FC925546
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925546 vs. ExPASy Swiss-Prot
Match: GEM1_USTMA (Mitochondrial Rho GTPase 1 OS=Ustilago maydis GN=GEM1 PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.377e-46 Identity = 91/188 (48.40%), Postives = 126/188 (67.02%), Query Frame = 3 Query: 183 KSSLIAAAATESVPEKVPPVHAPTRLPPDFYPDRVPVTIIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLPELRRLEIKVPIIVAGCKLDLR-GDHNATSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMDG 743 KS+LI + E+ KV V P LPP+ P+ V I+DTSSS E++ L EL+RA+ + + Y+ + S+ R+ +YWLP +R L + VP+I+ G K+DLR GD +LE+ + P+M +F+E+ETCVECSA + V +VFY+AQKAVL+PTAPL+D E LKP C ALKRIF +CD D DG Sbjct: 17 KSTLITSLVKEAYVAKVQKVVPPITLPPEVAPEAVVTKIVDTSSSPEHRANLEAELRRANVICIVYSISAPSSFDRIPTYWLPYIRSLGVNVPVILVGNKIDLRSGDVTNAALEDELAPVMAEFKEVETCVECSARIPLNVSEVFYFAQKAVLYPTAPLYDSREHVLKPACVDALKRIFRLCDSDKDG 204
BLAST of FC925546 vs. ExPASy Swiss-Prot
Match: GEM1_CRYNE (Mitochondrial Rho GTPase 1 OS=Cryptococcus neoformans GN=GEM1 PE=3 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 7.819e-42 Identity = 87/188 (46.28%), Postives = 118/188 (62.77%), Query Frame = 3 Query: 183 KSSLIAAAATESVPEKVPPVHAPTRLPPDFYPDRVPVTIIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLPELRRLEIKVPIIVAGCKLDLRGDHNATS-LEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMDG 743 KSS+I + E+ VP V +PP+ P+ +I+DTSS+ ++ L + RA + L Y+ S+ R++ YWLP RR I VP+I+ G K+DLRG LE+ PIM++F+E+ET VECSA + V +VFY+AQKAVLHPTAPL+D E TLKP+C +ALKRIF I D D DG Sbjct: 19 KSSIITSLIKEAFVTNVPHVVPEVTIPPEITPENFTTSIVDTSSNPRSRPHLLSSISRAHVICLVYSIADPSSFDRVAEYWLPLFRREGINVPVILVGNKIDLRGGRVTNQGLEDESAPIMREFKEVETVVECSALLPLNVSEVFYFAQKAVLHPTAPLYDSREHTLKPKCLEALKRIFTISDVDKDG 206
BLAST of FC925546 vs. ExPASy Swiss-Prot
Match: MIRO2_PIG (Mitochondrial Rho GTPase 2 OS=Sus scrofa GN=RHOT2 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.850e-38 Identity = 83/189 (43.92%), Postives = 121/189 (64.02%), Query Frame = 3 Query: 183 KSSLIAAAATESVPEKVPPVHAPTRLPPDFYPDRVPVTIIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLPELR---RLEIKVPIIVAGCKLDLRGDHNATSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMD 740 K+SLI + E PE+VPP +P D P++VP I+D S + + +L +E+++A V + Y ++++T+ ++ + W+P + R +VPII+ G K DLR S+E V+ PIM QF EIETCVECSA + + ++FYYAQKAVLHPTAPL+D + + L+P C QAL RIF + D DMD Sbjct: 17 KTSLILSLVGEEFPEEVPPRAEEITIPADVTPEKVPTHIVDYSEAEQTAEELQDEIQKASVVCVVYDVSEETTVEKIRTKWIPLVNGGTRRGPRVPIILVGNKSDLRP---GGSMEAVL-PIMSQFPEIETCVECSAKNLKNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRIFRLSDQDMD 201
BLAST of FC925546 vs. ExPASy Swiss-Prot
Match: MIRO2_HUMAN (Mitochondrial Rho GTPase 2 OS=Homo sapiens GN=RHOT2 PE=1 SV=2) HSP 1 Score: 157.532 bits (397), Expect = 6.850e-38 Identity = 82/189 (43.39%), Postives = 122/189 (64.55%), Query Frame = 3 Query: 183 KSSLIAAAATESVPEKVPPVHAPTRLPPDFYPDRVPVTIIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLPELRRLEI---KVPIIVAGCKLDLRGDHNATSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMD 740 K+SLI + E PE+VPP +P D P++VP I+D S + + +L EE+ +A+ V + Y ++++T+ ++ + W+P + +VPII+ G K DLR + +S+E V+ PIM QF EIETCVECSA + + ++FYYAQKAVLHPTAPL+D + + L+P C QAL RIF + D D+D Sbjct: 17 KTSLILSLVGEEFPEEVPPRAEEITIPADVTPEKVPTHIVDYSEAEQTDEELREEIHKANVVCVVYDVSEEATIEKIRTKWIPLVNGGTTQGPRVPIILVGNKSDLR---SGSSMEAVL-PIMSQFPEIETCVECSAKNLRNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRIFRLSDQDLD 201
BLAST of FC925546 vs. ExPASy Swiss-Prot
Match: MIRO2_CHICK (Mitochondrial Rho GTPase 2 OS=Gallus gallus GN=RHOT2 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.526e-37 Identity = 81/187 (43.32%), Postives = 118/187 (63.10%), Query Frame = 3 Query: 183 KSSLIAAAATESVPEKVPPVHAPTRLPPDFYPDRVPVTIIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLPELR---RLEIKVPIIVAGCKLDLRGDHNATSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHD 734 K+SLI A E PE+VPP +P D P++VP I+D S S + + +L EE+ +A+ V + Y +++T+ ++ + W+P + ++PII+ G K DL+ S EV+ PIM QF EIETCVECSA + + ++FYYAQKAVLHPTAPL+D +E+ L+P C +AL RIF + D D Sbjct: 17 KTSLIMALVGEEFPEEVPPRAEEITIPADVTPEKVPTHIVDYSESEQTEDELQEEIAKANVVCVVYDVTKEATIEKIRTKWIPMVNGGAEKGARIPIILVGNKSDLQ----MGSSMEVILPIMNQFSEIETCVECSAKNLKNISELFYYAQKAVLHPTAPLYDPEEKQLRPACSRALTRIFNLSDQD 199
BLAST of FC925546 vs. ExPASy Swiss-Prot
Match: MIRO1_MOUSE (Mitochondrial Rho GTPase 1 OS=Mus musculus GN=Rhot1 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.799e-37 Identity = 79/190 (41.58%), Postives = 123/190 (64.74%), Query Frame = 3 Query: 183 KSSLIAAAATESVPEKVPPVHAPTRLPPDFYPDRVPVTIIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLP---ELRRLEIKVPIIVAGCKLDLRGDHNATSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMDG 743 K+SLI + +E PE+VPP +P D P+RVP I+D S + ++ +L++E+ +A+ + + YA N + ++ +++S W+P E + ++P+I+ G K DL +S+E ++ PIM Q+ EIETCVECSA + + ++FYYAQKAVLHPT PL+ +E+ +KP C +AL RIF I D D DG Sbjct: 30 KTSLIMSLVSEEFPEEVPPRAEEITIPADVTPERVPTHIVDYSEAEQSDEQLHQEISQANVICIVYAVNNKHSIDKVTSRWIPLINERTDKDSRLPLILVGNKSDLV---EYSSMETIL-PIMNQYTEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKEMKPACIKALTRIFKISDQDNDG 215
BLAST of FC925546 vs. ExPASy Swiss-Prot
Match: MIRO1_HUMAN (Mitochondrial Rho GTPase 1 OS=Homo sapiens GN=RHOT1 PE=1 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 5.799e-37 Identity = 79/190 (41.58%), Postives = 123/190 (64.74%), Query Frame = 3 Query: 183 KSSLIAAAATESVPEKVPPVHAPTRLPPDFYPDRVPVTIIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLP---ELRRLEIKVPIIVAGCKLDLRGDHNATSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMDG 743 K+SLI + +E PE+VPP +P D P+RVP I+D S + ++ +L++E+ +A+ + + YA N + ++ +++S W+P E + ++P+I+ G K DL +S+E ++ PIM Q+ EIETCVECSA + + ++FYYAQKAVLHPT PL+ +E+ +KP C +AL RIF I D D DG Sbjct: 17 KTSLIMSLVSEEFPEEVPPRAEEITIPADVTPERVPTHIVDYSEAEQSDEQLHQEISQANVICIVYAVNNKHSIDKVTSRWIPLINERTDKDSRLPLILVGNKSDLV---EYSSMETIL-PIMNQYTEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKEMKPACIKALTRIFKISDQDNDG 202
BLAST of FC925546 vs. ExPASy Swiss-Prot
Match: MIRO1_DANRE (Mitochondrial Rho GTPase 1-A OS=Danio rerio GN=rhot1a PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.799e-37 Identity = 79/190 (41.58%), Postives = 125/190 (65.79%), Query Frame = 3 Query: 183 KSSLIAAAATESVPEKVPPVHAPTRLPPDFYPDRVPVTIIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLP---ELRRLEIKVPIIVAGCKLDLRGDHNATSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMDG 743 K+SLI + +E P++VPP +P D P+RVP I+D S + ++ +L +E+ +A+ + + Y+ N + ++ +++S+W+P E + +VP+I+ G K DL +H+ S+E ++ PIM Q+ EIETCVECSA + + ++FYYAQKAVLHPT PL+ +E+ +KP C +AL RIF I D D DG Sbjct: 17 KTSLIMSLVSEEFPDEVPPRAEEITIPADVTPERVPTHIVDYSEAEQSDEQLYQEITKANVICIVYSVNNKKSIEKVTSHWIPLINERTDKDSRVPLILVGNKSDLV-EHS--SMETIL-PIMNQYSEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYSPEEKEMKPSCIKALTRIFKISDLDNDG 202
BLAST of FC925546 vs. ExPASy Swiss-Prot
Match: MIRO1_BOVIN (Mitochondrial Rho GTPase 1 OS=Bos taurus GN=RHOT1 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.799e-37 Identity = 79/190 (41.58%), Postives = 123/190 (64.74%), Query Frame = 3 Query: 183 KSSLIAAAATESVPEKVPPVHAPTRLPPDFYPDRVPVTIIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLP---ELRRLEIKVPIIVAGCKLDLRGDHNATSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMDG 743 K+SLI + +E PE+VPP +P D P+RVP I+D S + ++ +L++E+ +A+ + + YA N + ++ +++S W+P E + ++P+I+ G K DL +S+E ++ PIM Q+ EIETCVECSA + + ++FYYAQKAVLHPT PL+ +E+ +KP C +AL RIF I D D DG Sbjct: 30 KTSLIMSLVSEEFPEEVPPRAEEITIPADVTPERVPTHIVDYSEAEQSDEQLHQEISQANVICIVYAVNNKHSIDKVTSRWIPLINERTDKDSRLPLILVGNKSDLV---EYSSMETIL-PIMNQYTEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKEMKPACIKALTRIFKISDQDNDG 215
BLAST of FC925546 vs. ExPASy Swiss-Prot
Match: MIRO2_BOVIN (Mitochondrial Rho GTPase 2 OS=Bos taurus GN=RHOT2 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.687e-36 Identity = 82/189 (43.39%), Postives = 119/189 (62.96%), Query Frame = 3 Query: 183 KSSLIAAAATESVPEKVPPVHAPTRLPPDFYPDRVPVTIIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLPELR---RLEIKVPIIVAGCKLDLRGDHNATSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCRQALKRIFIICDHDMD 740 K+SLI + E PE+VP +P D P++VP I+D S + + +L E+ +AD V + Y ++++T+ ++ + W+P + + +VPII+ G K DLR S+E V+ PIM QF EIETCVECSA + + ++FYYAQKAVLHPTAPL+D + + L+P C QAL RIF + D DMD Sbjct: 17 KTSLILSLVGEEFPEEVPARAEEITIPADVTPEKVPTHIVDYSETEQTVEELQGEIDKADVVCVVYDVSEEATVEKIRTKWIPLVNGDTKRGPRVPIILVGNKSDLRP---GGSMEAVL-PIMSQFPEIETCVECSAKNLKNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRIFRLSDQDMD 201 The following BLAST results are available for this feature:
BLAST of FC925546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925546 ID=FC925546; Name=FC925546; organism=Citrus clementina; type=EST; length=745bpback to top |