FC925646

Overview
NameFC925646
Unique NameFC925646
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length824
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925646 vs. ExPASy Swiss-Prot
Match: B3GT7_ARATH (Beta-1,3-galactosyltransferase 7 OS=Arabidopsis thaliana GN=B3GALT7 PE=2 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 8.912e-77
Identity = 151/241 (62.66%), Postives = 184/241 (76.35%), Query Frame = 2
Query:   89 KWIPFLCLFCFALGILFSNLTWNPPESDGHPSLNVRRREQQVAVASTDCA--KKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKPIGQLQMELAASRSSREM-PGLEXXXXXXXXXXRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGGKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVPVNLGMLATT 802
            KW+PFLC+  FALG +F++ +W P    G   ++   R+ ++ + S DCA  KKA Q++DV  EVL+T  AI D     DR+LDK +  L    +++RSS+EM  G E           R KVF+V+GINTAFSSRKRRDSVR+TWMPQG KL +LE+EKGI+I+FMIGHSATSNSILD+AIDSEDAQHKDFLRLEH+EGYHELSAKTKIFFSTAVAKWDA+FY+KVDDDV VNLGMLA+T
Sbjct:   13 KWVPFLCISFFALGAIFTSRSWEPSSDSGSQLISQHHRDHELQIVSDDCAHNKKATQEKDVTGEVLRTHEAIQD-----DRSLDKSVSTL----SSTRSSQEMVDGSETNP--------RKKVFMVMGINTAFSSRKRRDSVRETWMPQGEKLERLEQEKGIVIKFMIGHSATSNSILDRAIDSEDAQHKDFLRLEHVEGYHELSAKTKIFFSTAVAKWDAEFYIKVDDDVHVNLGMLAST 236          
BLAST of FC925646 vs. ExPASy Swiss-Prot
Match: B3GT5_ARATH (Probable beta-1,3-galactosyltransferase 5 OS=Arabidopsis thaliana GN=B3GALT5 PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.689e-65
Identity = 128/239 (53.56%), Postives = 169/239 (70.71%), Query Frame = 2
Query:   92 WIPFLCLFCFALGILFSNLTWNPPESDGHPSLNVRRREQQVAVASTDCA--KKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKPIGQLQMELAASRSSREMPGLEXXXXXXXXXXRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGGKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVPVNLGMLATT 802
            W+P LC+ CF LG +F++   +     G   +   RR+Q++ + + D A  KK  QD DV +EVLKT  AI         +LDK +  LQ +L+A+ S +++  +           +  KVF+VIGINTAFSSRKRRDS+R+TWMPQG KL +LE+EKGI+++FMIGHS+T NS+LDK IDSEDAQ+ DF RL+H+EGY+ LSAKTK FFS+AVAKWDA+FYVK+DDDV VNLG LA+T
Sbjct:   15 WVPLLCISCFFLGAIFTSKLRSASSDSGSQLILQHRRDQELKIVTQDYAHEKKKSQDNDVMEEVLKTHKAIE--------SLDKSVSMLQKQLSATHSPQQIVNVSATNSSTEGNQKN-KVFMVIGINTAFSSRKRRDSLRETWMPQGEKLEKLEKEKGIVVKFMIGHSSTPNSMLDKEIDSEDAQYNDFFRLDHVEGYYNLSAKTKSFFSSAVAKWDAEFYVKIDDDVHVNLGTLAST 244          
BLAST of FC925646 vs. ExPASy Swiss-Prot
Match: B3GT2_ARATH (Probable beta-1,3-galactosyltransferase 2 OS=Arabidopsis thaliana GN=B3GALT2 PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.064e-57
Identity = 125/245 (51.02%), Postives = 158/245 (64.49%), Query Frame = 2
Query:   89 KWIPFLCLFCFALGILFSNLTWNPPESDG--HPSLNVRRREQQVAVASTDCAKKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKPIGQLQMELAASRSSREM-----PGLEXXXXXXXXXXRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGGKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVPVNLGMLATT 802
            KW   LCL  F +G+ F+N  WN PES G  HPS+    R   + + S  C  KA   ++V ++     G + +  +   +TLDK I  L+MELAA+RS +E      P  +          RR    +V+GINTAFSSRKRRDS+R TWMPQG K  +LE EKGIIIRF+IGHSAT+  ILD+AI++ED +H DFLRL+H+EGY ELS KTK +FSTA + WDADFYVKVDDDV VN+  L  T
Sbjct:   18 KWTILLCLGSFCVGMFFTNRMWNIPESKGMSHPSVTEAER---LKLVSEGCNPKALYQKEVKRDPQALFGEVANTHIAL-QTLDKTISSLEMELAAARSVQESLQNGAPLSDDMGKKQPQEQRR--FLMVVGINTAFSSRKRRDSIRATWMPQGEKRKRLEEEKGIIIRFVIGHSATTGGILDRAIEAEDRKHGDFLRLDHVEGYLELSGKTKTYFSTAFSMWDADFYVKVDDDVHVNIATLGET 256          
BLAST of FC925646 vs. ExPASy Swiss-Prot
Match: B3GT3_ARATH (Probable beta-1,3-galactosyltransferase 3 OS=Arabidopsis thaliana GN=B3GALT3 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.282e-56
Identity = 123/248 (49.60%), Postives = 156/248 (62.90%), Query Frame = 2
Query:   89 KWIPFLCLFCFALGILFSNLTWNPPESDGHPSLNVRRREQQVAVASTDCAKKAFQDQDVAK-------EVLKTRGAIHDGSVESDRTLDKPIGQLQMELAASRSSREMPGLEXXXXXXXXXXRRP---KVFVVIGINTAFSSRKRRDSVRDTWMPQGGKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVPVNLGMLATT 802
            KW   LC   F  GILF++  W  PES   P  +V    +++ + S  C  K    ++V +       EV KT  AI        +TLDK I  L+MELAA+RS++E               + P   +  +V+GINTAFSSRKRRDSVR TWMP G K  +LE EKGIIIRF+IGHSAT+  ILD++I++ED +H DFLRL+H+EGY ELS KTK +FSTAV+KWDA+FYVKVDDDV VN+  L  T
Sbjct:   19 KWTFLLCFGSFCFGILFTDRMWIIPESKDMPRPSVSTEAERLKLISEGCDPKTLYQKEVNRDPQALFGEVSKTHNAI--------QTLDKTISSLEMELAAARSAQESLVNGAPISNDMEKKQLPGKRRYLMVVGINTAFSSRKRRDSVRTTWMPSGEKRKKLEEEKGIIIRFVIGHSATAGGILDRSIEAEDKKHGDFLRLDHVEGYLELSGKTKTYFSTAVSKWDAEFYVKVDDDVHVNIATLGET 258          
BLAST of FC925646 vs. ExPASy Swiss-Prot
Match: B3GT8_ARATH (Probable beta-1,3-galactosyltransferase 8 OS=Arabidopsis thaliana GN=B3GALT8 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 8.117e-54
Identity = 118/243 (48.56%), Postives = 156/243 (64.20%), Query Frame = 2
Query:   89 KWIPFLCLFCFALGILFSNLTWNP---PESDGHPSLNVRRREQQVAVASTDCAKKAFQDQ--DVAKEVLKTRGAIHDGSVESDRTLDKPIGQLQMELAASRSSREMPGLEXXXXXXXXXXRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGGKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVPVNLGMLATT 802
            K I  LCL  F  G LF + T +    PE + H       +  ++     +  +K  + +  D+  EV +T  A+        ++L++ +  L+MELAA+R+S                 R  KVF VIGINTAFSS+KRRDSVR TWMP G KL ++E+EKGI++RF+IGHSAT   +LDKAID ED++HKDFLRL+HIEGYH+LS KT+++FSTA A +DA+FYVKVDDDV VNLGML TT
Sbjct:    9 KAIIVLCLASFLAGSLFMSRTLSRSYIPEEEDHHLTKHLSKHLEIQKDCDEHKRKLIESKSRDIIGEVSRTHQAV--------KSLERTMSTLEMELAAARTSDRSSEF-WSERSAKNQSRLQKVFAVIGINTAFSSKKRRDSVRQTWMPTGEKLKKIEKEKGIVVRFVIGHSATPGGVLDKAIDEEDSEHKDFLRLKHIEGYHQLSTKTRLYFSTATAMYDAEFYVKVDDDVHVNLGMLVTT 242          
BLAST of FC925646 vs. ExPASy Swiss-Prot
Match: B3GT6_ARATH (Probable beta-1,3-galactosyltransferase 6 OS=Arabidopsis thaliana GN=B3GALT6 PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.454e-52
Identity = 115/245 (46.94%), Postives = 156/245 (63.67%), Query Frame = 2
Query:   89 KWIPFLCLFCFALGILFSNLTWNPPES-DGHPSLNVRRREQQVAVAS-TDCAKKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKPIGQLQMELAASRSSRE-----MPGLEXXXXXXXXXXRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGGKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVPVNLGMLATT 802
            +W+  LC+  F LG+L  N      E+ DG    +  + +Q  ++    DC  K   + D+   V  T   I        +TLDK I  L++ELA +R++R       P +            RP++F V+GI TAFSSRKRRDS+R TW+P+G +L +LE EKGII+RF+IGHS++   +LD  I++E+ QHKDF RL HIEGYHELS+KT+I+FS+AVAKWDADFY+KVDDDV VNLGML +T
Sbjct:   17 RWVFVLCISSFLLGVLVVNRLLASFETVDGIERASPEQNDQSRSLNPLVDCESK---EGDILSRVSHTHDVI--------KTLDKTISSLEVELATARAARSDGRDGSPAVAKTVADQSKI--RPRMFFVMGIMTAFSSRKRRDSIRGTWLPKGDELKRLETEKGIIMRFVIGHSSSPGGVLDHTIEAEEEQHKDFFRLNHIEGYHELSSKTQIYFSSAVAKWDADFYIKVDDDVHVNLGMLGST 248          
BLAST of FC925646 vs. ExPASy Swiss-Prot
Match: B3GT4_ARATH (Probable beta-1,3-galactosyltransferase 4 OS=Arabidopsis thaliana GN=B3GALT4 PE=1 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.454e-52
Identity = 117/242 (48.35%), Postives = 159/242 (65.70%), Query Frame = 2
Query:   89 KWIPFLCLFCFALGILFSNLTWNPPESDGHPSLNVRRREQQVAVASTDC--AKKAF--QDQDVAKEVLKTRGAIHDGSVESDRTLDKPIGQLQMELAASRSSRE--MPGLEXXXXXXXXXX-RRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGGKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVPVNLGML 793
            KW  FLC+  F  GILFS+  W  PES+   S +    ++++ + S DC  +KK    + +D+  +V K+  AI        +TLDK I +L+ ELA +R+++E  M G              + K  +V+G+NTAFSSRKRRDSVR TWMP G +  +LE EKGI++RF+IGHS+T   ILD+AI +E+++H DFLRL+H+EGY ELSAKTK +F+TA A WDADFYVKVDDDV VN+  L
Sbjct:   22 KWTLFLCIGFFCAGILFSDRMWPEPESNV-VSRDTVASDERLRLESEDCDSSKKGLKRESKDILGDVYKSPDAI--------QTLDKTISKLETELADARAAQESIMNGSPVSDDFKLPETVTKRKYLMVVGVNTAFSSRKRRDSVRATWMPPGEERKKLEEEKGIVMRFVIGHSSTPGGILDRAIQAEESKHGDFLRLDHVEGYLELSAKTKTYFTTAFAMWDADFYVKVDDDVHVNIATL 254          
BLAST of FC925646 vs. ExPASy Swiss-Prot
Match: B3GT1_ARATH (Probable beta-1,3-galactosyltransferase 1 OS=Arabidopsis thaliana GN=B3GALT1 PE=2 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 5.817e-52
Identity = 118/232 (50.86%), Postives = 149/232 (64.22%), Query Frame = 2
Query:  101 FLCLFCFALGILFSNLTWN-PPESDGHPSLNVRRREQQVAVASTDCAKKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKPIGQLQMELAASRSSREMPGLEXXXXXXXXXXRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGGKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVPVNLGML 793
            F+CL  F LG+ F+N  WN  PE+ G   L+      +++++S+DC KK                 + D    +   LDK I  L+M+L A+R+ RE   L           +R K F+VIGINTAFSSRKRRDSVR TWMPQG  L +LE EKGII+RF+IGHS  S+ ILDKAI++E+  H DFLRLEH EGY +LSAKTK FF+TAV+ WDA+FY+KVDDDV VNL  L
Sbjct:   24 FMCLASFCLGMFFTNRMWNIVPEARGISRLS------KLSLSSSDCDKKN----------------VLDYGNNTIGILDKSISNLEMKLVAARAERE--SLSGKFNISNEAKKR-KYFMVIGINTAFSSRKRRDSVRSTWMPQGENLKKLEEEKGIIVRFVIGHSVLSHGILDKAIEAEEKTHGDFLRLEHTEGYMKLSAKTKTFFATAVSLWDAEFYIKVDDDVHVNLASL 230          
BLAST of FC925646 vs. ExPASy Swiss-Prot
Match: B3GTB_ARATH (Probable beta-1,3-galactosyltransferase 11 OS=Arabidopsis thaliana GN=B3GALT11 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.721e-25
Identity = 64/161 (39.75%), Postives = 94/161 (58.39%), Query Frame = 2
Query:  323 RTLDKPIGQLQMELAASRSSREMPGLEXXXXXXXXXXRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGGKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEH-IEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVPVNLGMLATT 802
            R   K +  L+MEL+   S+R+   +            + +  VVIGI T+  ++K+RD+VR  WM  G  L +LE EKG+I RF+IG SA     +DK+ID+E++Q  DF+ L+  +E   E S K K+FF+ A  +WDA FY K  D++ VN+  L TT
Sbjct:   72 REQKKTLAALEMELS---SARQEGFVSKSPKLADGTETKKRPLVVIGIMTSLGNKKKRDAVRQAWMGTGASLKKLESEKGVIARFVIGRSANKGDSMDKSIDTENSQTDDFIILDDVVEAPEEASKKVKLFFAYAADRWDAQFYAKAIDNIYVNIDALGTT 229          
BLAST of FC925646 vs. ExPASy Swiss-Prot
Match: B3GT9_ARATH (Probable beta-1,3-galactosyltransferase 9 OS=Arabidopsis thaliana GN=B3GALT9 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.350e-24
Identity = 64/155 (41.29%), Postives = 93/155 (60.00%), Query Frame = 2
Query:  323 RTLDKPIGQLQMELAASRSSREMPGLEXXXXXXXXXXRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGGKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLE-HIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVPVNL 784
            + L++ I + +MEL  ++S   +  L+             K+  VIG+ + F S  RR++ R ++MPQG  L +LE E+GI+IRF+IG S      LD+ ID E+   KDFL LE H E   EL+ K K FFS AV  WDA+FY+KVDD++ ++L
Sbjct:   84 KDLERRIVETEMELTLAKSQGYLKNLKSGSSSGK------KLLAVIGVYSGFGSHLRRNTFRGSYMPQGDALRKLE-ERGIVIRFVIGRSPNRGDSLDRKIDEENQARKDFLILENHEEAQEELAKKVKFFFSAAVQNWDAEFYIKVDDNIDLDL 231          
The following BLAST results are available for this feature:
BLAST of FC925646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
B3GT7_ARATH8.912e-7762.66Beta-1,3-galactosyltransferase 7 OS=Arabidopsis th... [more]
B3GT5_ARATH2.689e-6553.56Probable beta-1,3-galactosyltransferase 5 OS=Arabi... [more]
B3GT2_ARATH2.064e-5751.02Probable beta-1,3-galactosyltransferase 2 OS=Arabi... [more]
B3GT3_ARATH2.282e-5649.60Probable beta-1,3-galactosyltransferase 3 OS=Arabi... [more]
B3GT8_ARATH8.117e-5448.56Probable beta-1,3-galactosyltransferase 8 OS=Arabi... [more]
B3GT6_ARATH4.454e-5246.94Probable beta-1,3-galactosyltransferase 6 OS=Arabi... [more]
B3GT4_ARATH4.454e-5248.35Probable beta-1,3-galactosyltransferase 4 OS=Arabi... [more]
B3GT1_ARATH5.817e-5250.86Probable beta-1,3-galactosyltransferase 1 OS=Arabi... [more]
B3GTB_ARATH2.721e-2539.75Probable beta-1,3-galactosyltransferase 11 OS=Arab... [more]
B3GT9_ARATH1.350e-2441.29Probable beta-1,3-galactosyltransferase 9 OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YL23FM1 TF Citrus clementina cDNA clone KN0AAP3YL23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925646 ID=FC925646; Name=FC925646; organism=Citrus clementina; type=EST; length=824bp
CTCTTTTCTTGTTTGCTCCGAGAGAAAAAGGAAAAGAAAAAGAAAGAAAA
TGAAGTATCGAACGAGTACTACTACTATTATCTCCACAAAATGGATTCCT
TTTTTATGCTTATTTTGCTTTGCTCTCGGGATTCTCTTCAGCAACTTGAC
GTGGAACCCACCGGAATCGGATGGACATCCATCGTTAAACGTGCGCAGAC
GTGAGCAGCAAGTGGCAGTTGCTTCAACTGATTGCGCTAAAAAAGCTTTT
CAAGATCAAGATGTGGCGAAGGAAGTTTTGAAAACCCGTGGAGCAATTCA
TGATGGTTCTGTTGAATCGGATAGGACTTTGGACAAGCCGATTGGGCAGC
TTCAGATGGAGCTGGCTGCTTCCCGGAGTAGTCGGGAAATGCCTGGCTTG
GAAAGTTCTGCTGCCAATGCAAGTACGAACTCCAGAAGGCCAAAAGTTTT
CGTGGTTATTGGAATTAATACTGCTTTTAGTAGTAGGAAGCGACGTGATT
CTGTTAGGGACACTTGGATGCCTCAAGGGGGAAAACTTATTCAATTAGAA
CGTGAGAAGGGAATAATCATCCGATTCATGATTGGCCACAGTGCGACATC
CAACAGCATTTTAGATAAAGCTATTGATTCAGAAGATGCACAGCACAAGG
ACTTCCTACGGCTGGAGCACATTGAAGGATATCATGAATTGTCTGCAAAA
ACAAAGATTTTCTTTTCCACTGCTGTTGCAAAATGGGATGCTGATTTCTA
TGTTAAGGTGGATGACGATGTCCCTGTAAATCTTGGTATGCTAGCAACTA
CCTCCTTCCCGTCACCGTTCAAAG
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