FC925658
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925658 vs. ExPASy Swiss-Prot
Match: EXLA2_ARATH (Expansin-like A2 OS=Arabidopsis thaliana GN=EXLA2 PE=2 SV=1) HSP 1 Score: 310.071 bits (793), Expect = 6.858e-84 Identity = 144/208 (69.23%), Postives = 176/208 (84.62%), Query Frame = 1 Query: 52 SSATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHSNQTDFVISSRAFMALSNQ--GKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSPKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSRYDGK 669 SSA ACDRC+H +K AYFS ASALSSGAC YGS+A F GH+AA +PS+YKDG+GCGACFQ+RCKNPTLCS KGT VI+TDLN +NQTD V+SSRAF A++ G +D+LK G+VD+EY+RVPC+Y N+ + VRVEESS PNYLA+K+LYQGGQTE+VA+ +AQVGSS+W YM+R++GAVW T +VPNGALQFRFVVT+ YDGK Sbjct: 17 SSAAACDRCLHSSKAAYFSSASALSSGACAYGSMATGFFAGHIAAALPSIYKDGSGCGACFQVRCKNPTLCSSKGTTVIVTDLNKTNQTDLVLSSRAFRAMAKPVVGADRDLLKQGIVDIEYRRVPCDYGNKKMNVRVEESSKNPNYLAIKLLYQGGQTEVVAIYIAQVGSSHWSYMTRSHGAVWVTDKVPNGALQFRFVVTAGYDGK 224
BLAST of FC925658 vs. ExPASy Swiss-Prot
Match: EXLA1_ARATH (Expansin-like A1 OS=Arabidopsis thaliana GN=EXLA1 PE=2 SV=1) HSP 1 Score: 308.145 bits (788), Expect = 2.606e-83 Identity = 144/209 (68.90%), Postives = 177/209 (84.69%), Query Frame = 1 Query: 52 SSATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHSNQTDFVISSRAFMALSNQ--GKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSPKPNYLAVKVLYQGGQTEMVAMDVAQVGSS-NWGYMSRNYGAVWDTSRVPNGALQFRFVVTSRYDGK 669 SS ACDRC+H++K AYFS ASALSSGAC YGS+A SF GH+AA +PS+YKDGAGCGACFQ+RCKNP LCS KGT V++TDLN SNQTD V+SSRAF A++ G +D+LK G+VD+EY+RVPC+Y N+N+ VRVEE+S KPNYL +K+LYQGGQTE+V++D+AQVGSS NWGYM+R++GAVW T +VP GA+QFRFVVT YDGK Sbjct: 16 SSVNACDRCLHRSKAAYFSSASALSSGACAYGSMATSFFAGHIAAAIPSIYKDGAGCGACFQVRCKNPKLCSTKGTIVMITDLNKSNQTDLVLSSRAFRAMAKPIVGADKDLLKQGIVDIEYQRVPCDYGNKNMNVRVEEASKKPNYLEIKLLYQGGQTEVVSIDIAQVGSSPNWGYMTRSHGAVWVTDKVPTGAIQFRFVVTGGYDGK 224
BLAST of FC925658 vs. ExPASy Swiss-Prot
Match: EXLA3_ARATH (Expansin-like A3 OS=Arabidopsis thaliana GN=EXLA3 PE=2 SV=1) HSP 1 Score: 298.516 bits (763), Expect = 2.065e-80 Identity = 140/208 (67.31%), Postives = 169/208 (81.25%), Query Frame = 1 Query: 52 SSATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQD--ILKLGVVDVEYKRVPCEYKNQNLAVRVEESSPKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSRYDGK 669 SS ACDRC+H++K +YFS ASALSSGAC YG +A SF GH+AA +PS+YKDGAGCGACFQ+RCKNP LC+ KGT V++TDLN SNQTD V+SSRAF A++ G D +LK G+VDVEY+RVPC Y +NL VRVEE+S KPNYLA+K+LYQGGQTE+V +D+A VGSS W YMSR++GAVW T +VP GALQF+F VT YDGK Sbjct: 16 SSVNACDRCLHRSKASYFSSASALSSGACAYGPMATSFFAGHIAAAIPSIYKDGAGCGACFQVRCKNPKLCNSKGTIVMVTDLNTSNQTDLVLSSRAFRAMAKPVVGVDKYLLKQGIVDVEYQRVPCNYGKRNLNVRVEEASKKPNYLAIKLLYQGGQTEVVGIDIAPVGSSQWSYMSRSHGAVWATDKVPTGALQFKFTVTGGYDGK 223
BLAST of FC925658 vs. ExPASy Swiss-Prot
Match: EXLA2_ORYSJ (Expansin-like A2 OS=Oryza sativa subsp. japonica GN=EXLA2 PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.312e-62 Identity = 112/208 (53.85%), Postives = 150/208 (72.12%), Query Frame = 1 Query: 52 SSATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTD-LNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEY-KNQNLAVRVEESSPKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSRYDGK 669 S + CDRCV ++K + + AL++G+CGYGSLA SFNGGHLAA P+L++ G GCGACFQ+RCK+ LCS G +V++TD +N+TD V+S+ A+ A++ G + VDVEYKRVPCEY +NL++RVEE S P L+++ LYQGGQT++VA+DVA VGSSNW +M+R+YG W T++ P G LQFR VVT YDGK Sbjct: 26 SMVSGCDRCVRRSKAGFRDSSIALNAGSCGYGSLAASFNGGHLAAASPALFRGGVGCGACFQVRCKDGKLCSTAGAKVVVTDEARSTNRTDLVLSAAAYAAMARPGMAAQLRTRRAVDVEYKRVPCEYAAGRNLSIRVEEKSRPPRELSIRFLYQGGQTDIVAVDVATVGSSNWKFMTRDYGPAWSTAQAPAGPLQFRVVVTGGYDGK 233
BLAST of FC925658 vs. ExPASy Swiss-Prot
Match: EXLA3_ORYSJ (Expansin-like A3 OS=Oryza sativa subsp. japonica GN=EXLA3 PE=2 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.147e-61 Identity = 111/209 (53.11%), Postives = 143/209 (68.42%), Query Frame = 1 Query: 58 ATACDRCVHQTKVAYFSQASAL---SSGACGYGSLALSF--NGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSPKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSRYDGK 669 A+AC+RCV K AY S L G CGYG++A+ NGG LAAG P ++ G GCG CFQMRC+N +CS G RV+LTD + SN TDF++ AF L+ G + KL + VEY+R+PC+YK++NL++ VEE S +PN L +K LYQGGQT+++A+DVAQVGSS+W +M+R YG VW R PNG LQFR VVT YDGK Sbjct: 26 ASACERCVRNGKAAYSPSLSPLPPGGGGGCGYGAMAMEMELNGGFLAAGGPRQHRGGLGCGRCFQMRCRNAEVCSNAGVRVVLTDFHRSNSTDFLLGGPAFAGLAKPGMAHKLKKLDALSVEYRRIPCDYKDKNLSILVEEQSKRPNNLVIKFLYQGGQTDILAVDVAQVGSSDWRFMTRVYGPVWSIDRAPNGPLQFRAVVTGGYDGK 234
BLAST of FC925658 vs. ExPASy Swiss-Prot
Match: EXLA1_ORYSJ (Expansin-like A1 OS=Oryza sativa subsp. japonica GN=EXLA1 PE=2 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.147e-61 Identity = 108/205 (52.68%), Postives = 149/205 (72.68%), Query Frame = 1 Query: 58 ATACDRCVHQTKVAYFSQASALSSGACGYGSLALSFNGG-HLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSPKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSRYDGK 669 A+ CDRCV +++ AY++ + L++G+CGYG+ A +FNGG LAA P+LY+ G GCGAC+Q+RCK+ LCS G RV++TD +N+T V+SS AF A++ G + +L VDVEYKRVPCEY++++L+VRV+E S PN L + LYQGGQT++VA+DVAQVGSS+W +M+R +G W + P G LQ R VVT YDGK Sbjct: 33 ASGCDRCVRRSRAAYYTSSLTLTAGSCGYGTAAATFNGGGFLAAAGPALYRGGVGCGACYQVRCKDKKLCSNAGARVVVTDRARTNRTGLVLSSPAFAAMARPGMAASLTELAAVDVEYKRVPCEYRHRSLSVRVDERSRGPNELTISFLYQGGQTDIVAVDVAQVGSSSWKFMTREHGPSWSMANAPPGPLQMRLVVTGGYDGK 237
BLAST of FC925658 vs. ExPASy Swiss-Prot
Match: EXLB1_ORYSJ (Expansin-like B1 OS=Oryza sativa subsp. japonica GN=EXLB1 PE=2 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 4.816e-37 Identity = 79/204 (38.73%), Postives = 119/204 (58.33%), Query Frame = 1 Query: 52 SSATACDRCVHQTKVAYF--SQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHSNQTDFVISSRAFMALSNQ-GKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSPKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTS 654 S ATA D ++ AY+ S +GAC YG+ + N G ++A SLY+DG GCGAC+Q+RC NP CS G +++TD S+ TDF++S AF ++ G +L LGVV +EY+RV C Y N+N+ ++ ESS PNYL ++ YQ G +++A+ + + + +SR +GAVW P+G L R + +S Sbjct: 20 SKATA-DANFTVSRAAYYPNSDIKGTENGACEYGAFGATLNNGDVSASA-SLYRDGVGCGACYQVRCTNPYYCSPNGVTIVITDSGASDGTDFILSQHAFTRMAQSTDAGTALLTLGVVGIEYRRVSCTYPNKNIVFKITESSNFPNYLEFEIWYQQGNQDIIAVQLCETVNLTCQLLSRTHGAVWAAVSPPSGPLSIRMLFSS 221
BLAST of FC925658 vs. ExPASy Swiss-Prot
Match: EXLB1_ARATH (Expansin-like B1 OS=Arabidopsis thaliana GN=EXLB1 PE=2 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 6.954e-36 Identity = 70/173 (40.46%), Postives = 100/173 (57.80%), Query Frame = 1 Query: 130 GACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSPKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVV 648 G CGYG N G ++ L+ +G GCGAC+Q+RCK P CS +G V+ TD + TDF++S +A+ ++ G + GVV+VEY+R+PC Y NL ++ E S P+YLA+ VLY GG +++A++V Q W M R +GAV D P G L RF+V Sbjct: 46 GHCGYGEFGRDINNGEVSGVSWRLWNNGTGCGACYQVRCKIPPHCSEEGVYVVATDSGEGDGTDFILSPKAYGRMARPGTENQLYSFGVVNVEYQRIPCRYAGYNLVYKIHEKSYNPHYLAILVLYVGGVNDILAVEVWQEDCKEWRRMRRVFGAVHDLQNPPRGTLTLRFLV 218
BLAST of FC925658 vs. ExPASy Swiss-Prot
Match: EXLA4_ORYSJ (Expansin-like A4 OS=Oryza sativa subsp. japonica GN=EXLA4 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.023e-35 Identity = 85/234 (36.32%), Postives = 136/234 (58.12%), Query Frame = 1 Query: 52 SSATACDRCVHQTKVAYF----SQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDL-------NHSNQT-----DFVISSRAFMALSNQG-KGQDILKLGVVDVEYKRVPCEYK-NQNLAVRVEESSPKPNYLAVKVLYQGGQTEMVAMDVAQVGS--------SNWGYMSRNYGA--VWDTSRVPNGALQFRFVVTSRYDGK 669 ++A +CD C + + A+ L+ GACG+G+ + N +AA L++ G CGAC+Q+RC++ LC G +V++ D+ N+T F I+ AF A++ QG ++ + ++V+++R+PCEY+ ++ LAVRVEE+S P +LA++ LYQGGQT++ A+++AQ + S+W YM+R GA VW TSR P G L+ R VVT+ GK Sbjct: 30 AAAHSCDWCTPRHSTVSILPTPTHAAHLTGGACGFGAAPMELN---VAAVTADLFRHGHACGACYQLRCRDRRLCGEDGVKVVVADMAKQPEQEGEMNRTAGGSLQFRITEDAFAAMAKQGVSAHELTRQRTLEVDFRRIPCEYRESRRLAVRVEEASRNPTHLAIRFLYQGGQTDIAAVEIAQANATPPSSSYYSSWRYMTRRDGAPGVWTTSRAPVGPLRLRVVVTAGSGGK 260
BLAST of FC925658 vs. ExPASy Swiss-Prot
Match: EXB10_ORYSJ (Expansin-B10 OS=Oryza sativa subsp. japonica GN=EXPB10 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.649e-27 Identity = 62/186 (33.33%), Postives = 103/186 (55.38%), Query Frame = 1 Query: 124 SSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHSNQT--DFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSPKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVW--DTSRVPNGALQFRFVVTSRYDGK 669 + GACGY + + G + G ++KDG GCG+CF+++C P CS K + +TD+N F +S AF A++ +GK +++ K G++D++++RV C+Y + E PNY AV V Y GG ++V +++ + GS W ++ ++GA+W DT + G R VT+ D K Sbjct: 60 NGGACGYKDIDKAPFLGMNSCGNDPIFKDGKGCGSCFEVKCSKPEACSDKPVIIHITDMNTEPIAAYHFDLSGHAFGAMAKEGKDEELRKAGIIDMQFRRVRCKYPGETKVTFHVEKGSNPNYFAVLVKYVGGDGDVVKVELKEKGSEEWKPLNESWGAIWRIDTPKPLKGPFSLR--VTTESDQK 243 The following BLAST results are available for this feature:
BLAST of FC925658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925658 ID=FC925658; Name=FC925658; organism=Citrus clementina; type=EST; length=670bpback to top |