FC925617

Overview
NameFC925617
Unique NameFC925617
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length678
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925617 vs. ExPASy Swiss-Prot
Match: KPYC_SOLTU (Pyruvate kinase, cytosolic isozyme OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.086e-23
Identity = 67/157 (42.68%), Postives = 96/157 (61.15%), Query Frame = 2
Query:  182 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSE-KAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATL 649
            TKIV TLGP SR+V ++   L+AGM+VARF+FS G  EYHQETL+NLK A++ T+ LCAVMLDT GPE++    ++ K I LK    + ++ D   +   +++ +++  L   +K G+TI        G+ T +V L      G  V C  +NTATL
Sbjct:   22 TKIVCTLGPSSRTVPMLEKLLRAGMNVARFNFSHGTHEYHQETLDNLKIAMQNTQILCAVMLDTKGPEIRTGFLTDGKPIQLKEGQEITVSTDYTIKGNEEMISMSYKKLVMDLKPGNTILCAD----GTITLTV-LSCDPPSGT-VRCRCENTATL 172          
BLAST of FC925617 vs. ExPASy Swiss-Prot
Match: KPYC_SOYBN (Pyruvate kinase, cytosolic isozyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.874e-23
Identity = 66/157 (42.04%), Postives = 90/157 (57.32%), Query Frame = 2
Query:  182 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQV-VNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATL 649
            TKIV TLGP SRSV++    L+AGM+VARF+FS G  +YHQETL NLK A+  T  LCAVMLDT GPE++    K  K I LK    V +T D   +   +++ +++  L   +K G+TI           T ++ +   +     V C  +NTATL
Sbjct:   23 TKIVCTLGPASRSVEMTEKLLRAGMNVARFNFSHGTHDYHQETLNNLKTAMHNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEVTITTDYDIKGDPEMISMSYKKLPVHLKPGNTI------LCSDGTITLTVLSCDPDAGTVRCRCENTATL 173          
BLAST of FC925617 vs. ExPASy Swiss-Prot
Match: KPYC_TOBAC (Pyruvate kinase, cytosolic isozyme OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.819e-22
Identity = 64/157 (40.76%), Postives = 92/157 (58.60%), Query Frame = 2
Query:  182 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQV-VNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATL 649
            TKIV TLGP SRSV +I   L+AGM+VARF+FS G+ +YHQET++NL+ A+++T  LCAVMLDT GPE++    K  K + LK    + ++ D   +    ++ +++  LA+ VK    I     L    + T   L   +  G D  C  +NTA L
Sbjct:   20 TKIVCTLGPASRSVPMIEKLLRAGMNVARFNFSHGSHDYHQETIDNLRQAMESTGILCAVMLDTKGPEIRTGFLKDAKPVQLKQGQEITISTDYSIKGDESMICMSYKKLAEDVKPQSVI-----LCADGQITFTVLSCDKENGLD-RCRCENTAVL 170          
BLAST of FC925617 vs. ExPASy Swiss-Prot
Match: KPYC_ARATH (Probable pyruvate kinase, cytosolic isozyme OS=Arabidopsis thaliana GN=At4g26390 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 9.926e-22
Identity = 67/157 (42.68%), Postives = 91/157 (57.96%), Query Frame = 2
Query:  182 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQV-VNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATL 649
            TKIV TLGP SRSV ++   L AGMSVARF+FS G+ EYHQETL+NL+ A+  T  LCAVMLDT GPE++    K  K I LK    + ++ D   +   + + +++  LA+ V  G  I        G+ +  V L   + KG  V C  +NT+ L
Sbjct:    9 TKIVCTLGPASRSVPMVEKLLMAGMSVARFNFSHGSYEYHQETLDNLRQAMLNTGMLCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYDLKGDEKTICMSYKKLAQDVNPGMVILCAD----GTISLKV-LSCDKEKGT-VRCRCENTSML 159          
BLAST of FC925617 vs. ExPASy Swiss-Prot
Match: KPYK1_SALTY (Pyruvate kinase I OS=Salmonella typhimurium GN=pykF PE=3 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.342e-18
Identity = 49/157 (31.21%), Postives = 87/157 (55.41%), Query Frame = 2
Query:  182 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVN-KSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATL 649
            TKIV T+GPK+ S +++S  L AGM+V R +FS G+   H + ++NL+  +  T K  A++LDT GPE++ +  +    +SLKA  +   T D      ++++ + ++G    +  G+T+ +   L        + +EV+ ++GN V C + N   L
Sbjct:    4 TKIVCTIGPKTESEEMLSKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKKAAILLDTKGPEIRTIKLEGGNDVSLKAGQTFTFTTDKSVVGNNEIVAVTYEGFTSDLSVGNTVLVDDGL--------IGMEVTAIEGNKVICKVLNNGDL 152          
BLAST of FC925617 vs. ExPASy Swiss-Prot
Match: KPYK1_SALTI (Pyruvate kinase I OS=Salmonella typhi GN=pykF PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.342e-18
Identity = 49/157 (31.21%), Postives = 87/157 (55.41%), Query Frame = 2
Query:  182 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVN-KSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATL 649
            TKIV T+GPK+ S +++S  L AGM+V R +FS G+   H + ++NL+  +  T K  A++LDT GPE++ +  +    +SLKA  +   T D      ++++ + ++G    +  G+T+ +   L        + +EV+ ++GN V C + N   L
Sbjct:    4 TKIVCTIGPKTESEEMLSKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKKAAILLDTKGPEIRTIKLEGGNDVSLKAGQTFTFTTDKSVVGNNEIVAVTYEGFTSDLSVGNTVLVDDGL--------IGMEVTAIEGNKVICKVLNNGDL 152          
BLAST of FC925617 vs. ExPASy Swiss-Prot
Match: KPYK1_ECOLI (Pyruvate kinase I OS=Escherichia coli (strain K12) GN=pykF PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.098e-18
Identity = 49/157 (31.21%), Postives = 87/157 (55.41%), Query Frame = 2
Query:  182 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVN-KSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATL 649
            TKIV T+GPK+ S ++++  L AGM+V R +FS G+   H + ++NL+  +  T K  A++LDT GPE++ +  +    +SLKA  +   T D      S+++ + ++G    +  G+T+ +   L        + +EV+ ++GN V C + N   L
Sbjct:    4 TKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGL--------IGMEVTAIEGNKVICKVLNNGDL 152          
BLAST of FC925617 vs. ExPASy Swiss-Prot
Match: KPYK1_ECO57 (Pyruvate kinase I OS=Escherichia coli O157:H7 GN=pykF PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.098e-18
Identity = 49/157 (31.21%), Postives = 87/157 (55.41%), Query Frame = 2
Query:  182 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVN-KSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATL 649
            TKIV T+GPK+ S ++++  L AGM+V R +FS G+   H + ++NL+  +  T K  A++LDT GPE++ +  +    +SLKA  +   T D      S+++ + ++G    +  G+T+ +   L        + +EV+ ++GN V C + N   L
Sbjct:    4 TKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGL--------IGMEVTAIEGNKVICKVLNNGDL 152          
BLAST of FC925617 vs. ExPASy Swiss-Prot
Match: KPYK_TRYBO (Pyruvate kinase OS=Trypanoplasma borreli GN=PYK PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.658e-18
Identity = 52/158 (32.91%), Postives = 89/158 (56.33%), Query Frame = 2
Query:  185 KIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPD--CGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLA 652
            KI+ T+GP S+SV+V+   +KAG++VAR +FS G  EYHQ+T++N++ A         + LDT GPE++        + ++A  +V+LT D    ++ T++   +++  + K V  G  IF+   L          L V ++ G D+ CV +NT T++
Sbjct:   26 KIICTIGPSSQSVEVLKDLMKAGLNVARMNFSHGTYEYHQKTIDNVRKAASELGIHVGIALDTKGPEIRTGLFPAGDVVIEAHKTVILTTDETFKEKGTAEKFYVDYMNITKVVPVGGHIFVDDGLLD--------LIVVKISGKDIECVAQNTHTIS 175          
BLAST of FC925617 vs. ExPASy Swiss-Prot
Match: KPYK_THELI (Pyruvate kinase (Fragment) OS=Thermococcus litoralis GN=pki PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.483e-17
Identity = 53/156 (33.97%), Postives = 83/156 (53.21%), Query Frame = 2
Query:  182 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATL 649
            TKI+ T+GP S+  + I   +KAGMSVAR +FS G  E H +T+E ++   +  ++  A++ D  G +++V      +++L+    VVLT     E     +P+ F  L K V KGDTI++            + L V EV+ N+V CV+ N   L
Sbjct:   12 TKIIATIGPASKQKESIKKMIKAGMSVARINFSHGTLEEHAKTIETVRDVAEKLERRVAILGDLPGLKMRVGKIKGDSVTLRKGDKVVLTTR-DIEGDETTIPVEFKDLPKLVSKGDTIYLSD--------GYIMLRVEEVRENEVECVVVNGGIL 158          
The following BLAST results are available for this feature:
BLAST of FC925617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
KPYC_SOLTU3.086e-2342.68Pyruvate kinase, cytosolic isozyme OS=Solanum tube... [more]
KPYC_SOYBN6.874e-2342.04Pyruvate kinase, cytosolic isozyme OS=Glycine max ... [more]
KPYC_TOBAC5.819e-2240.76Pyruvate kinase, cytosolic isozyme OS=Nicotiana ta... [more]
KPYC_ARATH9.926e-2242.68Probable pyruvate kinase, cytosolic isozyme OS=Ara... [more]
KPYK1_SALTY1.342e-1831.21Pyruvate kinase I OS=Salmonella typhimurium GN=pyk... [more]
KPYK1_SALTI1.342e-1831.21Pyruvate kinase I OS=Salmonella typhi GN=pykF PE=3... [more]
KPYK1_ECOLI5.098e-1831.21Pyruvate kinase I OS=Escherichia coli (strain K12)... [more]
KPYK1_ECO575.098e-1831.21Pyruvate kinase I OS=Escherichia coli O157:H7 GN=p... [more]
KPYK_TRYBO6.658e-1832.91Pyruvate kinase OS=Trypanoplasma borreli GN=PYK PE... [more]
KPYK_THELI1.483e-1733.97Pyruvate kinase (Fragment) OS=Thermococcus litoral... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YM17FM1 TF Citrus clementina cDNA clone KN0AAP8YM17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925617 ID=FC925617; Name=FC925617; organism=Citrus clementina; type=EST; length=678bp
TAAAATTCAAAACATTCTAATCAACGCTAACCGCTGCCTCTTTCATCTCT
CGTACTCTCTCTGTATCTCTCTGTATCTCTCTGTTCAGTGAAAGATGCAT
TCAAGTCACTTGCTTCTCGAGGAGCCAATCAGGATGGCTTCAATCCTGGA
GCCATCCAAAGCCAGTTTCTTCCCGGCAATGACCAAAATTGTCGGAACGC
TTGGTCCTAAATCTCGATCTGTTGATGTTATATCCGGTTGCCTCAAAGCT
GGAATGTCTGTGGCTAGATTCGATTTCTCGTGGGGTAATACTGAATACCA
CCAAGAGACCTTGGAGAATCTCAAGGCGGCAGTTAAGACTACTAAGAAGC
TTTGTGCTGTTATGTTGGACACAGTGGGTCCCGAATTGCAGGTTGTTAAT
AAGAGTGAGAAGGCAATTTCACTTAAGGCAGATGGTTCTGTTGTTCTCAC
ACCTGACTGTGGACAAGAAGCCACTTCTCAAGTTTTGCCCATCAATTTCG
ATGGACTTGCTAAGTCAGTGAAGAAAGGAGACACCATTTTTATCGGTCAA
TACTTGTTCACTGGAAGTGAGACTACTTCTGTGTGGCTGGAGGTTTCTGA
AGTGAAAGGAAATGATGTAACTTGTGTGATAAAGAATACTGCAACGTTGG
CTGGTTCACTTTTCACTTTACATGCCTC
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