FC925657

Overview
NameFC925657
Unique NameFC925657
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length767
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925657 vs. ExPASy Swiss-Prot
Match: GH31_ARATH (Probable indole-3-acetic acid-amido synthetase GH3.1 OS=Arabidopsis thaliana GN=GH3.1 PE=2 SV=1)

HSP 1 Score: 402.134 bits (1032), Expect = 1.693e-111
Identity = 198/229 (86.46%), Postives = 215/229 (93.89%), Query Frame = 2
Query:   80 MAVDSALSSPLGPPACEKDAKALRFIEEMTRNAEAVQEKVLAEILSRNADVEYLKRYKLGGATDRETFKSKLPIIKYEDLQPEIQRIANGDRSAILSAHPISEFLTSSGTSAGERKLMPTIQEELDRRQLLYSLLMPVMNLYVPGLDKGKALYFLFVKSETRTPGGLLARPVLTSYYKSEHFKTRPYDPYNVYTSPNEAILCADSFQSMYAQMLCGLLEREQVLRLGAV 766
            MAVDS LSSPLGPPACEKDAKALRFIEEMTRNA+ VQE +LAEIL+RNAD EYL+R+ L GATDR+TFK+K+P+I YEDLQPEIQRIA+GDRS ILSAHPISEFLTSSGTSAGERKLMPTI+EELDRRQLLYSLLMPVMNLYVPGLDKGK +YFLFVKSET+TPGGL ARPVLTSYYKSEHF++RPYDPYNVYTSPNEAILC DSFQSMY QMLCGLL+R  VLR+GAV
Sbjct:    1 MAVDSNLSSPLGPPACEKDAKALRFIEEMTRNADTVQENLLAEILARNADTEYLRRFNLCGATDRDTFKTKIPVITYEDLQPEIQRIADGDRSPILSAHPISEFLTSSGTSAGERKLMPTIKEELDRRQLLYSLLMPVMNLYVPGLDKGKGMYFLFVKSETKTPGGLPARPVLTSYYKSEHFRSRPYDPYNVYTSPNEAILCPDSFQSMYTQMLCGLLDRLSVLRVGAV 229          
BLAST of FC925657 vs. ExPASy Swiss-Prot
Match: GH32_ARATH (Indole-3-acetic acid-amido synthetase GH3.2 OS=Arabidopsis thaliana GN=GH3.2 PE=1 SV=2)

HSP 1 Score: 359.762 bits (922), Expect = 9.634e-99
Identity = 180/230 (78.26%), Postives = 203/230 (88.26%), Query Frame = 2
Query:   80 MAVDSALSSPL-GPPACEKDAKALRFIEEMTRNAEAVQEKVLAEILSRNADVEYLKRYKLGGATDRETFKSKLPIIKYEDLQPEIQRIANGDRSAILSAHPISEFLTSSGTSAGERKLMPTIQEELDRRQLLYSLLMPVMNLYVPGLDKGKALYFLFVKSETRTPGGLLARPVLTSYYKSEHFKTRPYDPYNVYTSPNEAILCADSFQSMYAQMLCGLLEREQVLRLGAV 766
            MAVDS L S +      EKD KAL+FIEEMTRN ++VQEKVL EIL+RN++ EYLKR+ L G  DR+TFKSK+P++ YEDL+PEIQRI+NGD S ILS+HPI+EFLTSSGTSAGERKLMPTI+E+LDRRQLLYSLLMPVMNLYVPGLDKGK LYFLFVKSE++T GGL ARPVLTSYYKS+HFK RPYDPYNVYTSPNEAILC+DS QSMYAQMLCGLL R +VLRLGAV
Sbjct:    1 MAVDSPLQSRMVSATTSEKDVKALKFIEEMTRNPDSVQEKVLGEILTRNSNTEYLKRFDLDGVVDRKTFKSKVPVVTYEDLKPEIQRISNGDCSPILSSHPITEFLTSSGTSAGERKLMPTIEEDLDRRQLLYSLLMPVMNLYVPGLDKGKGLYFLFVKSESKTSGGLPARPVLTSYYKSDHFKRRPYDPYNVYTSPNEAILCSDSSQSMYAQMLCGLLMRHEVLRLGAV 230          
BLAST of FC925657 vs. ExPASy Swiss-Prot
Match: GH33_ARATH (Indole-3-acetic acid-amido synthetase GH3.3 OS=Arabidopsis thaliana GN=GH3.3 PE=1 SV=1)

HSP 1 Score: 357.836 bits (917), Expect = 3.661e-98
Identity = 179/229 (78.17%), Postives = 201/229 (87.77%), Query Frame = 2
Query:   80 MAVDSALSSPLGPPACEKDAKALRFIEEMTRNAEAVQEKVLAEILSRNADVEYLKRYKLGGATDRETFKSKLPIIKYEDLQPEIQRIANGDRSAILSAHPISEFLTSSGTSAGERKLMPTIQEELDRRQLLYSLLMPVMNLYVPGLDKGKALYFLFVKSETRTPGGLLARPVLTSYYKSEHFKTRPYDPYNVYTSPNEAILCADSFQSMYAQMLCGLLEREQVLRLGAV 766
            M VDSAL SP+      KD KALRFIEEMTRN + VQ+KV+ EILSRN+D EYLKR+ L G TDR+TFK+K+P++ Y+DL+PEIQRIANGDRS ILS++PI+EFLTSSGTSAGERKLMPTI E++DRRQLLYSLLMPVMNLYVPGLDKGKALYFLFVK+E++TPGGL ARPVLTSYYKSE FK RP DPYNVYTSPNEAILC DS QSMY QMLCGLL R +VLRLGAV
Sbjct:    1 MTVDSALRSPMMHSPSTKDVKALRFIEEMTRNVDFVQKKVIREILSRNSDTEYLKRFGLKGFTDRKTFKTKVPVVIYDDLKPEIQRIANGDRSMILSSYPITEFLTSSGTSAGERKLMPTIDEDMDRRQLLYSLLMPVMNLYVPGLDKGKALYFLFVKTESKTPGGLPARPVLTSYYKSEQFKRRPNDPYNVYTSPNEAILCPDSSQSMYTQMLCGLLMRHEVLRLGAV 229          
BLAST of FC925657 vs. ExPASy Swiss-Prot
Match: GH32_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.2 OS=Oryza sativa subsp. japonica GN=GH3.2 PE=2 SV=1)

HSP 1 Score: 343.584 bits (880), Expect = 7.145e-94
Identity = 164/215 (76.28%), Postives = 193/215 (89.77%), Query Frame = 2
Query:  122 ACEKDAKALRFIEEMTRNAEAVQEKVLAEILSRNADVEYLKRYKLGGATDRETFKSKLPIIKYEDLQPEIQRIANGDRSAILSAHPISEFLTSSGTSAGERKLMPTIQEELDRRQLLYSLLMPVMNLYVPGLDKGKALYFLFVKSETRTPGGLLARPVLTSYYKSEHFKTRPYDPYNVYTSPNEAILCADSFQSMYAQMLCGLLEREQVLRLGAV 766
            ACE+DA+ L FIEEMTR  +AVQE+VLA IL+RN   EYL+R+ + G TDRE FK+++P++ YEDL+PEI+RIANGDRS I+S+HPI+EFLTSSGTSAGERKLMPTI++ELDRRQ+LYSLLMPVMNLYVPGLDKGK LYFLF+KSET+TPGGL ARPVLTSYYKS+HFK RP+DPYNVYTSP  AILC D+FQSMYAQMLCGL+ R +VLR+GAV
Sbjct:   25 ACERDAEKLEFIEEMTRGFDAVQERVLAAILARNNGAEYLRRHGMEGRTDREAFKARVPVVTYEDLRPEIERIANGDRSNIISSHPITEFLTSSGTSAGERKLMPTIEDELDRRQMLYSLLMPVMNLYVPGLDKGKGLYFLFIKSETKTPGGLPARPVLTSYYKSDHFKHRPFDPYNVYTSPTAAILCTDAFQSMYAQMLCGLVARAEVLRVGAV 239          
BLAST of FC925657 vs. ExPASy Swiss-Prot
Match: GH38_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.8 OS=Oryza sativa subsp. japonica GN=GH3.8 PE=2 SV=1)

HSP 1 Score: 341.273 bits (874), Expect = 3.546e-93
Identity = 168/225 (74.67%), Postives = 189/225 (84.00%), Query Frame = 2
Query:   92 SALSSPLGPPACEKDAKALRFIEEMTRNAEAVQEKVLAEILSRNADVEYLKRYKLGGATDRETFKSKLPIIKYEDLQPEIQRIANGDRSAILSAHPISEFLTSSGTSAGERKLMPTIQEELDRRQLLYSLLMPVMNLYVPGLDKGKALYFLFVKSETRTPGGLLARPVLTSYYKSEHFKTRPYDPYNVYTSPNEAILCADSFQSMYAQMLCGLLEREQVLRLGAV 766
            +AL +P      E D + LRFI+EMT N +AVQE+VL EIL RNA  EYL +  L GATDR  F++K+P++ Y+DLQP IQRIANGDRS ILS HP+SEFLTSSGTSAGERKLMPTI +ELDRRQLLYSLLMPVMNLYVPGLDKGK LYFLFVKSET+TPGGL ARPVLTSYYKS+HFK RPYDPY+ YTSP  AILCAD+FQSMYAQM+CGL +R  VLRLGAV
Sbjct:   12 TALRTPAAGAVKEGDVEKLRFIDEMTTNVDAVQERVLGEILGRNAGTEYLTKCGLDGATDRAAFRAKVPVVSYDDLQPYIQRIANGDRSPILSTHPVSEFLTSSGTSAGERKLMPTIMDELDRRQLLYSLLMPVMNLYVPGLDKGKGLYFLFVKSETKTPGGLTARPVLTSYYKSDHFKNRPYDPYHNYTSPTAAILCADAFQSMYAQMVCGLCQRNDVLRLGAV 236          
BLAST of FC925657 vs. ExPASy Swiss-Prot
Match: GH38_ORYSI (Probable indole-3-acetic acid-amido synthetase GH3.8 OS=Oryza sativa subsp. indica GN=GH3.8 PE=2 SV=2)

HSP 1 Score: 341.273 bits (874), Expect = 3.546e-93
Identity = 168/225 (74.67%), Postives = 189/225 (84.00%), Query Frame = 2
Query:   92 SALSSPLGPPACEKDAKALRFIEEMTRNAEAVQEKVLAEILSRNADVEYLKRYKLGGATDRETFKSKLPIIKYEDLQPEIQRIANGDRSAILSAHPISEFLTSSGTSAGERKLMPTIQEELDRRQLLYSLLMPVMNLYVPGLDKGKALYFLFVKSETRTPGGLLARPVLTSYYKSEHFKTRPYDPYNVYTSPNEAILCADSFQSMYAQMLCGLLEREQVLRLGAV 766
            +AL +P      E D + LRFI+EMT N +AVQE+VL EIL RNA  EYL +  L GATDR  F++K+P++ Y+DLQP IQRIANGDRS ILS HP+SEFLTSSGTSAGERKLMPTI +ELDRRQLLYSLLMPVMNLYVPGLDKGK LYFLFVKSET+TPGGL ARPVLTSYYKS+HFK RPYDPY+ YTSP  AILCAD+FQSMYAQM+CGL +R  VLRLGAV
Sbjct:   12 TALRTPAAGAVKEGDVEKLRFIDEMTTNVDAVQERVLGEILGRNAGTEYLTKCGLDGATDRAAFRAKVPVVSYDDLQPYIQRIANGDRSPILSTHPVSEFLTSSGTSAGERKLMPTIMDELDRRQLLYSLLMPVMNLYVPGLDKGKGLYFLFVKSETKTPGGLTARPVLTSYYKSDHFKNRPYDPYHNYTSPTAAILCADAFQSMYAQMVCGLCQRNDVLRLGAV 236          
BLAST of FC925657 vs. ExPASy Swiss-Prot
Match: GH36_ARATH (Indole-3-acetic acid-amido synthetase GH3.6 OS=Arabidopsis thaliana GN=GH3.6 PE=1 SV=1)

HSP 1 Score: 324.324 bits (830), Expect = 4.486e-88
Identity = 155/213 (72.77%), Postives = 185/213 (86.85%), Query Frame = 2
Query:  128 EKDAKALRFIEEMTRNAEAVQEKVLAEILSRNADVEYLKRYKLGGATDRETFKSKLPIIKYEDLQPEIQRIANGDRSAILSAHPISEFLTSSGTSAGERKLMPTIQEELDRRQLLYSLLMPVMNLYVPGLDKGKALYFLFVKSETRTPGGLLARPVLTSYYKSEHFKTRPYDPYNVYTSPNEAILCADSFQSMYAQMLCGLLEREQVLRLGAV 766
            EK+   L+FIE++T NA+ VQ +VL EILSRNADVEYLKR+ L G TDRETFK  +P++ YED+QPEI RIANGD+S +L ++PISEFLTSSGTS GERKLMPTI+EELDRR LLYSLLMPVM+ +VPGLDKGK +YFLF+KSE++TPGGL ARPVLTSYYKS HFK RPYDPY  YTSPN+ ILC+DS+QSMY+QMLCGL + ++VLR+GAV
Sbjct:   19 EKNKNKLQFIEDVTTNADDVQRRVLEEILSRNADVEYLKRHGLEGRTDRETFKHIMPVVTYEDIQPEINRIANGDKSQVLCSNPISEFLTSSGTSGGERKLMPTIEEELDRRSLLYSLLMPVMDQFVPGLDKGKGMYFLFIKSESKTPGGLPARPVLTSYYKSSHFKNRPYDPYTNYTSPNQTILCSDSYQSMYSQMLCGLCQHKEVLRVGAV 231          
BLAST of FC925657 vs. ExPASy Swiss-Prot
Match: GH35_ARATH (Indole-3-acetic acid-amido synthetase GH3.5 OS=Arabidopsis thaliana GN=GH3.5 PE=1 SV=1)

HSP 1 Score: 320.857 bits (821), Expect = 4.959e-87
Identity = 153/213 (71.83%), Postives = 185/213 (86.85%), Query Frame = 2
Query:  128 EKDAKALRFIEEMTRNAEAVQEKVLAEILSRNADVEYLKRYKLGGATDRETFKSKLPIIKYEDLQPEIQRIANGDRSAILSAHPISEFLTSSGTSAGERKLMPTIQEELDRRQLLYSLLMPVMNLYVPGLDKGKALYFLFVKSETRTPGGLLARPVLTSYYKSEHFKTRPYDPYNVYTSPNEAILCADSFQSMYAQMLCGLLEREQVLRLGAV 766
            +K+ + L+ IEE+T NA+ VQ +VL EIL+RNADVEYL+R+ L G TDRETFK+ +P+I YED++PEI RIANGD+S ILS+ PISEFLTSSGTS GERKLMPTI+EELDRR LLYSLLMPVM+ +VPGL+ GK +YFLF+KSE++TPGGL ARPVLTSYYKS HFK RPYDPY  YTSPNE ILC+DS+QSMY+QMLCGL + ++VLR+GAV
Sbjct:   19 QKNKQKLQLIEELTSNADQVQRQVLEEILTRNADVEYLRRHDLNGRTDRETFKNIMPVITYEDIEPEINRIANGDKSPILSSKPISEFLTSSGTSGGERKLMPTIEEELDRRSLLYSLLMPVMSQFVPGLENGKGMYFLFIKSESKTPGGLPARPVLTSYYKSSHFKERPYDPYTNYTSPNETILCSDSYQSMYSQMLCGLCQHQEVLRVGAV 231          
BLAST of FC925657 vs. ExPASy Swiss-Prot
Match: GH34_ARATH (Indole-3-acetic acid-amido synthetase GH3.4 OS=Arabidopsis thaliana GN=GH3.4 PE=1 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 5.483e-86
Identity = 163/230 (70.87%), Postives = 193/230 (83.91%), Query Frame = 2
Query:   80 MAVDSALSSPLGPPAC-EKDAKALRFIEEMTRNAEAVQEKVLAEILSRNADVEYLKRYKLGGATDRETFKSKLPIIKYEDLQPEIQRIANGDRSAILSAHPISEFLTSSGTSAGERKLMPTIQEELDRRQLLYSLLMPVMNLYVPGLDKGKALYFLFVKSETRTPGGLLARPVLTSYYKSEHFKTRPYDPYNVYTSPNEAILCADSFQSMYAQMLCGLLEREQVLRLGAV 766
            MAVDS L S +  P   E + KAL+FIEE+TRN ++VQEKVL EILSRN++ EYLKR+ L GA DR++FKSK+P++ YEDL+ +IQRI+NGDRS ILS+HPI+EFLTSSGTSAGERKLMPTI+E+++RRQLL +LLMPVMNLYVPGLDKGK LYFLFVKSE+ T GGL ARP LTSYYKS++F+T   D  +VYTSP EAILC DS QSMY QMLCGLL R +V RLGAV
Sbjct:    1 MAVDSLLQSGMASPTTSETEVKALKFIEEITRNPDSVQEKVLGEILSRNSNTEYLKRFDLNGAVDRKSFKSKVPVVIYEDLKTDIQRISNGDRSPILSSHPITEFLTSSGTSAGERKLMPTIEEDINRRQLLGNLLMPVMNLYVPGLDKGKGLYFLFVKSESTTSGGLPARPALTSYYKSDYFRTSDSD--SVYTSPKEAILCCDSSQSMYTQMLCGLLMRHEVNRLGAV 228          
BLAST of FC925657 vs. ExPASy Swiss-Prot
Match: GH31_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.1 OS=Oryza sativa subsp. japonica GN=GH3.1 PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 8.213e-74
Identity = 140/211 (66.35%), Postives = 167/211 (79.15%), Query Frame = 2
Query:  137 AKALRFIEEMTRNAEAVQEKVLAEILSRNADVEYLKRYKLGGATDR-ETFKSKLPIIKYEDLQPEIQRIANGDRSAILSAHPISEFLTSSGTSAGERKLMPTIQEELDRRQLLYSLLMPVMNLYVPGLDKGKALYFLFVKSETRTPGGLLARPVLTSYYKSEHFKTRPYDPYNVYTSPNEAILCADSFQSMYAQMLCGLLEREQVLRLGAV 766
            A+AL FIE +T NA  VQ +VL EIL++NA  EYL+RY + G+ D  + F+  +P++ YE LQP+I RIANGD S I S  PISEFLTSSGTS GERKLMPTI +E++RR LLYSLLMPVM+  V GLDKGKA+Y LFVK+E+RTPGGL ARPVLTSYY+S  F  RP DPY  YTSP+EAILC DS+QSMYAQ+LCGL+ R  VLR+GAV
Sbjct:   21 AEALEFIEHVTANAGQVQRRVLGEILAQNAPAEYLRRYGIPGSPDVVDAFRRLVPLVTYEGLQPDILRIANGDTSPIFSGKPISEFLTSSGTSGGERKLMPTIADEMNRRSLLYSLLMPVMSQSVSGLDKGKAMYLLFVKAESRTPGGLAARPVLTSYYRSRQFLDRPRDPYTSYTSPDEAILCVDSYQSMYAQLLCGLVHRADVLRVGAV 231          
The following BLAST results are available for this feature:
BLAST of FC925657 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
GH31_ARATH1.693e-11186.46Probable indole-3-acetic acid-amido synthetase GH3... [more]
GH32_ARATH9.634e-9978.26Indole-3-acetic acid-amido synthetase GH3.2 OS=Ara... [more]
GH33_ARATH3.661e-9878.17Indole-3-acetic acid-amido synthetase GH3.3 OS=Ara... [more]
GH32_ORYSJ7.145e-9476.28Probable indole-3-acetic acid-amido synthetase GH3... [more]
GH38_ORYSJ3.546e-9374.67Probable indole-3-acetic acid-amido synthetase GH3... [more]
GH38_ORYSI3.546e-9374.67Probable indole-3-acetic acid-amido synthetase GH3... [more]
GH36_ARATH4.486e-8872.77Indole-3-acetic acid-amido synthetase GH3.6 OS=Ara... [more]
GH35_ARATH4.959e-8771.83Indole-3-acetic acid-amido synthetase GH3.5 OS=Ara... [more]
GH34_ARATH5.483e-8670.87Indole-3-acetic acid-amido synthetase GH3.4 OS=Ara... [more]
GH31_ORYSJ8.213e-7466.35Probable indole-3-acetic acid-amido synthetase GH3... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YN08FM1 TF Citrus clementina cDNA clone KN0AAP8YN08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925657 ID=FC925657; Name=FC925657; organism=Citrus clementina; type=EST; length=767bp
CTTCAAGAACTCATATTTCACCCATTAAAAACAATTAAAAACAAATCTCT
CTATTTCACTCCATAAAAGCTCTCTTAAAATGGCCGTCGATTCAGCACTT
TCATCACCACTCGGCCCTCCAGCATGTGAAAAAGATGCAAAAGCTTTAAG
ATTCATTGAGGAAATGACCCGAAATGCCGAGGCGGTTCAAGAGAAGGTCC
TGGCCGAAATCTTGAGCCGTAACGCCGACGTTGAATACCTGAAACGGTAC
AAACTCGGCGGAGCAACTGACAGGGAAACGTTCAAGTCAAAGCTTCCGAT
AATCAAATACGAAGATCTTCAGCCTGAAATTCAACGTATTGCCAACGGCG
ATCGTTCTGCTATCTTGTCAGCTCACCCCATCTCCGAATTCCTCACCAGT
TCTGGGACTTCGGCTGGTGAAAGAAAGCTGATGCCAACGATTCAAGAAGA
GCTGGATCGTCGCCAGCTTCTGTACAGTCTTCTAATGCCAGTGATGAATC
TTTATGTGCCTGGCTTGGACAAAGGCAAAGCCCTCTACTTCTTGTTCGTG
AAATCCGAAACGCGGACCCCAGGAGGGCTCTTGGCTCGCCCTGTGCTGAC
CAGCTACTACAAAAGTGAGCACTTCAAGACTCGACCGTATGACCCTTACA
ATGTCTACACAAGCCCAAACGAGGCCATCCTTTGCGCTGACTCGTTCCAG
AGCATGTACGCACAAATGCTTTGCGGCTTGTTGGAGCGTGAACAAGTTCT
CAGGCTAGGCGCAGTTT
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