYP+  S + L  G +  L+SW+  + +    +    K LFPVA+ H IGH+ + VS + VAVSF H IK+ EP FS   ++ + G+ +P  +++SL P++
Sbjct:  106 LVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSLIHLVVGVVYCLISWSVGLPKRAPINGTLLKLLFPVALCHGIGHITSNVSFAAVAVSFAHTIKALEPFFSAAATQFILGQQVPFSLWLSLAPVV 234          
BLAST of FC925514 vs. ExPASy Swiss-Prot
Match: TPT2_BRAOB (Triose phosphate/phosphate translocator, non-green plastid, chloroplastic OS=Brassica oleracea var. botrytis GN=NGTPT PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.621e-22
Identity = 51/129 (39.53%), Postives = 79/129 (61.24%), Query Frame = 1
Query:  418 LKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRVLFGETLPMPVYMSLPPII 804
            L++G+ FA W+  N+ FNIYNK+VL A   P   + +  A GS+++   WA  + + PK       ++ P+AV HT+G++   +S+ KV+VSFTH IK+ EP FSV++S +  GE     V  S+ PI+
Sbjct:  100 LELGLLFAMWYLFNIYFNIYNKQVLKALHAPMTVTLVQFAVGSVLITFMWALNLYKRPKISAAQLAAILPLAVVHTLGNLFTNMSLGKVSVSFTHTIKAMEPFFSVVLSAMFLGEVPTPWVIGSIIPIV 228          
The following BLAST results are available for this feature:
BLAST of FC925514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
GPT2_ARATH2.489e-8472.88Glucose-6-phosphate/phosphate translocator 2, chlo... [more]
GPT1_ARATH1.466e-6871.20Glucose-6-phosphate/phosphate translocator 1, chlo... [more]
TPT_PEA1.937e-2842.96Triose phosphate/phosphate translocator, chloropla... [more]
TPT_SPIOL8.139e-2743.41Triose phosphate/phosphate translocator, chloropla... [more]
TPT_FLAPR8.139e-2743.41Triose phosphate/phosphate translocator, chloropla... [more]
TPT1_BRAOB1.388e-2644.19Triose phosphate/phosphate translocator, chloropla... [more]
TPT_SOLTU4.039e-2640.00Triose phosphate/phosphate translocator, chloropla... [more]
TPT_FLATR5.275e-2641.86Triose phosphate/phosphate translocator, chloropla... [more]
TPT_MAIZE1.535e-2541.09Triose phosphate/phosphate translocator, chloropla... [more]
TPT2_BRAOB4.621e-2239.53Triose phosphate/phosphate translocator, non-green... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YJ14FM1 TF Citrus clementina cDNA clone KN0AAP3YJ14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925514 ID=FC925514; Name=FC925514; organism=Citrus clementina; type=EST; length=806bp
CACAAAGCACATACTTACGTATACAATTTCTCTTCTCTCCGGCTTCGGGT
ACAAAACTTGTCGAATTCGTTGAATTACCCCCCTACCATTCGCATTCTTC
ACAAAAACACAATGATCTCTTCAGTTAAGCACACCCCATTTTCAGCATCC
ACAGATTTCTTGCCAAAGAAACGTTTTTTAACCCCAACGCTAAAGTTCTC
TCCGCTACCCATCATCCAAAATTCAATCTTTAACAACAAATTCTCTTCAG
AAAAGCCTCTTCATATTTCATCAACTCAAAATCTCACATTTTCTCCAAAA
GAGCAACAAAAAGAGCTTAAAACACAGTGCAATGCCTATGAGGCTGACAG
GTCACGTCCTCTGGACATAAACATCGAGGTTCTTGATGAGCAGGCTCGGT
TTGAGGCTGCCCAGAGGCTCAAAATTGGCATATATTTTGCCACATGGTGG
GCTTTGAATGTGGTGTTTAATATCTATAACAAAAAAGTGTTGAATGCTTT
TCCTTATCCTTGGCTTACTTCTACTCTTTCACTGGCTTGTGGCTCTCTCA
TGATGTTGGTTTCTTGGGCCACCAGAATCGCTGAAGCCCCTAAAACCGAT
CTTGAGTTCTGGAAGAGTTTGTTTCCTGTTGCAGTGGCACATACAATTGG
GCATGTAGCAGCAACCGTAAGTATGTCAAAAGTTGCAGTTTCATTCACTC
ACATCATCAAGAGTGGTGAGCCTGCATTCAGTGTATTGGTTTCAAGGGTC
TTGTTCGGTGAGACACTTCCCATGCCGGTTTATATGTCACTCCCGCCGAT
TATTGG
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