FC925600

Overview
NameFC925600
Unique NameFC925600
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length581
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925600 vs. ExPASy Swiss-Prot
Match: GDL82_ARATH (GDSL esterase/lipase At5g45670 OS=Arabidopsis thaliana GN=At5g45670 PE=2 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 1.276e-66
Identity = 124/166 (74.70%), Postives = 143/166 (86.14%), Query Frame = 2
Query:   83 VVMVLLVLINIQNYYYGAKAAPQVPCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFPNGPTGRFSNGKTTVDVIAQLLGFDGYIPPYSAARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHY 580
            ++MV + +INI      AK+ P  PCYFIFGDSLVDNGNNNQL SLARANY PYGIDF  GPTGRFSNG TTVDVIAQLLGF+ YI PY++ARGQDILRGVNYASAAAGIR+ETGRQLG RI+F+GQV N+ NTV QVVN+LG++++A+NYLS+CIYSIGLGSN Y
Sbjct:   10 MIMVAVTMINI------AKSDPIAPCYFIFGDSLVDNGNNNQLQSLARANYFPYGIDFAAGPTGRFSNGLTTVDVIAQLLGFEDYITPYASARGQDILRGVNYASAAAGIRDETGRQLGGRIAFAGQVANHVNTVSQVVNILGDQNEASNYLSKCIYSIGLGSNDY 169          
BLAST of FC925600 vs. ExPASy Swiss-Prot
Match: GDL65_ARATH (GDSL esterase/lipase At4g18970 OS=Arabidopsis thaliana GN=At4g18970 PE=2 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 7.000e-65
Identity = 122/165 (73.94%), Postives = 139/165 (84.24%), Query Frame = 2
Query:   86 VMVLLVLINIQNYYYGAKAAPQVPCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFPNGPTGRFSNGKTTVDVIAQLLGFDGYIPPYSAARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHY 580
            V V+++ + I      A   P  PCYFIFGDSLVD+GNNN+L+SLARANY PYGIDF  GPTGRFSNGKTTVDVI +LLGFD YI PYS ARG+DILRGVNYASAAAGIREETGRQLG RI+F+GQV N+ NTV QVVN+LG+E++AANYLS+CIYSIGLGSN Y
Sbjct:    4 VCVMMMAMAIAMAMNIAMGDPIAPCYFIFGDSLVDSGNNNRLTSLARANYFPYGIDFQYGPTGRFSNGKTTVDVITELLGFDDYITPYSEARGEDILRGVNYASAAAGIREETGRQLGARITFAGQVANHVNTVSQVVNILGDENEAANYLSKCIYSIGLGSNDY 168          
BLAST of FC925600 vs. ExPASy Swiss-Prot
Match: GDL14_ARATH (GDSL esterase/lipase At1g29660 OS=Arabidopsis thaliana GN=At1g29660 PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 2.037e-64
Identity = 120/171 (70.18%), Postives = 142/171 (83.04%), Query Frame = 2
Query:   68 LRKWWVVMVLLVLINIQNYYYGAKAAPQVPCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFPNGPTGRFSNGKTTVDVIAQLLGFDGYIPPYSAARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHY 580
            LRKW +V V ++L+ +    +  KA PQVPCYFIFGDSLVDNGNNN+L S+ARA+Y PYGIDF  GPTGRFSNG+TTVDV+ +LLGFD YIP YS   GQ+IL+GVNYASAAAGIREETG QLG RI+FSGQV+NY+NTV QVV +LG+E  AA+YL RCIYS+G+GSN Y
Sbjct:    5 LRKWCLVSVWVLLLGLG---FKVKAEPQVPCYFIFGDSLVDNGNNNRLRSIARADYFPYGIDF-GGPTGRFSNGRTTVDVLTELLGFDNYIPAYSTVSGQEILQGVNYASAAAGIREETGAQLGQRITFSGQVENYKNTVAQVVEILGDEYTAADYLKRCIYSVGMGSNDY 171          
BLAST of FC925600 vs. ExPASy Swiss-Prot
Match: GDL15_ARATH (GDSL esterase/lipase At1g29670 OS=Arabidopsis thaliana GN=At1g29670 PE=2 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 2.941e-63
Identity = 123/171 (71.93%), Postives = 138/171 (80.70%), Query Frame = 2
Query:   68 LRKWWVVMVLLVLINIQNYYYGAKAAPQVPCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFPNGPTGRFSNGKTTVDVIAQLLGFDGYIPPYSAARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHY 580
            L KW VV+VLL           A+A  QVPC+F+FGDSLVDNGNNN L S+AR+NY PYGIDF  GPTGRFSNGKTTVDVIA+LLGF+GYIP Y+   G+ IL GVNYASAAAGIREETGRQLG RISFSGQV+NYQ TV QVV LLG+E +AA+YL RCIYS+GLGSN Y
Sbjct:    5 LTKWCVVLVLLCF---GFSVVKAQAQAQVPCFFVFGDSLVDNGNNNGLISIARSNYFPYGIDF-GGPTGRFSNGKTTVDVIAELLGFNGYIPAYNTVSGRQILSGVNYASAAAGIREETGRQLGQRISFSGQVRNYQTTVSQVVQLLGDETRAADYLKRCIYSVGLGSNDY 171          
BLAST of FC925600 vs. ExPASy Swiss-Prot
Match: GDL17_ARATH (GDSL esterase/lipase At1g33811 OS=Arabidopsis thaliana GN=At1g33811 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 4.558e-48
Identity = 98/172 (56.98%), Postives = 119/172 (69.19%), Query Frame = 2
Query:   68 LRKWWVVMVLLVLINIQNYYYGAKAAPQVPCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFPNGPTGRFSNGKTTVDVIAQLLGFDGYIPPYSAARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLL-GNEDQAANYLSRCIYSIGLGSNHY 580
            LR   ++ + LVL   +      +   QVPC FIFGDSLVDNGNNN+L SLARANY PYGIDFP G TGRF+NG+T VD +AQ+LGF  YIPPYS  RGQ ILRG N+AS AAGIR+ETG  LG   S + QV+ Y   VQQ++    G+ ++   YLSRCI+  G+GSN Y
Sbjct:    4 LRFVLLISLNLVLFGFKTTVSQPQQQAQVPCLFIFGDSLVDNGNNNRLLSLARANYRPYGIDFPQGTTGRFTNGRTYVDALAQILGFRNYIPPYSRIRGQAILRGANFASGAAGIRDETGDNLGAHTSMNQQVELYTTAVQQMLRYFRGDTNELQRYLSRCIFYSGMGSNDY 175          
BLAST of FC925600 vs. ExPASy Swiss-Prot
Match: GDL29_ARATH (GDSL esterase/lipase At1g71691 OS=Arabidopsis thaliana GN=At1g71691 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.920e-38
Identity = 80/143 (55.94%), Postives = 97/143 (67.83%), Query Frame = 2
Query:  152 VPCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFPNGPTGRFSNGKTTVDVIAQLLGFDGYIPPYSAARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHY 580
            VP  F+FGDSL+DNGNNN + S A+ANY PYGIDF  GPTGRF NG T VD IAQLLG    IP YS A G  +LRGVNYASAAAGI  +TG     RI F  Q+ N++ T+ QV +  G     A+ ++R ++ IG+GSN Y
Sbjct:   53 VPALFVFGDSLIDNGNNNNIPSFAKANYFPYGIDFNGGPTGRFCNGLTMVDGIAQLLGLP-LIPAYSEATGDQVLRGVNYASAAAGILPDTGGNFVGRIPFDQQIHNFETTLDQVASKSGGAVAIADSVTRSLFFIGMGSNDY 194          
BLAST of FC925600 vs. ExPASy Swiss-Prot
Match: GDL36_ARATH (GDSL esterase/lipase At2g19050 OS=Arabidopsis thaliana GN=At2g19050 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 3.620e-37
Identity = 75/163 (46.01%), Postives = 103/163 (63.19%), Query Frame = 2
Query:   92 VLLVLINIQNYYYGAKAAPQVPCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFPNGPTGRFSNGKTTVDVIAQLLGFDGYIPPYSAARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHY 580
            +LLV+         A    +VPCYF+FGDS+ DNGNNN L++ A+ NY PYGIDF  GPTGRFSNG+   D+IA+L+ F  YIPP++ A  +    G+NYAS   GIREET + LG+ ISF  Q+KN+++ +                L++C+Y+I +GSN Y
Sbjct:    9 LLLVIATTAFATTEAALGQRVPCYFVFGDSVFDNGNNNVLNTSAKVNYSPYGIDFARGPTGRFSNGRNIPDIIAELMRFSDYIPPFTGASPEQAHIGINYASGGGGIREETSQHLGEIISFKKQIKNHRSMIM-------TAKVPEEKLNKCLYTINIGSNDY 164          
BLAST of FC925600 vs. ExPASy Swiss-Prot
Match: GDL35_ARATH (GDSL esterase/lipase At2g19010 OS=Arabidopsis thaliana GN=At2g19010 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 8.065e-37
Identity = 73/164 (44.51%), Postives = 103/164 (62.80%), Query Frame = 2
Query:   89 MVLLVLINIQNYYYGAKAAPQVPCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFPNGPTGRFSNGKTTVDVIAQLLGFDGYIPPYSAARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHY 580
            +V  ++       YG +A    PC+F+FGDS+ DNGNNN L S A+ N+ PYG DFP GPTGRFSNG+T  D+I +L GF  +IPP++ A  +    G+NYAS  +G+REET   LGDRIS   Q++N++ ++ +        +  A  L +C+Y I +GSN Y
Sbjct:    7 LVAAIIFTAATVVYGQQA----PCFFVFGDSMSDNGNNNNLKSEAKVNFSPYGNDFPKGPTGRFSNGRTIPDIIGELSGFKDFIPPFAEASPEQAHTGMNYASGGSGLREETSEHLGDRISIRKQLQNHKTSITKA-------NVPAERLQQCLYMINIGSNDY 159          
BLAST of FC925600 vs. ExPASy Swiss-Prot
Match: GDL75_ARATH (GDSL esterase/lipase At5g08460 OS=Arabidopsis thaliana GN=At5g08460 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 5.227e-36
Identity = 79/145 (54.48%), Postives = 101/145 (69.66%), Query Frame = 2
Query:  155 PCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFP-NGPTGRFSNGKTTVDVIAQLLGFDGYIPPY--SAARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHY 580
            P  F+FGDSLVDNGNNN L+SLAR+NYLPYGIDF  N PTGRFSNGKT VD I +LLG    IP +  +   G DIL GVNYASAA GI EETGR LG+R S   QV+N++ T+ ++   +  ++    Y+++ +  + LG+N Y
Sbjct:   48 PAMFVFGDSLVDNGNNNHLNSLARSNYLPYGIDFAGNQPTGRFSNGKTIVDFIGELLGLP-EIPAFMDTVDGGVDILHGVNYASAAGGILEETGRHLGERFSMGRQVENFEKTLMEISRSM-RKESVKEYMAKSLVVVSLGNNDY 190          
BLAST of FC925600 vs. ExPASy Swiss-Prot
Match: GDL68_ARATH (GDSL esterase/lipase At4g30140 OS=Arabidopsis thaliana GN=At4g30140 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.521e-35
Identity = 73/144 (50.69%), Postives = 94/144 (65.28%), Query Frame = 2
Query:  149 QVPCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFPNGPTGRFSNGKTTVDVIAQLLGFDGYIPPYSAARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHY 580
            Q PCYF+FGDS+ DNGNNN L++ A+ NYLPYGID+  GPTGRFSNG+   DVIA+L GF+  IPP++ A       G+NYAS A GIREET   +G+RIS   QV N+ + +      L         L +C+Y+I +GSN Y
Sbjct:   30 QTPCYFVFGDSVFDNGNNNALNTKAKVNYLPYGIDYFQGPTGRFSNGRNIPDVIAELAGFNNPIPPFAGASQAQANIGLNYASGAGGIREETSENMGERISLRQQVNNHFSAIITAAVPLSR-------LRQCLYTINIGSNDY 166          
The following BLAST results are available for this feature:
BLAST of FC925600 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
GDL82_ARATH1.276e-6674.70GDSL esterase/lipase At5g45670 OS=Arabidopsis thal... [more]
GDL65_ARATH7.000e-6573.94GDSL esterase/lipase At4g18970 OS=Arabidopsis thal... [more]
GDL14_ARATH2.037e-6470.18GDSL esterase/lipase At1g29660 OS=Arabidopsis thal... [more]
GDL15_ARATH2.941e-6371.93GDSL esterase/lipase At1g29670 OS=Arabidopsis thal... [more]
GDL17_ARATH4.558e-4856.98GDSL esterase/lipase At1g33811 OS=Arabidopsis thal... [more]
GDL29_ARATH1.920e-3855.94GDSL esterase/lipase At1g71691 OS=Arabidopsis thal... [more]
GDL36_ARATH3.620e-3746.01GDSL esterase/lipase At2g19050 OS=Arabidopsis thal... [more]
GDL35_ARATH8.065e-3744.51GDSL esterase/lipase At2g19010 OS=Arabidopsis thal... [more]
GDL75_ARATH5.227e-3654.48GDSL esterase/lipase At5g08460 OS=Arabidopsis thal... [more]
GDL68_ARATH1.521e-3550.69GDSL esterase/lipase At4g30140 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YH08FM1 TF Citrus clementina cDNA clone KN0AAP11YH08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925600 ID=FC925600; Name=FC925600; organism=Citrus clementina; type=EST; length=581bp
TCAATTTTGATCTTTCCTCATCTCATCTGGGTTTTAGAATTTGTTTCCTC
TTTCGGGCTTGATGGATTTAAGAAAATGGTGGGTGGTGATGGTGTTGTTG
GTTTTGATCAATATACAGAATTATTATTATGGGGCTAAAGCAGCGCCTCA
AGTGCCTTGCTACTTCATATTTGGGGATTCATTGGTGGATAACGGGAATA
ATAATCAACTATCTTCATTGGCTAGAGCTAATTATTTGCCTTATGGAATT
GACTTCCCTAATGGTCCTACAGGAAGATTTTCCAATGGCAAAACTACCGT
CGATGTCATTGCCCAACTTCTGGGCTTCGACGGTTACATTCCTCCATATT
CGGCTGCAAGAGGTCAGGATATACTCAGAGGAGTCAATTATGCATCTGCA
GCTGCTGGTATCAGGGAGGAAACTGGTCGACAGCTGGGAGATCGAATCAG
TTTTAGTGGGCAGGTAAAGAATTACCAAAACACGGTTCAGCAAGTAGTGA
ACTTACTAGGAAATGAAGATCAAGCTGCAAATTACCTGAGCCGATGCATA
TACTCAATCGGATTAGGCAGCAACCACTACC
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