FC925747
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925747 vs. ExPASy Swiss-Prot
Match: RLA02_ARATH (60S acidic ribosomal protein P0-2 OS=Arabidopsis thaliana GN=RPP0B PE=1 SV=2) HSP 1 Score: 196.052 bits (497), Expect = 9.965e-50 Identity = 99/127 (77.95%), Postives = 109/127 (85.83%), Query Frame = 3 Query: 171 VVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPP 551 +VKA+KAEKKIAYD KLCQL++EYTQILV AADNVGS QLQNIR+GLRGDSVVLMGKNTMMKR++R+H+E TGNTA LNL+PLLQGNVGLIFTKGDL GAPARVGLVAPIDVVV P Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQP 127
BLAST of FC925747 vs. ExPASy Swiss-Prot
Match: RLA01_ARATH (60S acidic ribosomal protein P0-1 OS=Arabidopsis thaliana GN=RPP0A PE=2 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 2.220e-49 Identity = 99/128 (77.34%), Postives = 109/128 (85.16%), Query Frame = 3 Query: 168 MVVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPP 551 M VKA+KAEKKI YD+KLCQLL EY+QILV AADNVGS QLQNIR+GLRGDSVVLMGKNTMMKR++R+HA+KTGN AFL+L+PLLQGNVGLIFTKGDL GAPARVGLVAPIDVVV P Sbjct: 1 MAVKATKAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQP 128
BLAST of FC925747 vs. ExPASy Swiss-Prot
Match: RLA03_ARATH (60S acidic ribosomal protein P0-3 OS=Arabidopsis thaliana GN=RPP0C PE=1 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 2.899e-49 Identity = 98/127 (77.17%), Postives = 109/127 (85.83%), Query Frame = 3 Query: 171 VVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPP 551 +VKA+KAEKKIAYD KLCQL++EYTQILV AADNVGS QLQNIR+GLRGDSVVLMGKNTMMKR++R+H+E +GNTA LNL+PLLQGNVGLIFTKGDL GAPARVGLVAPIDVVV P Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQP 127
BLAST of FC925747 vs. ExPASy Swiss-Prot
Match: RLA0_SOYBN (60S acidic ribosomal protein P0 OS=Glycine max PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 3.787e-49 Identity = 99/128 (77.34%), Postives = 107/128 (83.59%), Query Frame = 3 Query: 168 MVVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPP 551 M K +KAEKKIAYDAKLC L+EEY QILV +DNVGS+QLQNIR+GLRGDSVVLMGKNTMMKR++RMHAEKTGN A+LNLIPLL GNVGLIFTKGDL GAPARVGLVAPIDVVVPP Sbjct: 1 MAPKQTKAEKKIAYDAKLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNTMMKRSVRMHAEKTGNNAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPP 128
BLAST of FC925747 vs. ExPASy Swiss-Prot
Match: RLA0_LUPLU (60S acidic ribosomal protein P0 OS=Lupinus luteus PE=2 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 9.327e-48 Identity = 99/128 (77.34%), Postives = 105/128 (82.03%), Query Frame = 3 Query: 168 MVVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPP 551 M KA+KAEKKI YD KLCQLL+EYTQILV ADNVGS QLQNIR+GLRGDSVVLMGKNTMMKR++R+HAEKTGN AFLNLIPLL GNVGLIFTKG L GAPA VGLVAPIDVVVPP Sbjct: 1 MAPKATKAEKKIVYDGKLCQLLDEYTQILVVNADNVGSKQLQNIRQGLRGDSVVLMGKNTMMKRSVRIHAEKTGNQAFLNLIPLLIGNVGLIFTKGYLKEVSEEVAKYKVGAPACVGLVAPIDVVVPP 128
BLAST of FC925747 vs. ExPASy Swiss-Prot
Match: RLA0_ORYSJ (60S acidic ribosomal protein P0 OS=Oryza sativa subsp. japonica GN=Os08g0130500 PE=1 SV=3) HSP 1 Score: 181.415 bits (459), Expect = 2.540e-45 Identity = 87/128 (67.97%), Postives = 105/128 (82.03%), Query Frame = 3 Query: 168 MVVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPP 551 M +K +KAEKK+AYD KLCQLL+EYT++L+A ADNVGS+QLQ IR+GLRGDS+VLMGKNT+++R I++HA+ TGN FL L+PLL GNVGLIFTKGDL GAPARVGLVAP+DVVVPP Sbjct: 1 MAIKRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHADNTGNKEFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPP 128
BLAST of FC925747 vs. ExPASy Swiss-Prot
Match: RLA0_MAIZE (60S acidic ribosomal protein P0 OS=Zea mays GN=RP-P0 PE=1 SV=3) HSP 1 Score: 174.481 bits (441), Expect = 3.105e-43 Identity = 88/128 (68.75%), Postives = 103/128 (80.47%), Query Frame = 3 Query: 168 MVVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPP 551 M +K +KAEKKIAYD KLC LL+EYT++L+A ADNVGS QLQ+IRRGLRGDSVVLMGKNT+++R I+++AEKTGN F L+ LL GNVGLIFTKGDL GAPARVGLVAP+DVVVPP Sbjct: 1 MAIKRTKAEKKIAYDKKLCSLLDEYTKVLIALADNVGSKQLQDIRRGLRGDSVVLMGKNTLIRRCIKVYAEKTGNHTFDPLMDLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPP 128
BLAST of FC925747 vs. ExPASy Swiss-Prot
Match: RLA0_CHERU (60S acidic ribosomal protein P0 OS=Chenopodium rubrum PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.180e-42 Identity = 89/128 (69.53%), Postives = 100/128 (78.12%), Query Frame = 3 Query: 168 MVVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPP 551 M VK +KAEKKIAYD KLCQLL+EY+Q+L+A+ADNVGS+QLQ IR GLRGDS+VLMGKNTMMKR+IR+HAE TGN N+ L NVGLIFTKGDL GAPAR GLVAPIDVVVPP Sbjct: 1 MAVKPTKAEKKIAYDQKLCQLLDEYSQVLIASADNVGSNQLQAIRIGLRGDSIVLMGKNTMMKRSIRLHAENTGNENLRNVEQLFLPNVGLIFTKGDLNQVREEISKYKVGAPARFGLVAPIDVVVPP 128
BLAST of FC925747 vs. ExPASy Swiss-Prot
Match: RLA0_CERCA (60S acidic ribosomal protein P0 OS=Ceratitis capitata GN=RpLP0 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 3.813e-25 Identity = 59/129 (45.74%), Postives = 80/129 (62.02%), Query Frame = 3 Query: 171 VVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPRH 557 +V+ +KA K Y K+ +L +EY + + ADNVGS Q+QNIR LRG VVLMGKNTMM++ IR H E N L+P ++GNVG +FTKGDL APAR G +AP+ V++P ++ Sbjct: 1 MVRENKAAWKAQYFLKVVELFDEYPKCFIVGADNVGSKQMQNIRTSLRGLGVVLMGKNTMMRKAIRGHLE--NNAQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARAGAIAPLPVIIPAQN 127
BLAST of FC925747 vs. ExPASy Swiss-Prot
Match: RLA0_DROME (60S acidic ribosomal protein P0 OS=Drosophila melanogaster GN=RpLP0 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.892e-24 Identity = 58/129 (44.96%), Postives = 81/129 (62.79%), Query Frame = 3 Query: 171 VVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPRH 557 +V+ +KA K Y K+ +L +E+ + + ADNVGS Q+QNIR LRG +VVLMGKNTMM++ IR H E N L+P ++GNVG +FTKGDL APAR G +AP+ V++P ++ Sbjct: 1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKAIRGHLE--NNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLHVIIPAQN 127 The following BLAST results are available for this feature:
BLAST of FC925747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925747 ID=FC925747; Name=FC925747; organism=Citrus clementina; type=EST; length=557bpback to top |