FC925530

Overview
NameFC925530
Unique NameFC925530
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length786
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925530 vs. ExPASy Swiss-Prot
Match: GDL76_ARATH (GDSL esterase/lipase At5g14450 OS=Arabidopsis thaliana GN=At5g14450 PE=2 SV=1)

HSP 1 Score: 376.326 bits (965), Expect = 1.026e-103
Identity = 183/257 (71.21%), Postives = 208/257 (80.93%), Query Frame = 2
Query:   23 LVAGFLLFTWGGLGVSGVTNKL---PPCEFPAIYNFGDSNSDTGGISAAFEPIRAPHGEGFFHKPAGRDSDGRLIIDFIAESVKLPYLSAYLNSLGTNFRHGANFATGGSTIGKPNETIYEYGISPFFLGMQITQFNQFKARTKELYDEAKIASDTDKLPRQEDFAKALYTFDIGQNDLSVGFRKMSFDQLRAAIPDIVNQLASAVQNIYQQGGRAFWIHNTGPIGCLPTNFFYNHNPPPGFLDEHGCVKDQNNMAV 784
            L+    +F+W  L +  VT  +   P C FPAIYNFGDSNSDTGGISAAFEPIR P+G+GFFH+P GRDSDGRL IDFIAE + LPYLSAYLNSLG+NFRHGANFATGGSTI + NETI++YGISPF L MQI QF+QFKAR+  L+ + K   D +KLPRQE+FAKALYTFDIGQNDLSVGFR MS DQL+A IPDIVN LASAV+NIYQQGGR FW+HNTGP GCLP N FY   P PG+LD+ GCVK QN MA+
Sbjct:   10 LMVSSTVFSWLLLCLFAVTTSVSVQPTCTFPAIYNFGDSNSDTGGISAAFEPIRDPYGQGFFHRPTGRDSDGRLTIDFIAERLGLPYLSAYLNSLGSNFRHGANFATGGSTIRRQNETIFQYGISPFSLDMQIAQFDQFKARSALLFTQIKSRYDREKLPRQEEFAKALYTFDIGQNDLSVGFRTMSVDQLKATIPDIVNHLASAVRNIYQQGGRTFWVHNTGPFGCLPVNMFYMGTPAPGYLDKSGCVKAQNEMAM 266          
BLAST of FC925530 vs. ExPASy Swiss-Prot
Match: GDL53_ARATH (GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana GN=At3g26430 PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.710e-66
Identity = 122/233 (52.36%), Postives = 168/233 (72.10%), Query Frame = 2
Query:   89 PPCEFPAIYNFGDSNSDTGGISAAFEPIRAPHGEGFFHKPAGRDSDGRLIIDFIAESVKLPYLSAYLNSLGTNFRHGANFATGGSTIGKPNETIYEYGISPFFLGMQITQFNQFKARTKELYDEAKIASDTDKLPRQEDFAKALYTFDIGQNDLSVGFR-KMSFDQLRAAIPDIVNQLASAVQNIYQQGGRAFWIHNTGPIGCLPTNFFYNHNP-PPGFLDEHGCVKDQNNMA 781
            P C FPAI+NFGDSNSDTGG+SA+F     P+G+ FFH P+GR SDGRLIIDFIAE + LPYL+A+L+S+G+NF HGANFAT GST+  PN TI + G+SP  L +Q+ QF+ F  R++ + +   +      LP++E F++ALYTFDIGQNDL+ G +  M+ DQ++A IPD+ +QL++ ++ +Y +GGR FWIHNT P+GCLP  +  +  P P   +D HGC   +N +A
Sbjct:   25 PSCNFPAIFNFGDSNSDTGGLSASFGQAPYPNGQTFFHSPSGRFSDGRLIIDFIAEELGLPYLNAFLDSIGSNFSHGANFATAGSTVRPPNATIAQSGVSPISLDVQLVQFSDFITRSQLIRNRGGVFKKL--LPKKEYFSQALYTFDIGQNDLTAGLKLNMTSDQIKAYIPDVHDQLSNVIRKVYSKGGRRFWIHNTAPLGCLP--YVLDRFPVPASQIDNHGCAIPRNEIA 253          
BLAST of FC925530 vs. ExPASy Swiss-Prot
Match: FUCO3_ARATH (Alpha-L-fucosidase 3 OS=Arabidopsis thaliana GN=FXG1 PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 6.083e-64
Identity = 124/230 (53.91%), Postives = 154/230 (66.96%), Query Frame = 2
Query:   95 CEFPAIYNFGDSNSDTGGISAAFEPIRAPHGEGFFHKPAGRDSDGRLIIDFIAESVKLPYLSAYLNSLGTNFRHGANFATGGSTIGKPNETIYEYGISPFFLGMQITQFNQFKARTKELYDEAKIASDTDKLPRQEDFAKALYTFDIGQNDLSVG-FRKMSFDQLRAAIPDIVNQLASAVQNIYQQGGRAFWIHNTGPIGCLPTNFFYNHNPPPGFLDEHGCVKDQNNMA 781
            C FPAI+NFGDSNSDTGG+SAAF     PHG  FF  PAGR  DGRL+IDFIAES+ LPYLSA+L+S+G+NF HGANFAT GS I   N T+ + G SPF L +Q  QF  F  R++ +     +      LP  + F+KALYTFDIGQNDL+ G F   + +Q+   +P+I++Q  +A++NIY QGGR FWIHNTGPIGCL        N    F D HGCV   N++A
Sbjct:   26 CHFPAIFNFGDSNSDTGGLSAAFGQAGPPHGSSFFGSPAGRYCDGRLVIDFIAESLGLPYLSAFLDSVGSNFSHGANFATAGSPIRALNSTLRQSGFSPFSLDVQFVQFYNFHNRSQTVRSRGGVYK--TMLPESDSFSKALYTFDIGQNDLTAGYFANKTVEQVETEVPEIISQFMNAIKNIYGQGGRYFWIHNTGPIGCLAYVIERFPNKASDF-DSHGCVSPLNHLA 252          
BLAST of FC925530 vs. ExPASy Swiss-Prot
Match: EST_HEVBR (Esterase OS=Hevea brasiliensis PE=1 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 1.770e-63
Identity = 124/230 (53.91%), Postives = 158/230 (68.70%), Query Frame = 2
Query:   95 CEFPAIYNFGDSNSDTGGISAAFEPIRAPHGEGFFHKPAGRDSDGRLIIDFIAESVKLPYLSAYLNSLGTNFRHGANFATGGSTIGKPNETIYEY-GISPFFLGMQITQFNQFKARTKELYDEAKIASDTDKLPRQEDFAKALYTFDIGQNDLSVGFRKMSFDQLRAAIPDIVNQLASAVQNIYQQGGRAFWIHNTGPIGCLPTNFFYNHNPPPGFLDEHGCVKDQNNMA 781
            C+FPAI+NFGDSNSDTGG +AAF P+  P+GE FFH+  GR SDGRLIIDFIAES  LPYLS YL+SLG+NF+HGA+FAT GSTI  P   I  + G SPF+L +Q +QF QF  R++ + +   I ++   +P +  F KALYTFDIGQNDL+ GF  ++ +++ A +PD+VN  ++ V+ IY  G R FWIHNTGPIGCL     Y    P    D  GC K  N +A
Sbjct:   30 CDFPAIFNFGDSNSDTGGKAAAFYPLNPPYGETFFHRSTGRYSDGRLIIDFIAESFNLPYLSPYLSSLGSNFKHGADFATAGSTIKLPTTIIPAHGGFSPFYLDVQYSQFRQFIPRSQFIRETGGIFAEL--VPEEYYFEKALYTFDIGQNDLTEGFLNLTVEEVNATVPDLVNSFSANVKKIYDLGARTFWIHNTGPIGCLSFILTYF---PWAEKDSAGCAKAYNEVA 254          
BLAST of FC925530 vs. ExPASy Swiss-Prot
Match: GDL54_ARATH (GDSL esterase/lipase At3g27950 OS=Arabidopsis thaliana GN=At3g27950 PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 7.695e-59
Identity = 122/242 (50.41%), Postives = 159/242 (65.70%), Query Frame = 2
Query:   71 GVTNKLPP----CEFPAIYNFGDSNSDTGGISAAFEPIRAPHGEGFFHKPAGRDSDGRLIIDFIAESVKLPYLSAYLNSLGTNFRHGANFATGGSTIGKPNETIYEYGISPFFLGMQITQFNQFKARTKELYDEAKIASDTDKLPRQEDFAKALYTFDIGQNDLSVGFRKMSFDQLRAAIPDIVNQLASAVQNIYQQGGRAFWIHNTGPIGCLPTNFFYNHNPPPGFLDEHGCVKDQNNMAV 784
            G T KL      C FPA++NFGDSNSDTG ISAA   +  P+G  FF + AGR SDGRLIIDFI E++ LPYL+ YL+S+G N+RHGANFATGGS I +P    +    SPF LG Q++QF  FK RT  LY++       ++L     F+KALYT DIGQNDL++GF+ M+ +QL+A IP I+     A++ +Y++G R F IHNTGP GCLP   +     P    D +GC+K  NN+A+
Sbjct:   16 GFTEKLSALSSSCNFPAVFNFGDSNSDTGAISAAIGEVPPPNGVAFFGRSAGRHSDGRLIIDFITENLTLPYLTPYLDSVGANYRHGANFATGGSCI-RPTLACF----SPFHLGTQVSQFIHFKTRTLSLYNQTN--GKFNRLSHTNYFSKALYTLDIGQNDLAIGFQNMTEEQLKATIPLIIENFTIALKLLYKEGARFFSIHNTGPTGCLP---YLLKAFPAIPRDPYGCLKPLNNVAI 247          
BLAST of FC925530 vs. ExPASy Swiss-Prot
Match: GDL61_ARATH (GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana GN=At4g01130 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.244e-50
Identity = 102/223 (45.74%), Postives = 140/223 (62.78%), Query Frame = 2
Query:   95 CEFPAIYNFGDSNSDTGGISAAFEPIRAPHGEGFFHKPAGRDSDGRLIIDFIAESVKLPYLSAYLNSLGTNFRHGANFATGGSTIGKPNETIYEYGISPFFLGMQITQFNQFKARTKELYDEAKIASDTDKLPRQEDFAKALYTFDIGQNDLSVGFRKMSFDQLRAAIPDIVNQLASAVQNIYQQGGRAFWIHNTGPIGCLPTNFF-YNHNPPPGFLDEHGCV 760
            C+F AI+NFGDSNSDTGG  AAF     P G  +F KPAGR SDGRLIIDF+A+S+ +P+LS YL S+G++FRHGANFAT  ST+  PN +++  GISPF L +Q+ Q  QFK    E +   +       LP +  F K+LYTF IGQND +     +  ++++  +P ++ Q+A  ++ IY  GGR F + N  P+GC P     Y H      LD++GC+
Sbjct:   30 CDFEAIFNFGDSNSDTGGFWAAFPAQSGPWGMTYFKKPAGRASDGRLIIDFLAKSLGMPFLSPYLQSIGSDFRHGANFATLASTVLLPNTSLFVSGISPFSLAIQLNQMKQFKVNVDESHSLDR--PGLKILPSKIVFGKSLYTFYIGQNDFTSNLASIGVERVKLYLPQVIGQIAGTIKEIYGIGGRTFLVLNLAPVGCYPAILTGYTHTDAD--LDKYGCL 248          
BLAST of FC925530 vs. ExPASy Swiss-Prot
Match: GDL22_ARATH (GDSL esterase/lipase At1g54790 OS=Arabidopsis thaliana GN=At1g54790 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.470e-43
Identity = 98/230 (42.61%), Postives = 137/230 (59.57%), Query Frame = 2
Query:  101 FPAIYNFGDSNSDTGGISAAFE-PIRAPHGEGFFHKPAGRDSDGRLIIDFIAESVKLPYLSAYLNSLGT-NFRHGANFATGGSTIGKPNETIYEYGISPFFLGMQITQFNQFKARTKELYDEAKIASDTDK-LPRQEDFAKALYTFDIGQNDLSVGFRKMSFDQLRAAIPDIVNQLASAVQNIYQQGGRAFWIHNTGPIGCLPTNFFYNHNPPPGFLDEHGCVKDQNNMA 781
            +P+ +NFGDSNSDTG + A     +  P+G+  F   + R  DGRL+IDF+ + + LP+L+ YL+SLG  NF+ G NFA  GSTI   N T     +SPF   +QI+QF +FK+R  EL   +K     +K LP  + ++K LY  DIGQND++  F   + DQ+ A+IP I+    + ++ +Y++GGR  WIHNTGP+GCL  N           LDE GCV   N  A
Sbjct:   29 YPSAFNFGDSNSDTGDLVAGLGIRLDLPNGQNSFKTSSQRFCDGRLVIDFLMDEMDLPFLNPYLDSLGLPNFKKGCNFAAAGSTILPANPT----SVSPFSFDLQISQFIRFKSRAIELL--SKTGRKYEKYLPPIDYYSKGLYMIDIGQNDIAGAFYSKTLDQVLASIPSILETFEAGLKRLYEEGGRNIWIHNTGPLGCLAQN-IAKFGTDSTKLDEFGCVSSHNQAA 251          
BLAST of FC925530 vs. ExPASy Swiss-Prot
Match: LIP4_ARATH (GDSL esterase/lipase LIP-4 OS=Arabidopsis thaliana GN=LIP4 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.532e-43
Identity = 102/233 (43.78%), Postives = 136/233 (58.37%), Query Frame = 2
Query:  104 PAIYNFGDSNSDTGGISAAFE-PIRAPHGEGFFHKPAGRDSDGRLIIDFIAESVKLPYLSAYLNSLG-TNFRHGANFATGGSTIGKPNETIYEYGISPFFLGMQITQFNQFKARTKELYDEAKIASDTDKLP----RQEDFAKALYTFDIGQNDLSVGF-RKMSFDQLRAAIPDIVNQLASAVQNIYQQGGRAFWIHNTGPIGCLPTNFFYNHNPPPGFLDEHGCVKDQNNMA 781
            P I+NFGDSNSDTGG+ A    PI  P+G  FF +  GR SDGRL+IDF+ +S+    L  YL+SLG T F++GANFA  GS     N         PF L +Q+ QF+ FK+R+ EL      AS ++ L         F  ALY  DIGQND++  F R  S+ Q    IP I+ ++ S+++ +Y +GGR FWIHNTGP+GCLP       +     LD+HGC+   N+ A
Sbjct:   39 PVIFNFGDSNSDTGGLVAGLGYPIGFPNGRLFFRRSTGRLSDGRLLIDFLCQSLNTSLLRPYLDSLGRTRFQNGANFAIAGSPTLPKNV--------PFSLNIQVKQFSHFKSRSLEL------ASSSNSLKGMFISNNGFKNALYMIDIGQNDIARSFARGNSYSQTVKLIPQIITEIKSSIKRLYDEGGRRFWIHNTGPLGCLPQKLSMVKSKD---LDQHGCLVSYNSAA 254          
BLAST of FC925530 vs. ExPASy Swiss-Prot
Match: GDL2_ARATH (GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana GN=At1g09390 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.532e-43
Identity = 102/233 (43.78%), Postives = 143/233 (61.37%), Query Frame = 2
Query:  104 PAIYNFGDSNSDTGGISAAFE-PIRAPHGEGFFHKPAGRDSDGRLIIDFIAESVKLPYLSAYLNSL-GTNFRHGANFATGGSTIGKPNETIYEYGISPFFLGMQITQFNQFKARTKELYDEAKIASDTDKLPR----QEDFAKALYTFDIGQNDLSVGFRK-MSFDQLRAAIPDIVNQLASAVQNIYQQGGRAFWIHNTGPIGCLPTNFFYNHNPPPGFLDEHGCVKDQNNMA 781
            P I+NFGDSNSDTGG+ A     I  P+G  FF +  GR SDGRL+IDF+ +S+    L+ YL+SL G+ F++GANFA  GS+      T+  Y   PF L +Q+ QF  FK+R  EL      AS +D L      +  F  ALY  DIGQND++  F K +S+ ++   IP++++++ SA++ +Y +GGR FW+HNTGP+GCLP      H+   GF D+HGC+   N  A
Sbjct:   36 PVIFNFGDSNSDTGGLVAGLGYSIGLPNGRSFFQRSTGRLSDGRLVIDFLCQSLNTSLLNPYLDSLVGSKFQNGANFAIVGSS------TLPRY--VPFALNIQLMQFLHFKSRALEL------ASISDPLKEMMIGESGFRNALYMIDIGQNDIADSFSKGLSYSRVVKLIPNVISEIKSAIKILYDEGGRKFWVHNTGPLGCLPQKLSMVHS--KGF-DKHGCLATYNAAA 251          
BLAST of FC925530 vs. ExPASy Swiss-Prot
Match: GDL60_ARATH (GDSL esterase/lipase At3g62280 OS=Arabidopsis thaliana GN=At3g62280 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.904e-41
Identity = 99/230 (43.04%), Postives = 128/230 (55.65%), Query Frame = 2
Query:  104 PAIYNFGDSNSDTGGISAAFE-PIRAPHGEGFFHKPAGRDSDGRLIIDFIAESVKLPYLSAYLNSLGTNFRHGANFATGGSTIGKPNETIYEYGISPFFLGMQITQFNQFKARTKELYDEAKIASDTDKLPRQEDFAKALYTFDIGQNDLSVGF--RKMSFDQLRAAIPDIVNQLASAVQNIYQQGGRAFWIHNTGPIGCLPTNF-FYNHNPPPGFLDEHGCVKDQNNMA 781
            P + NFGDSNSDTGG+ A    PI  PHG  FFH+  GR  DGRLI+DF  E +K+ YLS YL+SL  NF+ G NFA  G+T            I  F L +QI QF  FK R++EL     I+S    L     F  ALY  DIGQNDL +      +++  +   IP ++ ++  A+Q +Y  GGR FW+HNTGP+GC P     + HN     LD  GC +  N +A
Sbjct:   35 PILINFGDSNSDTGGVLAGVGLPIGLPHGITFFHRGTGRLGDGRLIVDFYCEHLKMTYLSPYLDSLSPNFKRGVNFAVSGAT---------ALPIFSFPLAIQIRQFVHFKNRSQEL-----ISSGRRDLIDDNGFRNALYMIDIGQNDLLLALYDSNLTYAPVVEKIPSMLLEIKKAIQTVYLYGGRKFWVHNTGPLGCAPKELAIHLHNDSD--LDPIGCFRVHNEVA 248          
The following BLAST results are available for this feature:
BLAST of FC925530 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
GDL76_ARATH1.026e-10371.21GDSL esterase/lipase At5g14450 OS=Arabidopsis thal... [more]
GDL53_ARATH1.710e-6652.36GDSL esterase/lipase At3g26430 OS=Arabidopsis thal... [more]
FUCO3_ARATH6.083e-6453.91Alpha-L-fucosidase 3 OS=Arabidopsis thaliana GN=FX... [more]
EST_HEVBR1.770e-6353.91Esterase OS=Hevea brasiliensis PE=1 SV=1[more]
GDL54_ARATH7.695e-5950.41GDSL esterase/lipase At3g27950 OS=Arabidopsis thal... [more]
GDL61_ARATH2.244e-5045.74GDSL esterase/lipase At4g01130 OS=Arabidopsis thal... [more]
GDL22_ARATH3.470e-4342.61GDSL esterase/lipase At1g54790 OS=Arabidopsis thal... [more]
LIP4_ARATH4.532e-4343.78GDSL esterase/lipase LIP-4 OS=Arabidopsis thaliana... [more]
GDL2_ARATH4.532e-4343.78GDSL esterase/lipase At1g09390 OS=Arabidopsis thal... [more]
GDL60_ARATH1.904e-4143.04GDSL esterase/lipase At3g62280 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YL05FM1 TF Citrus clementina cDNA clone KN0AAP8YL05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925530 ID=FC925530; Name=FC925530; organism=Citrus clementina; type=EST; length=786bp
GACAATGTTGTTTTGGAGAGCTTTGGTTGCTGGGTTTTTACTATTCACAT
GGGGCGGCTTGGGCGTGAGTGGTGTTACTAATAAATTGCCACCGTGTGAG
TTCCCTGCAATTTACAATTTTGGGGACTCAAATTCGGATACTGGTGGCAT
TTCAGCTGCATTTGAGCCAATTCGAGCTCCACATGGAGAGGGGTTCTTTC
ACAAGCCAGCTGGTAGAGATTCTGATGGTCGTCTCATCATAGACTTCATT
GCTGAGAGTGTGAAGTTGCCATACTTGAGTGCATATTTGAATTCACTGGG
AACAAATTTTCGGCATGGTGCTAATTTTGCCACTGGAGGATCAACCATTG
GAAAGCCTAATGAGACTATATACGAGTATGGAATTAGTCCTTTCTTTCTG
GGTATGCAGATTACGCAATTTAACCAATTCAAAGCACGAACCAAAGAGCT
GTACGATGAAGCCAAGATTGCCTCGGATACAGACAAGCTGCCGAGACAGG
AGGACTTTGCCAAGGCTCTTTACACGTTTGATATTGGACAAAATGATCTT
TCTGTTGGATTTAGAAAGATGAGTTTTGATCAACTTCGTGCAGCAATACC
CGACATTGTTAATCAGTTAGCTTCAGCTGTTCAAAATATATATCAACAAG
GAGGCAGGGCATTTTGGATACACAATACAGGGCCTATTGGTTGCTTGCCA
ACCAATTTTTTCTACAATCATAACCCACCACCAGGCTTTCTTGATGAGCA
TGGCTGCGTCAAGGATCAAAATAACATGGCTGTGGA
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