FC925560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925560 vs. ExPASy Swiss-Prot
Match: THI4_CITSI (Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1) HSP 1 Score: 340.887 bits (873), Expect = 3.529e-93 Identity = 173/195 (88.72%), Postives = 178/195 (91.28%), Query Frame = 2 Query: 77 MAAMTSTAFPPSVSSTTNKLFDSSFHGAPMSPSLLRLPPIKSSRPNNLSISASASPPYDLNTFKFDPSKQSIASREMTPTYMTDMITYADTDXXXXGAGSAGLSCAYELNKNPNIQIAIIQQSATPGGGPWLGGQLFSAMVVPKPSHIFLDELGIHYDEQDTYVVIKHAALFTSTIMSKLLARPNVKLFNAVPAE 661 MAAM STAF PSVSSTTNKLFDSSFHGAPMSPSLLRL PIKSSRPNNLSISASASPPYDLNTFKFDP K+SI SREMT YMTDMITYADTD GAGSAGLSCAYEL+KNPNIQIAII+QS +PGGG WLGGQLFSAMVV KP+HIFLDELGI YDEQD YVVIKHAALFTSTIMSKLLARPNVKLFNAV AE Sbjct: 1 MAAMASTAFAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAE 195
BLAST of FC925560 vs. ExPASy Swiss-Prot
Match: THI4_ALNGL (Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 8.193e-66 Identity = 127/193 (65.80%), Postives = 150/193 (77.72%), Query Frame = 2 Query: 83 AMTSTAFPPSVSSTTNKLFDSSFHGAPMSPSLLRLPPIKSSRPNNLSISASASPPYDLNTFKFDPSKQSIASREMTPTYMTDMITYADTDXXXXGAGSAGLSCAYELNKNPNIQIAIIQQSATPGGGPWLGGQLFSAMVVPKPSHIFLDELGIHYDEQDTYVVIKHAALFTSTIMSKLLARPNVKLFNAVPAE 661 A T T+ P ++ N SSF+G P++PS +R+ P K+ ++S+S + SPPYDL F FDP K+SI SREMT YM DMITYADTD GAGS+GL C YEL+KNP++Q+AII+QS +PGGG WLGGQLFS MVV KP+H+FLDELGI YDEQD YVVIKHAALFTSTIMSKLLARPNVKLFNAV AE Sbjct: 2 ASTLTSKPQRLALFENSA--SSFYGTPLAPSSIRVQPTKAGAKPSISMSGAPSPPYDLKAFTFDPIKESIVSREMTRRYMMDMITYADTDVVVVGAGSSGLVC-YELSKNPSVQVAIIEQSVSPGGGAWLGGQLFSGMVVRKPAHLFLDELGIEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAE 191
BLAST of FC925560 vs. ExPASy Swiss-Prot
Match: THI4_ARATH (Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 3.113e-65 Identity = 129/196 (65.82%), Postives = 156/196 (79.59%), Query Frame = 2 Query: 77 MAAMTSTAFPPSVSSTT-NKLFDSSFHGAPMSPSLLRLPPIKSSRPNNLSISASASPPYDLNTFKFDPSKQSIASREMTPTYMTDMITYADTDXXXXGAGSAGLSCAYELNKNPNIQIAIIQQSATPGGGPWLGGQLFSAMVVPKPSHIFLDELGIHYDEQDTYVVIKHAALFTSTIMSKLLARPNVKLFNAVPAE 661 MAA+ ST S+SST +LFDSSFHG+ +S + + + +P + S+ A+ + YDLN F FDP K+SI SREMT YMTDMITYA+TD GAGSAGLS AYE++KNPN+Q+AII+QS +PGGG WLGGQLFSAM+V KP+H+FLDE+G+ YDEQDTYVV+KHAALFTSTIMSKLLARPNVKLFNAV AE Sbjct: 1 MAAIASTL---SLSSTKPQRLFDSSFHGSAISAAPISI----GLKPRSFSVRATTAG-YDLNAFTFDPIKESIVSREMTRRYMTDMITYAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAE 188
BLAST of FC925560 vs. ExPASy Swiss-Prot
Match: THI41_MAIZE (Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.073e-57 Identity = 118/193 (61.14%), Postives = 141/193 (73.06%), Query Frame = 2 Query: 116 SSTTNKLFDSSFHGAPMSPSLLRLPPIK----------SSRPNNLSISASAS-PPYDLNTFKFDPSKQSIASREMTPTYMTDMITYADTDXXXXGAGSAGLSCAYELNKNPNIQIAIIQQSATPGGGPWLGGQLFSAMVVPKPSHIFLDELGIHYDEQDTYVVIKHAALFTSTIMSKLLARPNVKLFNAVPAE 661 ++ + L SSF G+ + P+ R P + P S+S S+S PPYDL +F+F P K+SI SREMT YMTDMITYADTD GAGSAGLSCAYEL+K+P + IAI++QS +PGGG WLGGQLFSAMVV KP+H+FLDELG+ YDE + YVVIKHAALFTST+MS LLARPNVKLFNAV E Sbjct: 3 TAAASSLLKSSFAGSRL-PAATRTTPASLVVATGPRGAGAGPICASMSMSSSNPPYDLTSFRFSPIKESIVSREMTRRYMTDMITYADTDVVIVGAGSAGLSCAYELSKDPAVSIAIVEQSVSPGGGAWLGGQLFSAMVVRKPAHLFLDELGVAYDEAEDYVVIKHAALFTSTVMSLLLARPNVKLFNAVAVE 194
BLAST of FC925560 vs. ExPASy Swiss-Prot
Match: THI42_MAIZE (Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 1.829e-57 Identity = 115/191 (60.21%), Postives = 140/191 (73.30%), Query Frame = 2 Query: 116 SSTTNKLFDSSFHGAPMSPSLLRLP---------PIKSSRPNNLSISASASPPYDLNTFKFDPSKQSIASREMTPTYMTDMITYADTDXXXXGAGSAGLSCAYELNKNPNIQIAIIQQSATPGGGPWLGGQLFSAMVVPKPSHIFLDELGIHYDEQDTYVVIKHAALFTSTIMSKLLARPNVKLFNAVPAE 661 ++ + L SSF G+ + PS R P P SIS S +PPYDL +F+F P K+SI SREMT YMTDMIT+ADTD GAGSAGLSCAYEL+K+P + +AI++QS +PGGG WLGGQLFSAMVV +P+H+FLDELG+ YDE + YVV+KHAALFTST+MS+LLARPNVKLFNAV E Sbjct: 3 TTAASSLLKSSFAGSRL-PSATRTTTPSSVAVATPRAGGGPIRASIS-SPNPPYDLTSFRFSPIKESIVSREMTRRYMTDMITHADTDVVIVGAGSAGLSCAYELSKDPTVSVAIVEQSVSPGGGAWLGGQLFSAMVVRRPAHLFLDELGVGYDEAEDYVVVKHAALFTSTVMSRLLARPNVKLFNAVAVE 191
BLAST of FC925560 vs. ExPASy Swiss-Prot
Match: THI2_SCHPO (Thiazole biosynthetic enzyme, mitochondrial OS=Schizosaccharomyces pombe GN=thi2 PE=2 SV=2) HSP 1 Score: 159.844 bits (403), Expect = 1.115e-38 Identity = 79/146 (54.11%), Postives = 107/146 (73.29%), Query Frame = 2 Query: 230 ASASPPYDLN-TFKFDPSKQSIASREMTPTYMTDMITYADTDXXXXGAGSAGLSCAYELN-KNPNIQIAIIQQSATPGGGPWLGGQLFSAMVVPKPSHIFLDELGIHYDEQDTYVVIKHAALFTSTIMSKLLARPNVKLFNAVPAE 661 + A P Y L+ +F F P ++S SR MT Y +D+ YA++D GAGSAGL+ AY + + P+++IAII+ S PGGG WLGGQLFSAMVV KP+ +FL+E+G+ Y+++ YVV+KHAALFTST+M++ LA PNVKLFNA E Sbjct: 37 SKAYPTYSLDESFSFAPIRESTVSRAMTRRYFSDLDKYAESDIVIVGAGSAGLTAAYYIGTRRPDLKIAIIEASVAPGGGAWLGGQLFSAMVVRKPADLFLNEIGVPYEDEGDYVVVKHAALFTSTVMARTLALPNVKLFNATAVE 182
BLAST of FC925560 vs. ExPASy Swiss-Prot
Match: THI4_FUSOX (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium oxysporum GN=STI35 PE=2 SV=2) HSP 1 Score: 155.221 bits (391), Expect = 2.746e-37 Identity = 77/134 (57.46%), Postives = 98/134 (73.13%), Query Frame = 2 Query: 263 FKFDPSKQSIASREMTPTYMTDMITYADTDXXXXGAGSAGLSCAYELNKN-PNIQIAIIQQSATPGGGPWLGGQLFSAMVVPKPSHIFLDELGIHYDEQDTYVVIKHAALFTSTIMSKLLARPNVKLFNAVPAE 661 FKF P ++S SR MT Y D+ YA++D GAGS GLS AY L K P+++IAII+ S +PGGG WLGGQLFSAM++ KP+ FL E+G+ Y+++ YVV+KHAALFTSTIMSK+L PN+KLFNA E Sbjct: 44 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIIGAGSCGLSAAYILGKKRPDLKIAIIEASVSPGGGAWLGGQLFSAMIMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVLQMPNIKLFNATCVE 177
BLAST of FC925560 vs. ExPASy Swiss-Prot
Match: THI4_YEAST (Thiazole biosynthetic enzyme, mitochondrial OS=Saccharomyces cerevisiae GN=THI4 PE=1 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 7.991e-37 Identity = 76/138 (55.07%), Postives = 99/138 (71.74%), Query Frame = 2 Query: 251 DLNTFKFDPSKQSIASREMTPTYMTDMITYADTDXXXXGAGSAGLSCAYELNKN-PNIQIAIIQQSATPGGGPWLGGQLFSAMVVPKPSHIFLDELGIHYDEQDTYVVIKHAALFTSTIMSKLLARPNVKLFNAVPAE 661 D + FKF P ++S SR MT Y D+ +A +D GAGS+GLS AY + KN P++++ II+ S PGGG WLGGQLFSAMV+ KP+H+FL EL I Y+++ YVV+KHAALF ST++SK+L PNVKLFNA E Sbjct: 34 DWSDFKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVE 171
BLAST of FC925560 vs. ExPASy Swiss-Prot
Match: THI4_FUSSH (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium solani subsp. phaseoli GN=STI35 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 7.991e-37 Identity = 87/181 (48.07%), Postives = 114/181 (62.98%), Query Frame = 2 Query: 164 MSPSLLRLPPIKSSR---------PNNLSISASASPPYD-----LNTFKFDPSKQSIASREMTPTYMTDMITYADTDXXXXGAGSAGLSCAYELNKN-PNIQIAIIQQSATPGGGPWLGGQLFSAMVVPKPSHIFLDELGIHYDEQDTYVVIKHAALFTSTIMSKLLARPNVKLFNAVPAE 661 MSP PP +S+ P LS +++A+ + + FKF P ++S SR MT Y D+ YA++D GAGS GLS Y L K P+++IAII+ S +PGGG WLGGQLFSAMV+ KP+ FL E+G+ Y+++ YVV+KHAALFTSTIMSK+L PN KLFNA E Sbjct: 1 MSPPAAVSPPARSAELASAPAVKLPVGLSKNSAAATTVEEMEGKWDDFKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIVGAGSCGLSTRYILGKKRPDLKIAIIEASVSPGGGAWLGGQLFSAMVMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVLQLPNCKLFNATCVE 181
BLAST of FC925560 vs. ExPASy Swiss-Prot
Match: THI4_ASPOR (Thiazole biosynthetic enzyme, mitochondrial OS=Aspergillus oryzae GN=thiA PE=3 SV=2) HSP 1 Score: 151.754 bits (382), Expect = 3.037e-36 Identity = 77/136 (56.62%), Postives = 100/136 (73.53%), Query Frame = 2 Query: 263 FKFDPSKQSIASREMTPTYMTDMITYADTDXXXXGAGSAGLSCAYELNK-NPNIQIAIIQQSATPGGGPWLGGQLFSAMVVPKPSHIFLDELGIHYDE--QDTYVVIKHAALFTSTIMSKLLARPNVKLFNAVPAE 661 FKF P ++S SR MT Y D+ YA++D GAGS GLS AY L K P+++IAI++ S +PGGG WLGGQLFSAMV+ +P+ +FL+ELG+ Y+E YVV+KHA+LFTST+MSK+L+ PNVKLFNA E Sbjct: 48 FKFAPIRESQVSRAMTRRYFEDLDKYAESDVVIVGAGSCGLSTAYVLAKARPDLKIAIVEASVSPGGGAWLGGQLFSAMVMRRPAEVFLNELGVPYEEDANPNYVVVKHASLFTSTLMSKVLSFPNVKLFNATAVE 183 The following BLAST results are available for this feature:
BLAST of FC925560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925560 ID=FC925560; Name=FC925560; organism=Citrus clementina; type=EST; length=662bpback to top |