FC925597
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925597 vs. ExPASy Swiss-Prot
Match: UBP19_ARATH (Ubiquitin carboxyl-terminal hydrolase 19 OS=Arabidopsis thaliana GN=UBP19 PE=2 SV=2) HSP 1 Score: 206.838 bits (525), Expect = 8.846e-53 Identity = 112/204 (54.90%), Postives = 136/204 (66.67%), Query Frame = 2 Query: 2 KRLTFRRAPNILTIALKRFQSGRFGKLNKRVTFPETLDLSPYMSDGGDRTDVYKLYAVVVHVDMLNASFFGHYICYVKDFRGHWYRVDDCKVTSVDLEEVLSQGAYMLLYNRVSARPSYLVDTESSSSRKEEPSAVNAETEPKEVECSSTMESINPNSRSLSLPCDD-FSHLRVSSC-KSKSAGAIDPQAVPAHFKDTNVDNIE 607 KRL+ R APNILTIALKRFQ GRFGKLNKR++FPET DL PYMS GG+ +DVYKLYAV+VH+DMLNASFFGHYICYVKDFRG+WYR+DD +V V+LE+VLSQ AYMLLY+RV RPS L ES +K + +N E+ + S + N S+S C+ SH K S A P + D VD ++ Sbjct: 368 KRLSIRCAPNILTIALKRFQGGRFGKLNKRISFPETFDLGPYMSGGGEGSDVYKLYAVIVHLDMLNASFFGHYICYVKDFRGNWYRIDDSEVEKVELEDVLSQRAYMLLYSRVQPRPSNLRSEESQDEKKTD--TLNTESNQ---DGSVESSGVGTNDTSVSSLCNGIISHSEDPEYEKESSLSASVPVSEEGKEVDVKVDTVD 566
BLAST of FC925597 vs. ExPASy Swiss-Prot
Match: UBP18_ARATH (Ubiquitin carboxyl-terminal hydrolase 18 OS=Arabidopsis thaliana GN=UBP18 PE=2 SV=2) HSP 1 Score: 202.601 bits (514), Expect = 1.668e-51 Identity = 99/158 (62.66%), Postives = 126/158 (79.75%), Query Frame = 2 Query: 2 KRLTFRRAPNILTIALKRFQSGRFGKLNKRVTFPETLDLSPYMSDGGDRTDVYKLYAVVVHVDMLNASFFGHYICYVKDFRGHWYRVDDCKVTSVDLEEVLSQGAYMLLYNRVSARPSYLVDTESSSSRKEEPSAVNAETEPKEVECSSTMESINPNS 475 KRLT RRAPNILTIALKR+Q GR+GKLNKR++FPETLDL+PYMS+GGD +DVYKLYAV+VH+DMLNASFFGHYICY+KDF G+WYR+DD ++ SV+LE+VLSQ AYMLLY+R+ AR S S +++ ++ E+ KE+ SS + +I S Sbjct: 362 KRLTIRRAPNILTIALKRYQGGRYGKLNKRISFPETLDLNPYMSEGGDGSDVYKLYAVIVHLDMLNASFFGHYICYIKDFCGNWYRIDDSEIESVELEDVLSQRAYMLLYSRIQARSSSSC-LRSEVKDEKKTDTLDTESCVKELVESSMVGAIESRS 518
BLAST of FC925597 vs. ExPASy Swiss-Prot
Match: UBP16_ARATH (Ubiquitin carboxyl-terminal hydrolase 16 OS=Arabidopsis thaliana GN=UBP16 PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.161e-36 Identity = 76/165 (46.06%), Postives = 110/165 (66.67%), Query Frame = 2 Query: 2 KRLTFRRAPNILTIALKRFQSGRFGKLNKRVTFPETLDLSPYMSDGGDRTDVYKLYAVVVHVDMLNASFFGHYICYVKDFRGHWYRVDDCKVTSVDLEEVLSQGAYMLLYNRVSARPSYL---VDTESSSSRKEEPSAVNAETEPKEVECSSTMESINPNSRSLS 487 K+L PN+LTIALKRFQ+G+FGKLNK + FPETLDL+PY+S G +++ YKLY V+VH+D++NA+F GHY+CY+++ + WY+ DD V + D+E +L++GAYML Y R + P L TE+S+ + P PK E S+ S++ +S LS Sbjct: 736 KKLKITEPPNVLTIALKRFQAGKFGKLNKLIRFPETLDLAPYVSGGSEKSHDYKLYGVIVHLDVMNAAFSGHYVCYIRN-QNKWYKADDSTVVTSDVERILTKGAYMLFYARCTPTPPRLAVCTKTEASNKKSRVPL-------PKANEKSTISRSVSTSSPELS 892
BLAST of FC925597 vs. ExPASy Swiss-Prot
Match: UBP15_ARATH (Ubiquitin carboxyl-terminal hydrolase 15 OS=Arabidopsis thaliana GN=UBP15 PE=2 SV=2) HSP 1 Score: 151.754 bits (382), Expect = 3.377e-36 Identity = 80/173 (46.24%), Postives = 109/173 (63.01%), Query Frame = 2 Query: 2 KRLTFRRAPNILTIALKRFQSGRFGKLNKRVTFPETLDLSPYMSDGGDRTDVYKLYAVVVHVDMLNASFFGHYICYVKDFRGHWYRVDDCKVTSVDLEEVLSQGAYMLLYNRVSARP--------SYLVDTESSSSRKEEPSAVN---AETEPKEVECSSTMESINPNSRSLS 487 K L+ APNILTI LKRFQ GR+GK+NK ++FPE LD+ P+M+ GD +Y LYAV+VH+D LNASF GHYI YVKD RG+WYR+DD ++ V + +V+S+GAYML Y R RP + + ++ + KE+ VN + K E SS+ S+ +S S Sbjct: 632 KELSIHEAPNILTIVLKRFQEGRYGKINKCISFPEMLDMIPFMTRTGDVPPLYMLYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHPVPMTQVMSEGAYMLFYMRSYPRPQRGEHNGKAPVHHSQPRNEMKEQRKPVNRFKPRADHKNTESSSSEWSLFTSSDEAS 804
BLAST of FC925597 vs. ExPASy Swiss-Prot
Match: UBP17_ARATH (Ubiquitin carboxyl-terminal hydrolase 17 OS=Arabidopsis thaliana GN=UBP17 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.495e-33 Identity = 83/189 (43.92%), Postives = 111/189 (58.73%), Query Frame = 2 Query: 2 KRLTFRRAPNILTIALKRFQSGRFGKLNKRVTFPETLDLSPYMSDG--GDRTDVYKLYAVVVHVDMLNASFFGHYICYVKDFRGHWYRVDDCKVTSVDLEEVLSQGAYMLLYNRVSARPSYLVDTESSSSRKEEPSAVNAETEPK--EVECSSTMESINPNSRSLSLPCDDFSHLRVSSCKSKSAGAID 556 K+L PNILT+ LKRFQS FGKL+K + FPE LD+SPYMSD GD VY LYAVVVH+D ++ F GHY+CY+K G W+++DD V V LE VL +GAYMLLY R S RP S R+ + + + K + + +S + ++ +S SLS S SSC +K + I+ Sbjct: 520 KKLMILEGPNILTVVLKRFQSDNFGKLSKPIHFPELLDISPYMSDPNHGDHP-VYSLYAVVVHLDAMSTLFSGHYVCYIKTLDGDWFKIDDSNVFPVQLETVLLEGAYMLLYARDSPRPVSKNGGRKSKQRRNLAAIPSRKGNKKQRDGDNNSLLPRVDWSSGSLSSMFS--SSDTTSSCSTKDSSGIE 705
BLAST of FC925597 vs. ExPASy Swiss-Prot
Match: UBP36_HUMAN (Ubiquitin carboxyl-terminal hydrolase 36 OS=Homo sapiens GN=USP36 PE=1 SV=3) HSP 1 Score: 102.449 bits (254), Expect = 2.350e-21 Identity = 57/139 (41.01%), Postives = 79/139 (56.83%), Query Frame = 2 Query: 2 KRLTFRRAPNILTIALKRFQSGRFGKLNKRVTFPETLDLSPYMSDGGDRTDVYKLYAVVVHVDMLNASFFGHYICYVKDFRGHWYRVDDCKVTSVDLEEVLSQGAYMLLYNRV---SARPSYLVDTESSSSRKEEPSAV 409 KR T R N+LT++LKRF + GK+ K V +PE L++ PYMS +Y LYAV+VH + GHY CYVK G WY+++D V S +++ VL+Q AY+L Y R+ P L+ SSS PS + Sbjct: 313 KRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQNNGDPVMYGLYAVLVHSGY--SCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLRIPGSKKSPEGLISRTGSSSLPGRPSVI 449
BLAST of FC925597 vs. ExPASy Swiss-Prot
Match: UBP42_HUMAN (Ubiquitin carboxyl-terminal hydrolase 42 OS=Homo sapiens GN=USP42 PE=1 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 5.234e-21 Identity = 52/112 (46.43%), Postives = 69/112 (61.61%), Query Frame = 2 Query: 2 KRLTFRRAPNILTIALKRFQSGRFGKLNKRVTFPETLDLSPYMSDGGDRTDVYKLYAVVVHVDMLNASFFGHYICYVKDFRGHWYRVDDCKVTSVDLEEVLSQGAYMLLYNR 337 KR T R+ N+LT++LKRF + GK+ K V +PE LD+ PYMS VY LYAV+VH GHY CY+K G WY+++D V++ D+ VLSQ AY+L Y R Sbjct: 302 KRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIVYVLYAVLVHTGF--NCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIR 411
BLAST of FC925597 vs. ExPASy Swiss-Prot
Match: U17L2_HUMAN (Ubiquitin carboxyl-terminal hydrolase 17-like protein 2 OS=Homo sapiens GN=USP17L2 PE=1 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.523e-20 Identity = 59/139 (42.45%), Postives = 74/139 (53.24%), Query Frame = 2 Query: 2 KRLTFRRAPNILTIALKRFQSGRFGKLNKRVTFPETLDLSPYMSDGGDRTDVYKLYAVVVHVDMLNASFFGHYICYVKDFRGHWYRVDDCKVTSVDLEEVLSQGAYMLLYNRVSARPSYLVDTESSSSRKEEPSAVNAE 418 K LT + +L + LKRF KL K V +PE LD+ PYMS VY LYAV+VH + GHY YVK G WY++DD KVT+ + VLSQ AY+L Y + S + S SR EP A+ AE Sbjct: 265 KTLTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGW--SCHDGHYFSYVKAQEGQWYKMDDAKVTACSITSVLSQQAYVLFYIQKSEWERH----SESVSRGREPRALGAE 397
BLAST of FC925597 vs. ExPASy Swiss-Prot
Match: UBP36_MOUSE (Ubiquitin carboxyl-terminal hydrolase 36 OS=Mus musculus GN=Usp36 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.871e-20 Identity = 50/113 (44.25%), Postives = 70/113 (61.95%), Query Frame = 2 Query: 2 KRLTFRRAPNILTIALKRFQSGRFGKLNKRVTFPETLDLSPYMSDGGDRTDVYKLYAVVVHVDMLNASFFGHYICYVKDFRGHWYRVDDCKVTSVDLEEVLSQGAYMLLYNRV 340 KR T R N+LT++LKRF + GK+ K V +PE L++ PYMS +Y LYAV+VH + GHY CYVK G WY+++D V S +++ VL+Q AY+L Y R+ Sbjct: 313 KRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSSGDPVMYGLYAVLVHSGY--SCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLRI 423
BLAST of FC925597 vs. ExPASy Swiss-Prot
Match: UBP17_HUMAN (Ubiquitin carboxyl-terminal hydrolase 17 OS=Homo sapiens GN=USP17A PE=1 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 9.871e-20 Identity = 57/139 (41.01%), Postives = 74/139 (53.24%), Query Frame = 2 Query: 2 KRLTFRRAPNILTIALKRFQSGRFGKLNKRVTFPETLDLSPYMSDGGDRTDVYKLYAVVVHVDMLNASFFGHYICYVKDFRGHWYRVDDCKVTSVDLEEVLSQGAYMLLYNRVSARPSYLVDTESSSSRKEEPSAVNAE 418 K LT + +L + LKRF K+ K V +PE LD+ PYMS VY LYAV+VH + GHY YVK G WY++DD +VT+ + VLSQ AY+L Y + S + S SR EP A+ AE Sbjct: 265 KTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGW--SCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERH----SESVSRGREPRALGAE 397 The following BLAST results are available for this feature:
BLAST of FC925597 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925597 ID=FC925597; Name=FC925597; organism=Citrus clementina; type=EST; length=698bpback to top |