FC925662

Overview
NameFC925662
Unique NameFC925662
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length786
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925662 vs. ExPASy Swiss-Prot
Match: SUBL_ARATH (Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 5.161e-55
Identity = 115/244 (47.13%), Postives = 140/244 (57.38%), Query Frame = 2
Query:   65 TYIVHMKHQAKPSTFSTHYDWXXXXXXXXXXXXXXXXXXXXXAYDGFAASLDPDQAQALRQSDAVLGVYEDTLYTLHTTRSPQFLGISSD----FGLSAGYSKLDFDKASLDVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDFSPKLCNKKLIGARFFSKGYHMAGGSFSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCWKNGSFGSDI 784
            TYIVHM     PS+F  H +W                     A  GF+  L  ++A +L     V+ V  +  Y LHTTR+P FLG+       F  +  YS         DV++GVLDTGVWPESKS+ D     +P+ W+G CE+G +F+  LCN+KLIGARFF++GY    G   +   E  SPRD DGHGTHT+STAAG  V  ASLLGYASG ARGMA  ARVA YKVCW  G F SDI
Sbjct:   31 TYIVHMAKSQMPSSFDLHSNWYDSSLRSISDSAELLYTYEN-AIHGFSTRLTQEEADSLMTQPGVISVLPEHRYELHTTRTPLFLGLDEHTADLFPEAGSYS---------DVVVGVLDTGVWPESKSYSDEGFGPIPSSWKGGCEAGTNFTASLCNRKLIGARFFARGYESTMGPIDES-KESRSPRDDDGHGTHTSSTAAGSVVEGASLLGYASGTARGMAPRARVAVYKVCWLGGCFSSDI 263          
BLAST of FC925662 vs. ExPASy Swiss-Prot
Match: CUCM1_CUCME (Cucumisin OS=Cucumis melo PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.412e-36
Identity = 89/243 (36.63%), Postives = 128/243 (52.67%), Query Frame = 2
Query:   59 KQTYIVHMKHQAK-PSTFSTHYDWXXXXXXXXXXXXXXXXXXXXXAYDGFAASLDPDQAQALRQSDAVLGVYEDTLYTLHTTRSPQFLGISSDFGLSAGYSKLDFDKASLDVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDFSPKLCNKKLIGARFFSKGYHMAGGSFSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCWKNGSFGSDI 784
            K  YIV+M  + + P +   H+                       +++GFA  L  ++A+ +   + V+ V+ + +  LHTTRS  FLG    F L+         +   ++++GVLDTG+WPES SFDD      P KW+G CE+  +F    CN+K+IGAR +  G  ++       P +   PRD +GHGTHTASTAAG  V+ A+L G   G ARG    AR+A YKVCW +G   +DI
Sbjct:   31 KNIYIVYMGRKLEDPDSAHLHHRAMLEQVVGSTFAPESVLHTYKRSFNGFAVKLTEEEAEKIASMEGVVSVFLNEMNELHTTRSWDFLG----FPLTVPRRS----QVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNFR---CNRKIIGARSYHIGRPIS-------PGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWNDGCSDTDI 255          
BLAST of FC925662 vs. ExPASy Swiss-Prot
Match: XSP1_ARATH (Xylem serine proteinase 1 OS=Arabidopsis thaliana GN=XSP1 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.195e-35
Identity = 95/246 (38.62%), Postives = 130/246 (52.85%), Query Frame = 2
Query:   56 AKQTYIVHM--KHQAKPSTFSTHYDWXXXXXXXXXXXXXXXXXXXXXAYDGFAASLDPDQAQALRQSDAVLGVYEDTLYTLHTTRSPQFLGISSDFGLSAGYSKLDFDKASLDVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDFSPKLCNKKLIGARFFSKGYHMAGGSFSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCW-KNGSFGSDI 784
            AK  YI+++  +      T  TH +                      A++ FAA L P +A+ + + + V+ V  +    LHTT+S  F+G+     L+A        KA  DVIIGVLDTG+ P+S+SF D  +   P KW+G C    +F+   CN K+IGA++F    ++  G       E  SP D DGHGTHT+ST AGV VANASL G A+G ARG    AR+A YKVCW ++G    DI
Sbjct:   34 AKDFYIIYLGDRPDNTEETIKTHINLLSSLNISQEEAKERKVYSYTKAFNAFAAKLSPHEAKKMMEMEEVVSVSRNQYRKLHTTKSWDFVGLP----LTAKRHL----KAERDVIIGVLDTGITPDSESFLDHGLGPPPAKWKGSCGPYKNFTG--CNNKIIGAKYFKHDGNVPAG-------EVRSPIDIDGHGTHTSSTVAGVLVANASLYGIANGTARGAVPSARLAMYKVCWARSGCADMDI 262          
The following BLAST results are available for this feature:
BLAST of FC925662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
SUBL_ARATH5.161e-5547.13Subtilisin-like protease OS=Arabidopsis thaliana G... [more]
CUCM1_CUCME1.412e-3636.63Cucumisin OS=Cucumis melo PE=1 SV=1[more]
XSP1_ARATH1.195e-3538.62Xylem serine proteinase 1 OS=Arabidopsis thaliana ... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP8YN11FM1 TF Citrus clementina cDNA clone KN0AAP8YN11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925662 ID=FC925662; Name=FC925662; organism=Citrus clementina; type=EST; length=786bp
CTTCTTCTTCACCGTACTTCTTCTCCTACCATGCTTGTCACTCTCAGTGA
CGGCGGCCAAGCAAACCTACATAGTTCACATGAAACACCAAGCAAAGCCC
TCAACTTTCTCCACCCACTACGATTGGTACGCATCGAGCGTTCAGTCTCT
CTCATCTTCCACAGATTCTCTTCTGTACACCTACAACACTGCATACGACG
GCTTCGCTGCCTCACTTGACCCAGATCAAGCCCAGGCTCTCCGCCAATCC
GACGCCGTTCTCGGAGTCTACGAGGACACTCTCTACACCCTCCACACTAC
TCGGTCCCCTCAGTTCCTCGGCATAAGCTCTGACTTCGGCTTGTCGGCGG
GCTACAGCAAGCTCGACTTCGACAAGGCCTCCCTTGATGTTATCATTGGT
GTTCTCGACACTGGGGTTTGGCCCGAGTCTAAAAGTTTCGATGACTCCGC
CATGCCTGAGGTTCCAACCAAGTGGCGCGGCCAGTGCGAGTCCGGTCCTG
ATTTTAGTCCCAAACTTTGTAACAAAAAGCTCATTGGCGCTCGTTTTTTC
TCCAAAGGCTACCACATGGCTGGTGGAAGTTTCTCTAAGAAGCCAAACGA
ACCCGAGTCGCCTCGTGATTATGACGGACACGGTACTCACACGGCCAGTA
CGGCCGCCGGCGTACCCGTCGCCAATGCCAGTCTCCTCGGTTACGCCAGC
GGCGTCGCTCGTGGAATGGCCACGCACGCGCGTGTTGCCACCTACAAAGT
TTGCTGGAAAAATGGAAGTTTCGGATCCGACATTCT
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