FC925528

Overview
NameFC925528
Unique NameFC925528
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925528 vs. ExPASy Swiss-Prot
Match: BI1_ARATH (Bax inhibitor 1 OS=Arabidopsis thaliana GN=BI-1 PE=1 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 2.236e-75
Identity = 137/211 (64.93%), Postives = 165/211 (78.20%), Query Frame = 3
Query:   66 MDAFSSYFESRNGEARW--ESLKNFHQISPVVQSHLKQVYLSLCCALVASATGVYLHLLWNIGGLLTVFAMIGSMVWLLATPSYEEKKRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFACFSVAAMVARRREYXXXXXXXXXXXXXXXXXHFASSIFGGSTAIFKFELYFGLLVFVGYIVVDTQDIIEKTHFGDLDYVK 692
            MDAFSS+F+S+ G   W  +SLKNF QISP VQ+HLK+VYL+LCCALVASA G YLH+LWNIGG+LT    IG+M+WLL+ P YE +KR+SLL  +A+ +GAS+GPLI +AI +DPSILI+AFVGT +AF CFS AAM+ARRREY                  FASSIFGGS +IFKFELYFGLL+FVGY+VVDTQ+IIEK H GD+DYVK
Sbjct:    1 MDAFSSFFDSQPGSRSWSYDSLKNFRQISPAVQNHLKRVYLTLCCALVASAFGAYLHVLWNIGGILTTIGCIGTMIWLLSCPPYEHQKRLSLLFVSAVLEGASVGPLIKVAIDVDPSILITAFVGTAIAFVCFSAAAMLARRREYLYLGGLLSSGLSMLMWLQFASSIFGGSASIFKFELYFGLLIFVGYMVVDTQEIIEKAHLGDMDYVK 211          
BLAST of FC925528 vs. ExPASy Swiss-Prot
Match: BI1_ORYSJ (Bax inhibitor 1 OS=Oryza sativa subsp. japonica GN=BI1 PE=2 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 9.122e-61
Identity = 116/212 (54.72%), Postives = 148/212 (69.81%), Query Frame = 3
Query:   66 MDAFSSYFESRNGEAR---WESLKNFHQISPVVQSHLKQVYLSLCCALVASATGVYLHLLWNIGGLLTVFAMIGSMVWLLATPSYEEKKRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFACFSVAAMVARRREYXXXXXXXXXXXXXXXXXHFASSIFGGSTAIFKFELYFGLLVFVGYIVVDTQDIIEKTHFGDLDYVK 692
            MDAF S   +    A    ++SLKNF QISP VQSHLK VYL+LC AL ASA G YLH+  NIGG+LT+   +GS+ WL + P +EE+KR  +L+A AL +GAS+GPLI LA+  D SIL++AFVGT +AF CF+ AA+VA+RREY                  FA+SIFG ST  F FE+YFGLL+F+GY+V DTQ+IIE+ H GD+DY+K
Sbjct:    1 MDAFYSTSSAYGAAASGWGYDSLKNFRQISPAVQSHLKLVYLTLCVALAASAVGAYLHVALNIGGMLTMLGCVGSIAWLFSVPVFEERKRFGILLAAALLEGASVGPLIKLAVDFDSSILVTAFVGTAIAFGCFTCAAIVAKRREYLYLGGLLSSGLSILLWLQFAASIFGHSTGSFMFEVYFGLLIFLGYMVYDTQEIIERAHHGDMDYIK 212          
BLAST of FC925528 vs. ExPASy Swiss-Prot
Match: BI1_BOVIN (Bax inhibitor 1 OS=Bos taurus GN=TMBIM6 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.859e-35
Identity = 81/203 (39.90%), Postives = 118/203 (58.13%), Query Frame = 3
Query:  114 WESLKNFHQISPVVQSHLKQVYLSLCCALVASATGVYLHLLWNI--GGLLTVFAMIGSMVWLLATP-SYE-EKKRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFACFSVAAMVARRREYXXXXXXXXXXXXXXXXXHFASSIFGGSTAIFKFELYFGLLVFVGYIVVDTQDIIEKTHFGDLDYVKPCPDSF 710
            +++L  F  I+P  Q HLK+VY S    +  +A G Y+H++ +    GLL+    +G M+WL+ATP S+E E+KR+ LL   A   G  +GP +DL I I+PSIL +AF+GT + F CF+++A+ ARRR Y                     ++F GS  +F+  LY GL+V  G+++ DTQ IIEK   GD DY+  C D F
Sbjct:   10 FDALFKFSHITPSTQQHLKKVYASFALCMFVAAAGAYIHVVTHFIQAGLLSALGSLGLMIWLMATPHSHETEQKRLGLLAGFAFLTGVGLGPALDLCIAINPSILPTAFMGTAMIFTCFTLSALYARRRSYLFLGGILMSAMSLMLLSSL-GNLFFGSVWLFQANLYMGLVVMCGFVLFDTQLIIEKAENGDKDYIWHCVDLF 211          
BLAST of FC925528 vs. ExPASy Swiss-Prot
Match: BI1_PIG (Bax inhibitor 1 OS=Sus scrofa GN=TMBIM6 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.598e-35
Identity = 81/203 (39.90%), Postives = 117/203 (57.64%), Query Frame = 3
Query:  114 WESLKNFHQISPVVQSHLKQVYLSLCCALVASATGVYLHLLWNI--GGLLTVFAMIGSMVWLLATP-SYE-EKKRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFACFSVAAMVARRREYXXXXXXXXXXXXXXXXXHFASSIFGGSTAIFKFELYFGLLVFVGYIVVDTQDIIEKTHFGDLDYVKPCPDSF 710
            +++L  F  I+P  Q HLK+VY S    +  +A G Y+H++      GLL+    +G M+WL+ATP S+E E+KR+ LL   A   G  +GP +DL I I+PSIL +AF+GT + F CF+++A+ ARRR Y                     ++F GS  +F+  LY GL+V  G+++ DTQ IIEK   GD DY+  C D F
Sbjct:   10 FDALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHVVTRFIQAGLLSALGSLGLMIWLMATPHSHETEQKRLGLLAGFAFLTGVGLGPALDLCIAINPSILPTAFMGTAMIFTCFTLSALYARRRSYLFLGGILMSAMSLMVLSSL-GNLFFGSIWLFQANLYVGLVVMCGFVLFDTQLIIEKAENGDKDYIWHCVDLF 211          
BLAST of FC925528 vs. ExPASy Swiss-Prot
Match: BI1_MOUSE (Bax inhibitor 1 OS=Mus musculus GN=Tmbim6 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.123e-34
Identity = 80/203 (39.41%), Postives = 117/203 (57.64%), Query Frame = 3
Query:  114 WESLKNFHQISPVVQSHLKQVYLSLCCALVASATGVYLHLLWNI--GGLLTVFAMIGSMVWLLATP-SYE-EKKRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFACFSVAAMVARRREYXXXXXXXXXXXXXXXXXHFASSIFGGSTAIFKFELYFGLLVFVGYIVVDTQDIIEKTHFGDLDYVKPCPDSF 710
            +++L  F  I+P  Q HLK+VY S    +  +A G Y+H++ +    GLL+    +  M+WL+ATP S+E E+KR+ LL   A   G  +GP ++L I ++PSIL +AF+GT + F CFS++A+ ARRR Y                     ++F GS  +F+  LY GLLV  G+++ DTQ IIEK   GD DY+  C D F
Sbjct:   10 FDALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHVVTHFIQAGLLSALGSLALMIWLMATPHSHETEQKRLGLLAGFAFLTGVGLGPALELCIAVNPSILPTAFMGTAMIFTCFSLSALYARRRSYLFLGGILMSAMSLMLLSSL-GNLFFGSIWLFQANLYLGLLVMCGFVLFDTQLIIEKAEHGDKDYIWHCVDLF 211          
BLAST of FC925528 vs. ExPASy Swiss-Prot
Match: BI1_PAROL (Probable Bax inhibitor 1 OS=Paralichthys olivaceus GN=tmbim6 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.766e-33
Identity = 79/203 (38.92%), Postives = 113/203 (55.67%), Query Frame = 3
Query:  114 WESLKNFHQISPVVQSHLKQVYLSLCCALVASATGVYLHLLWNI--GGLLTVFAMIGSMVWLLATP--SYEEKKRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFACFSVAAMVARRREYXXXXXXXXXXXXXXXXXHFASSIFGGSTAIFKFELYFGLLVFVGYIVVDTQDIIEKTHFGDLDYVKPCPDSF 710
            ++SL  F QIS   Q HLK VY SL   +  +A G Y+H++  +  GG+L+V   +G M WL  TP  S  EKKR+++L   A   G  + P +D  I I+PSI+++AF+GT + F CF+++A+ A+RR Y                    +  F GS  +FK  +Y GLL+  G+++ DTQ IIEK   GD DYV    D F
Sbjct:   10 FDSLFKFSQISHSTQVHLKNVYSSLAVCMFVAAAGSYVHVVTRLFQGGMLSVLGSLGMMFWLAMTPHNSETEKKRLAILAGFAFLTGVGLCPTLDFVIAINPSIIVTAFLGTSVIFVCFTLSALYAKRRSYLFLGGTLMSGLSILFLMSMMNMFF-GSVMLFKAHMYLGLLIMCGFVLXDTQLIIEKAENGDKDYVWHSVDLF 211          
BLAST of FC925528 vs. ExPASy Swiss-Prot
Match: BI1_RAT (Bax inhibitor 1 OS=Rattus norvegicus GN=Tmbim6 PE=2 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 4.718e-33
Identity = 80/203 (39.41%), Postives = 115/203 (56.65%), Query Frame = 3
Query:  114 WESLKNFHQISPVVQSHLKQVYLSLCCALVASATGVYLHLLWNI--GGLLTVFAMIGSMVWLLATP-SYE-EKKRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFACFSVAAMVARRREYXXXXXXXXXXXXXXXXXHFASSIFGGSTAIFKFELYFGLLVFVGYIVVDTQDIIEKTHFGDLDYVKPCPDSF 710
            +++L  F  I+P  Q HLK+VY S    +  +A G Y+H++      GLL+    +  M+ L+ATP S+E E+KR+ LL   A   G  +GP ++L I I+PSIL +AF+GT + F CFS++A+ ARRR Y                     ++F GS  +F+  LY GLLV  G+++ DTQ IIEK   GD DY+  C D F
Sbjct:   10 FDALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHVVTRFIQAGLLSALGALALMICLMATPHSHETEQKRLGLLAGFAFLTGVGLGPALELCIAINPSILPTAFMGTAMIFTCFSLSALYARRRSYLFLGGILMSAMSLMFVSSL-GNLFFGSIWLFQANLYMGLLVMCGFVLFDTQLIIEKAEHGDKDYIWHCIDLF 211          
BLAST of FC925528 vs. ExPASy Swiss-Prot
Match: BI1_HUMAN (Bax inhibitor 1 OS=Homo sapiens GN=TMBIM6 PE=1 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 4.718e-33
Identity = 77/203 (37.93%), Postives = 116/203 (57.14%), Query Frame = 3
Query:  114 WESLKNFHQISPVVQSHLKQVYLSLCCALVASATGVYLHLLWNI--GGLLTVFAMIGSMVWLLATP-SYE-EKKRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFACFSVAAMVARRREYXXXXXXXXXXXXXXXXXHFASSIFGGSTAIFKFELYFGLLVFVGYIVVDTQDIIEKTHFGDLDYVKPCPDSF 710
            +++L  F  I+P  Q HLK+VY S    +  +A G Y+H++ +    GLL+    +  M+WL+ATP S+E E+KR+ LL   A   G  +GP ++  I ++PSIL +AF+GT + F CF+++A+ ARRR Y                     ++F GS  +F+  LY GL+V  G+++ DTQ IIEK   GD DY+  C D F
Sbjct:   10 FDALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHMVTHFIQAGLLSALGSLILMIWLMATPHSHETEQKRLGLLAGFAFLTGVGLGPALEFCIAVNPSILPTAFMGTAMIFTCFTLSALYARRRSYLFLGGILMSALSLLLLSSL-GNVFFGSIWLFQANLYVGLVVMCGFVLFDTQLIIEKAEHGDQDYIWHCIDLF 211          
BLAST of FC925528 vs. ExPASy Swiss-Prot
Match: BI1_PONAB (Bax inhibitor 1 OS=Pongo abelii GN=TMBIM6 PE=2 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 6.161e-33
Identity = 77/203 (37.93%), Postives = 116/203 (57.14%), Query Frame = 3
Query:  114 WESLKNFHQISPVVQSHLKQVYLSLCCALVASATGVYLHLLWNI--GGLLTVFAMIGSMVWLLATP-SYE-EKKRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFACFSVAAMVARRREYXXXXXXXXXXXXXXXXXHFASSIFGGSTAIFKFELYFGLLVFVGYIVVDTQDIIEKTHFGDLDYVKPCPDSF 710
            +++L  F  I+P  Q HLK+VY S    +  +A G Y+H++ +    GLL+    +  M+WL+ATP S+E E+KR+ LL   A   G  +GP ++  I ++PSIL +AF+GT + F CF+++A+ ARRR Y                     ++F GS  +F+  LY GL+V  G+++ DTQ IIEK   GD DY+  C D F
Sbjct:   10 FDALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHVVTHFIQAGLLSALGSLILMIWLMATPHSHETEQKRLGLLAGFAFLTGVGLGPALEFCITVNPSILPTAFMGTAMIFTCFTLSALYARRRSYLFLGGILMSALSLLLLSSL-GNVFFGSIWLFQANLYVGLVVMCGFVLFDTQLIIEKAEHGDQDYIWHCIDLF 211          
BLAST of FC925528 vs. ExPASy Swiss-Prot
Match: BI1_DROME (Probable Bax inhibitor 1 OS=Drosophila melanogaster GN=CG7188 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.686e-14
Identity = 55/193 (28.50%), Postives = 93/193 (48.19%), Query Frame = 3
Query:  147 PVVQSHLKQVYLSLCCALVASATGVYLHLLWNIGGLLTVFAMIGSMVWLLATPSYEEK-----KRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFACFSVAAMVARRREYXXXXXXXXXXXXXXXXXHFASSIFGGSTAIFKFELYFGLLVFVGYIVVDTQDIIEKTHFGDLDYVKPCPDSF 710
            P V+ HL +VY+ L     A+A G  L +   +   L V A + ++V +L    Y++       R+ +L A     G ++GPL+     I+P+I++SA  GT + F   S++A++A + +Y                    + +F  S  +   +LY G+ V   +IV DTQ+I+EK   G+ D V+   D F
Sbjct:   25 PYVREHLSKVYMVLGSTAAATAMGAMLQMRDFLD--LGVLAAVATLVLVLGLHFYKDDGKNYYTRLGMLYAFGFCSGQTLGPLLGYICSINPAIILSALTGTFVTFISLSLSALLAEQGKYLYLGGMLVSVINTMALLSLFNMVF-KSYFVQVTQLYVGVFVMAAFIVYDTQNIVEKCRNGNRDVVQHALDLF 214          
The following BLAST results are available for this feature:
BLAST of FC925528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
BI1_ARATH2.236e-7564.93Bax inhibitor 1 OS=Arabidopsis thaliana GN=BI-1 PE... [more]
BI1_ORYSJ9.122e-6154.72Bax inhibitor 1 OS=Oryza sativa subsp. japonica GN... [more]
BI1_BOVIN3.859e-3539.90Bax inhibitor 1 OS=Bos taurus GN=TMBIM6 PE=2 SV=1[more]
BI1_PIG8.598e-3539.90Bax inhibitor 1 OS=Sus scrofa GN=TMBIM6 PE=2 SV=1[more]
BI1_MOUSE1.123e-3439.41Bax inhibitor 1 OS=Mus musculus GN=Tmbim6 PE=2 SV=... [more]
BI1_PAROL2.766e-3338.92Probable Bax inhibitor 1 OS=Paralichthys olivaceus... [more]
BI1_RAT4.718e-3339.41Bax inhibitor 1 OS=Rattus norvegicus GN=Tmbim6 PE=... [more]
BI1_HUMAN4.718e-3337.93Bax inhibitor 1 OS=Homo sapiens GN=TMBIM6 PE=1 SV=... [more]
BI1_PONAB6.161e-3337.93Bax inhibitor 1 OS=Pongo abelii GN=TMBIM6 PE=2 SV=... [more]
BI1_DROME1.686e-1428.50Probable Bax inhibitor 1 OS=Drosophila melanogaste... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP8YL04FM1 TF Citrus clementina cDNA clone KN0AAP8YL04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925528 ID=FC925528; Name=FC925528; organism=Citrus clementina; type=EST; length=712bp
TCTGAATTTTCTCTTGCAATTTTCTCGAGTTTTCTTTTTCGGACAAGCAA
CGTCAATAATCAAGAATGGATGCTTTCTCTTCCTACTTCGAGTCTCGTAA
CGGCGAAGCCCGCTGGGAGTCCTTGAAAAACTTTCACCAGATCTCTCCCG
TCGTCCAGTCTCACCTTAAGCAGGTTTATCTGTCATTATGCTGTGCACTG
GTGGCATCAGCCACTGGAGTCTACCTCCATCTCCTCTGGAACATTGGTGG
CTTACTTACGGTTTTTGCAATGATTGGATCAATGGTTTGGCTTCTCGCAA
CCCCTAGTTATGAAGAGAAAAAGAGGGTTTCTCTGCTCATGGCTACCGCT
CTCTTTAAAGGTGCATCAATTGGTCCTTTGATTGATCTCGCCATTCAAAT
TGACCCAAGCATTCTGATATCTGCATTTGTGGGAACCGGGCTGGCTTTCG
CTTGTTTTTCTGTAGCTGCCATGGTTGCAAGGCGGAGAGAGTATCTCTAT
CTTGGTGGCTTGCTTTCATCAGGCCTGTCCATGCTTCTTTGGTTGCATTT
TGCTTCCTCTATCTTTGGTGGTTCAACAGCTATCTTCAAGTTTGAGTTAT
ACTTTGGGCTGTTGGTGTTTGTTGGCTACATCGTGGTGGATACCCAGGAT
ATAATTGAGAAAACTCACTTTGGAGACTTGGATTATGTCAAGCCATGCCC
TGACTCTTTTCA
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