FC925598
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925598 vs. ExPASy Swiss-Prot
Match: ATB40_ARATH (Homeobox-leucine zipper protein ATHB-40 OS=Arabidopsis thaliana GN=ATHB-40 PE=2 SV=2) HSP 1 Score: 177.563 bits (449), Expect = 4.850e-44 Identity = 98/171 (57.31%), Postives = 125/171 (73.10%), Query Frame = 3 Query: 111 NHQVEDNKSNMVLLSQFYPSDVLTPTGIVPQQGEPSKPKRRQRKRN---TNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKMSELIEGISLHNP 614 N+ V+D NM +SQ YP DV T IV GE +PKRR++K + +GG +KRKLT EQ +LEM FG+EHKLES+RKD+LAAELGLDPRQVAVWFQNRRAR K K++EE Y LK +H+NVVV+K RLESEV LKE+L AE+EI++++E +EG S ++P Sbjct: 2 NYTVDDQ--NMAFISQLYP-DVYTQ--IVQPVGEVKQPKRRRKKTKGSVASADGGNGLFRKRKLTDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEEEYNKLKNSHDNVVVDKCRLESEVIQLKEQLYDAEREIQRLAERVEGGSSNSP 167
BLAST of FC925598 vs. ExPASy Swiss-Prot
Match: ATB21_ARATH (Homeobox-leucine zipper protein ATHB-21 OS=Arabidopsis thaliana GN=ATHB-21 PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.942e-41 Identity = 93/184 (50.54%), Postives = 132/184 (71.74%), Query Frame = 3 Query: 111 NHQVEDNKSNMVLLSQFYPSDVLTPTGIVPQQGEPSKPKRRQRKRNTN----------GNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKMSELIEGISLHNPSATIPT 632 N V+D+ N++L+SQ YP+ V TP +VPQQG +KP RR+++++ + GNG FR KRKL+ EQ +LE+ F ++HKLES+RKD+LA+ELGLDPRQVAVWFQNRRAR K K++E+ Y LK A+E VVEK RL+SEV LKE+L AE+EI+++++ +EG ++P ++ T Sbjct: 3 NQNVDDH--NLLLISQLYPN-VYTP--LVPQQGGEAKPTRRRKRKSKSVVVAEEGENEGNGWFR---KRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKRVEDEYTKLKNAYETTVVEKCRLDSEVIHLKEQLYEAEREIQRLAKRVEGTLSNSPISSSVT 178
BLAST of FC925598 vs. ExPASy Swiss-Prot
Match: ATB53_ARATH (Homeobox-leucine zipper protein ATHB-53 OS=Arabidopsis thaliana GN=ATHB-53 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.157e-37 Identity = 88/179 (49.16%), Postives = 117/179 (65.36%), Query Frame = 3 Query: 141 MVLLSQFYPSDVLTPTG--IVPQQ---GEPSKPKRRQRKRNTNGNGGFRA---------LKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKMSELIEGISLHNPSATIPTD 635 M+L SQ YP I+ Q GE SKP +R+RKR + G+ L+KRKLT EQ +LE FGNEHKLES RK+K+A ELGLDPRQVAVWFQNRRAR K KK+EE YA LK H+NVV+ + +LES++ L E+LS A+ EI+K+SE +E + ++ S+++ + Sbjct: 11 MMLGSQVYPYTTQPQNSHCIIVNQIDGGEESKPVKRRRKRRSKGSSATNEEDVAEIGGMLRKRKLTDEQVNMLEYSFGNEHKLESGRKEKIAGELGLDPRQVAVWFQNRRARWKNKKLEEEYAKLKNHHDNVVLGQCQLESQILKLTEQLSEAQSEIRKLSERLEEMPTNSSSSSLSVE 189
BLAST of FC925598 vs. ExPASy Swiss-Prot
Match: HOX14_ORYSJ (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. japonica GN=HOX14 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.407e-29 Identity = 70/158 (44.30%), Postives = 104/158 (65.82%), Query Frame = 3 Query: 126 DNKSNMVLLSQFYPSDVLTPTGIVPQQGEPSKPKRRQRK--RNTNGNGGFRAL-----KKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKM 578 + + + + + + +L +G V QGE + +RR+R+ R G GG + KKR+L+ EQ E+LE+ F E KLE+ RK LA+ELGLDP+QVAVWFQNRRAR K+K +EE ++ LK AH+ ++ K LE+EV LKE+L VAE+E++++ Sbjct: 6 EKQQQQQMFASYVDASLLAASGEV--QGERPRARRRRRRGARCVGGGGGGGEVDGGDPKKRRLSDEQVEMLELSFREERKLETGRKVHLASELGLDPKQVAVWFQNRRARHKSKLLEEEFSKLKHAHDAAILHKCHLENEVLRLKERLVVAEEEVRRL 161
BLAST of FC925598 vs. ExPASy Swiss-Prot
Match: HOX14_ORYSI (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. indica GN=HOX14 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.407e-29 Identity = 70/158 (44.30%), Postives = 104/158 (65.82%), Query Frame = 3 Query: 126 DNKSNMVLLSQFYPSDVLTPTGIVPQQGEPSKPKRRQRK--RNTNGNGGFRAL-----KKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKM 578 + + + + + + +L +G V QGE + +RR+R+ R G GG + KKR+L+ EQ E+LE+ F E KLE+ RK LA+ELGLDP+QVAVWFQNRRAR K+K +EE ++ LK AH+ ++ K LE+EV LKE+L VAE+E++++ Sbjct: 6 EKQQQQQMFASYVDASLLAASGEV--QGERPRARRRRRRGARCVGGGGGGGEVDGGDPKKRRLSDEQVEMLELSFREERKLETGRKVHLASELGLDPKQVAVWFQNRRARHKSKLLEEEFSKLKHAHDAAILHKCHLENEVLRLKERLVVAEEEVRRL 161
BLAST of FC925598 vs. ExPASy Swiss-Prot
Match: HOX12_ORYSJ (Homeobox-leucine zipper protein HOX12 OS=Oryza sativa subsp. japonica GN=HOX12 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.673e-26 Identity = 64/133 (48.12%), Postives = 90/133 (67.67%), Query Frame = 3 Query: 207 GEPSKPKRRQRKRN--------TNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKMS 581 GE K ++R+R++ +GG KKR+L+ EQA LEM F E KLE+ RK +LAAELGLD +QVAVWFQNRRAR K+K +EE +A L++AH+ VV++ LE+E+ LKE+L+ E+E K++ Sbjct: 29 GEQKKARQRRRRKVKPEAAAALAGESGGDEQAKKRRLSDEQARFLEMSFKKERKLETPRKVQLAAELGLDAKQVAVWFQNRRARHKSKLMEEEFAKLRSAHDAVVLQNCHLETELLKLKERLADVEEEKAKLA 161
BLAST of FC925598 vs. ExPASy Swiss-Prot
Match: HOX12_ORYSI (Homeobox-leucine zipper protein HOX12 OS=Oryza sativa subsp. indica GN=HOX12 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.673e-26 Identity = 64/133 (48.12%), Postives = 90/133 (67.67%), Query Frame = 3 Query: 207 GEPSKPKRRQRKRN--------TNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKMS 581 GE K ++R+R++ +GG KKR+L+ EQA LEM F E KLE+ RK +LAAELGLD +QVAVWFQNRRAR K+K +EE +A L++AH+ VV++ LE+E+ LKE+L+ E+E K++ Sbjct: 29 GEQKKARQRRRRKVKPEAAAALAGESGGDEQAKKRRLSDEQARFLEMSFKKERKLETPRKVQLAAELGLDAKQVAVWFQNRRARHKSKLMEEEFAKLRSAHDAVVLQNCHLETELLKLKERLADVEEEKAKLA 161
BLAST of FC925598 vs. ExPASy Swiss-Prot
Match: HAT5_ARATH (Homeobox-leucine zipper protein HAT5 OS=Arabidopsis thaliana GN=HAT5 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.192e-20 Identity = 52/97 (53.61%), Postives = 68/97 (70.10%), Query Frame = 3 Query: 279 KKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTA-------HENVVVEKTRLESEVATLKEKL 548 KKR+LT EQ LLE F E+KLE +RK +LA +LGL PRQVAVWFQNRRAR KTK++E Y LK+ ++++V++ +L SEV +L EKL Sbjct: 68 KKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEKL 164
BLAST of FC925598 vs. ExPASy Swiss-Prot
Match: HOX16_ORYSJ (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. japonica GN=HOX16 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.165e-19 Identity = 52/101 (51.49%), Postives = 67/101 (66.34%), Query Frame = 3 Query: 279 KKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTA-------HENVVVEKTRLESEVATLKEKLSVAE 560 KKR+LT EQ LLE F E+KLE +RK +LA +LGL PRQVAVWFQNRRAR KTK++E + LK + H+ ++ + RL S+V +L EKL E Sbjct: 77 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSLTEKLQEKE 177
BLAST of FC925598 vs. ExPASy Swiss-Prot
Match: HOX16_ORYSI (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. indica GN=HOX16 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.165e-19 Identity = 52/101 (51.49%), Postives = 67/101 (66.34%), Query Frame = 3 Query: 279 KKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTA-------HENVVVEKTRLESEVATLKEKLSVAE 560 KKR+LT EQ LLE F E+KLE +RK +LA +LGL PRQVAVWFQNRRAR KTK++E + LK + H+ ++ + RL S+V +L EKL E Sbjct: 79 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSLTEKLQEKE 179 The following BLAST results are available for this feature:
BLAST of FC925598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925598 ID=FC925598; Name=FC925598; organism=Citrus clementina; type=EST; length=638bpback to top |