FC925536

Overview
NameFC925536
Unique NameFC925536
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length783
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925536 vs. ExPASy Swiss-Prot
Match: CYPR1_CYNCA (Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO1 PE=1 SV=2)

HSP 1 Score: 268.085 bits (684), Expect = 3.907e-71
Identity = 126/190 (66.32%), Postives = 148/190 (77.89%), Query Frame = 2
Query:  212 GVHHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDPEEGGEIVFGGVDPKHFKG 781
            GV     DSD +++ LKN+MDAQYFGEIGIG+PPQ F+VIFDTGSSNLWVPSSKCYFS++C FHS+Y+S  S TY + GKS  I YG+GSISGFFSQ              FIEAT+E  +TFL A+FDGI+GLGF+EI+VGDAVPVW  M+ QGLV E VFSFWLNR+ D +EGGE+VFGGVDP HFKG
Sbjct:   28 GVRGNFRDSDGELIALKNYMDAQYFGEIGIGTPPQKFTVIFDTGSSNLWVPSSKCYFSVACLFHSKYRSTDSTTYKKNGKSAAIQYGTGSISGFFSQDSVKLGDLLVKEQDFIEATKEPGITFLAAKFDGILGLGFQEISVGDAVPVWYTMLNQGLVQEPVFSFWLNRNADEQEGGELVFGGVDPNHFKG 217          
BLAST of FC925536 vs. ExPASy Swiss-Prot
Match: ASPRX_ORYSJ (Aspartic proteinase OS=Oryza sativa subsp. japonica GN=RAP PE=2 SV=2)

HSP 1 Score: 267.314 bits (682), Expect = 6.664e-71
Identity = 128/250 (51.20%), Postives = 172/250 (68.80%), Query Frame = 2
Query:   32 EQKLLRSVFCLWVLASCLLLPASSNXXXXXXXXXXXXXXHSLNAARITRKERYMGGAGVSGVHHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDPEEGGEIVFGGVDPKHFKG 781
            ++ LL    CLW L+  LLL ASS+                L AA++ ++   +          + G SD D +PL ++++ QY+G IG+GSPPQNF+VIFDTGSSNLWVPS+KCYFSI+CY HSRY S+KS++Y   G++C+I YGSG+ISGFFS+              FIEATRE S+TF++ +FDGI+GLG+ EI+VG A P+W +M EQ L++++VFSFWLNRDPD   GGE+VFGG+DPKH+KG
Sbjct:    3 KRHLLLVTTCLWALSCALLLHASSDGFLRVNLNKKRLDKEDLTAAKLAQQGNRL---------LKTGSSDSDPVPLVDYLNTQYYGVIGLGSPPQNFTVIFDTGSSNLWVPSAKCYFSIACYLHSRYNSKKSSSYKADGETCKITYGSGAISGFFSKDNVLVGDLVVKNQKFIEATRETSVTFIIGKFDGILGLGYPEISVGKAPPIWQSMQEQELLADDVFSFWLNRDPDASSGGELVFGGMDPKHYKG 243          
BLAST of FC925536 vs. ExPASy Swiss-Prot
Match: ASPR1_ORYSJ (Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica GN=Os05g0567100 PE=2 SV=2)

HSP 1 Score: 263.077 bits (671), Expect = 1.257e-69
Identity = 129/209 (61.72%), Postives = 160/209 (76.56%), Query Frame = 2
Query:  161 AARITRKE--RYMGGAGVSGVHHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDPEEGGEIVFGGVDPKHFKG 781
            AAR++ +E  R +G  G + +    G  + DI+ LKN+M+AQYFGEIG+G+PPQ F+VIFDTGSSNLWVPS+KCYFSI+C+FHSRYKS +S+TY + GK   I YG+GSI+GFFS+              FIEAT+E  LTF++A+FDGI+GLGF+EI+VGDAVPVW  MVEQGLVSE VFSFW NR  D  EGGEIVFGG+DP H+KG
Sbjct:   45 AARLSGEEGARRLGLRGANSLGG--GGGEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACFFHSRYKSGQSSTYQKNGKPAAIQYGTGSIAGFFSEDSVTVGDLVVKDQEFIEATKEPGLTFMVAKFDGILGLGFQEISVGDAVPVWYKMVEQGLVSEPVFSFWFNRHSDEGEGGEIVFGGMDPSHYKG 251          
BLAST of FC925536 vs. ExPASy Swiss-Prot
Match: ASPR_HORVU (Phytepsin OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 3.422e-67
Identity = 118/192 (61.46%), Postives = 149/192 (77.60%), Query Frame = 2
Query:  206 VSGVHHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDPEEGGEIVFGGVDPKHFKG 781
            +SG +    + + DI+ LKN+M+AQYFGEIG+G+PPQ F+VIFDTGSSNLWVPS+KCYFSI+CY HSRYK+  S+TY + GK   I YG+GSI+G+FS+              FIEAT+E  +TFL+A+FDGI+GLGF+EI+VG AVPVW  M+EQGLVS+ VFSFWLNR  D  EGGEI+FGG+DPKH+ G
Sbjct:   59 LSGANPLRSEEEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYLHSRYKAGASSTYKKNGKPAAIQYGTGSIAGYFSEDSVTVGDLVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVG 250          
BLAST of FC925536 vs. ExPASy Swiss-Prot
Match: ASPR_CUCPE (Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.101e-65
Identity = 131/245 (53.47%), Postives = 172/245 (70.20%), Query Frame = 2
Query:   59 CLWVLASCLLLPASSNXXXXXXXXXXXXXX-HSLNAARITRKERYMGGAGVSGVHHR--LGDS-DEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDPEEGGEIVFGGVDPKHFKG 781
            CL++L S  ++ ++SN                +  AAR+  K+  +  A     + +  LG+S D DI+ LKN++DAQY+GEI IG+PPQ F+VIFDTGSSNLWV   +C FS++C+FH+RYKS +S++Y + G S  I YG+G++SGFFS               FIEATRE SLTFL+A+FDG++GLGF+EIAVG+AVPVW NMVEQGLV E VFSFWLNR+ + EEGGEIVFGGVDPKH++G
Sbjct:   12 CLFLLVSFNIVSSASNDGLLRVGLKKIKLDPENRLAARVESKDAEILKAAFRKYNPKGNLGESSDTDIVALKNYLDAQYYGEIAIGTPPQKFTVIFDTGSSNLWV-LCECLFSVACHFHARYKSSRSSSYKKNGTSASIRYGTGAVSGFFSYDNVKVGDLVVKEQVFIEATREPSLTFLVAKFDGLLGLGFQEIAVGNAVPVWYNMVEQGLVKEPVFSFWLNRNVEEEEGGEIVFGGVDPKHYRG 255          
BLAST of FC925536 vs. ExPASy Swiss-Prot
Match: CATD_CHICK (Cathepsin D OS=Gallus gallus GN=CTSD PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 9.363e-49
Identity = 88/176 (50.00%), Postives = 122/176 (69.32%), Query Frame = 2
Query:  257 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYF-SISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDPEEGGEIVFGGVDPKHFKG 781
            LKN+MDAQY+GEIGIG+PPQ F+V+FDTGSSNLWVPS  C+   I+C  H +Y + KS+TY E G    I+YG+GS+SGF SQ              F EA ++  +TF+ A+FDGI+G+ F  I+V    P +DN+++Q L+ + +FSF+LNRDP  + GGE++ GG DPK++ G
Sbjct:   70 LKNYMDAQYYGEIGIGTPPQKFTVVFDTGSSNLWVPSVHCHLLDIACLLHHKYDASKSSTYVENGTEFAIHYGTGSLSGFLSQDTVTLGNLKIKNQIFGEAVKQPGITFIAAKFDGILGMAFPRISVDKVTPFFDNVMQQKLIEKNIFSFYLNRDPTAQPGGELLLGGTDPKYYSG 245          
BLAST of FC925536 vs. ExPASy Swiss-Prot
Match: CATD_HUMAN (Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.647e-48
Identity = 91/187 (48.66%), Postives = 129/187 (68.98%), Query Frame = 2
Query:  257 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXX-----------FIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDPEEGGEIVFGGVDPKHFKG 781
            LKN+MDAQY+GEIGIG+PPQ F+V+FDTGSSNLWVPS  C    I+C+ H +Y S KS+TY + G S +I+YGSGS+SG+ SQ                         F EAT++  +TF+ A+FDGI+G+ +  I+V + +PV+DN+++Q LV + +FSF+L+RDPD + GGE++ GG D K++KG
Sbjct:   71 LKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCQSASSASALGGVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTDSKYYKG 257          
BLAST of FC925536 vs. ExPASy Swiss-Prot
Match: CATD_CANFA (Cathepsin D OS=Canis familiaris GN=CTSD PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 7.927e-48
Identity = 90/185 (48.65%), Postives = 129/185 (69.73%), Query Frame = 2
Query:  257 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXX---------FIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDPEEGGEIVFGGVDPKHFKG 781
            L+N+MDAQY+GEIGIG+PPQ F+V+FDTGSSNLWVPS  C    I+C+ H +Y S KS+TY + G S +I+YGSGS+SG+ SQ                       F EAT++  +TF+ A+FDGI+G+ +  I+V + +PV+DN+++Q LV + +FSF+LNRDP+ + GGE++ GG D K++KG
Sbjct:   71 LRNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSGKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCKSALSGLAGIKVERQTFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVEKNIFSFYLNRDPNAQPGGELMLGGTDSKYYKG 255          
BLAST of FC925536 vs. ExPASy Swiss-Prot
Match: CATD_PIG (Cathepsin D OS=Sus scrofa GN=CTSD PE=1 SV=2)

HSP 1 Score: 190.274 bits (482), Expect = 1.035e-47
Identity = 91/186 (48.92%), Postives = 128/186 (68.82%), Query Frame = 2
Query:  257 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXX----------FIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDPEEGGEIVFGGVDPKHFKG 781
            LKN+MDAQY+GEIGIG+PPQ F+V+FDTGSSNLWVPS  C    I+C+ H +Y S KS+TY + G +  I+YGSGS+SG+ S                         F EAT++  LTF+ A+FDGI+G+ +  I+V + VPV+DN+++Q LV +++FSF+LNRDP  + GGE++ GG+D K++KG
Sbjct:    7 LKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSGKSSTYVKNGTTFAIHYGSGSLSGYLSSQDTVSVPCNSALSGVGGIKVERQTFGEATKQPGLTFIAAKFDGILGMAYPRISVNNVVPVFDNLMQQKLVDKDIFSFYLNRDPGAQPGGELMLGGIDSKYYKG 192          
BLAST of FC925536 vs. ExPASy Swiss-Prot
Match: ASPP_AEDAE (Lysosomal aspartic protease OS=Aedes aegypti GN=AAEL006169 PE=1 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 1.352e-47
Identity = 90/177 (50.85%), Postives = 119/177 (67.23%), Query Frame = 2
Query:  254 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFS-ISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDPEEGGEIVFGGVDPKHFKG 781
            PL N++DAQY+G I IG+PPQ+F V+FDTGSSNLWVPS +C F+ I+C  H++Y ++KS+T+ + G +  I YGSGS+SG+ S               F EA  E  L F+ A+FDGI+GLG+  I+V   VPV+ NM  QGL+   VFSF+LNRDP   EGGEI+FGG D   + G
Sbjct:   59 PLSNYLDAQYYGAITIGTPPQSFKVVFDTGSSNLWVPSKECSFTNIACLMHNKYNAKKSSTFEKNGTAFHIQYGSGSLSGYLSTDTVGLGGVSVTKQTFAEAINEPGLVFVAAKFDGILGLGYSSISVDGVVPVFYNMFNQGLIDAPVFSFYLNRDPSAAEGGEIIFGGSDSNKYTG 235          
The following BLAST results are available for this feature:
BLAST of FC925536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
CYPR1_CYNCA3.907e-7166.32Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO... [more]
ASPRX_ORYSJ6.664e-7151.20Aspartic proteinase OS=Oryza sativa subsp. japonic... [more]
ASPR1_ORYSJ1.257e-6961.72Aspartic proteinase oryzasin-1 OS=Oryza sativa sub... [more]
ASPR_HORVU3.422e-6761.46Phytepsin OS=Hordeum vulgare PE=1 SV=1[more]
ASPR_CUCPE1.101e-6553.47Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1[more]
CATD_CHICK9.363e-4950.00Cathepsin D OS=Gallus gallus GN=CTSD PE=1 SV=1[more]
CATD_HUMAN4.647e-4848.66Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1[more]
CATD_CANFA7.927e-4848.65Cathepsin D OS=Canis familiaris GN=CTSD PE=2 SV=1[more]
CATD_PIG1.035e-4748.92Cathepsin D OS=Sus scrofa GN=CTSD PE=1 SV=2[more]
ASPP_AEDAE1.352e-4750.85Lysosomal aspartic protease OS=Aedes aegypti GN=AA... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YL08FM1 TF Citrus clementina cDNA clone KN0AAP8YL08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925536 ID=FC925536; Name=FC925536; organism=Citrus clementina; type=EST; length=783bp
CAGCTTCAGCAGAAAACCAAAGAACATCATGGAGCAGAAACTTCTTCGGT
CAGTTTTCTGTTTATGGGTGCTAGCGTCGTGCTTGCTTCTTCCTGCTTCC
TCTAATGGCTTACGGAGAATTGGCTTGAAGAAGCGGCGTCTAGATCTTCA
TAGTCTAAATGCTGCAAGAATAACAAGAAAAGAGCGATATATGGGGGGAG
CAGGTGTTAGTGGCGTGCACCATCGTTTGGGTGATTCAGATGAAGATATT
TTGCCTTTGAAGAACTTTATGGATGCTCAATACTTTGGAGAGATTGGTAT
TGGCTCTCCCCCACAAAATTTCAGTGTCATATTTGATACCGGCAGTTCCA
ATCTCTGGGTTCCATCTTCAAAGTGCTATTTCTCTATTTCCTGCTATTTC
CATTCGAGGTACAAGTCCAGAAAATCCAATACATATACCGAAATTGGAAA
ATCCTGTGAAATAAACTATGGATCTGGATCAATTTCTGGCTTCTTCAGTC
AAGACAATGTTGAAGTTGGGGATGTTGTTGTCAAGGATCAGGTTTTCATT
GAGGCTACACGAGAAGGGAGTCTCACTTTTCTATTGGCAAGGTTTGATGG
AATAATAGGGCTTGGGTTCCGGGAAATTGCAGTTGGGGATGCTGTGCCTG
TGTGGGACAATATGGTTGAGCAGGGCCTTGTAAGCGAGGAGGTCTTCTCA
TTCTGGCTCAACAGGGATCCAGACCCTGAAGAGGGGGGAGAGATTGTTTT
TGGTGGTGTTGATCCAAAGCACTTTAAAGGGAA
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