FC925769
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925769 vs. ExPASy Swiss-Prot
Match: SMT3_ARATH (Ubiquitin-like protein SMT3 OS=Arabidopsis thaliana GN=SMT3 PE=1 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 2.040e-41 Identity = 82/92 (89.13%), Postives = 86/92 (93.48%), Query Frame = 3 Query: 72 QEEDKIPVDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGALG 347 QEEDK P D AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV++NSIAFLFDGRRLR EQTPDEL+MEDGDEIDAMLHQTGG+ G Sbjct: 5 QEEDKKPGDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFLFDGRRLRAEQTPDELDMEDGDEIDAMLHQTGGSGG 96
BLAST of FC925769 vs. ExPASy Swiss-Prot
Match: SMT3_ORYSJ (Ubiquitin-like protein SMT3 OS=Oryza sativa subsp. japonica GN=SMT3 PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 1.462e-39 Identity = 81/93 (87.10%), Postives = 84/93 (90.32%), Query Frame = 3 Query: 75 EEDKIPVDQS---AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGAL 344 EEDK P AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV++N+IAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG L Sbjct: 6 EEDKKPAGGEGGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNAIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGCL 98
BLAST of FC925769 vs. ExPASy Swiss-Prot
Match: PMT3_SCHPO (Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe GN=pmt3 PE=1 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 1.243e-22 Identity = 48/77 (62.34%), Postives = 60/77 (77.92%), Query Frame = 3 Query: 108 HINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 338 HINLKV GQD NEVFF+IK++T+ KLM YC RQ +NS+ FL DG R+R +QTP EL+MEDGD+I+A+L Q GG Sbjct: 35 HINLKVVGQDNNEVFFKIKKTTEFSKLMKIYCARQGKSMNSLRFLVDGERIRPDQTPAELDMEDGDQIEAVLEQLGG 111
BLAST of FC925769 vs. ExPASy Swiss-Prot
Match: SUMO3_MOUSE (Small ubiquitin-related modifier 3 OS=Mus musculus GN=Sumo3 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 6.385e-19 Identity = 45/85 (52.94%), Postives = 56/85 (65.88%), Query Frame = 3 Query: 99 QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGALGSG 353 ++ HINLKV GQDG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ + TP +LEMED D ID QTGG+ G Sbjct: 13 ENDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGSASRG 97
BLAST of FC925769 vs. ExPASy Swiss-Prot
Match: SMO2A_XENLA (Small ubiquitin-related modifier 2-A OS=Xenopus laevis GN=sumo2-A PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 6.385e-19 Identity = 44/88 (50.00%), Postives = 58/88 (65.91%), Query Frame = 3 Query: 78 EDKIPVDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGA 341 ++ + + + HINLKV GQDG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ + TP +LEMED D ID QTGG+ Sbjct: 7 KEGVKTENNDHINLKVAGQDGSVVQFKIKRQTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGS 94
BLAST of FC925769 vs. ExPASy Swiss-Prot
Match: SUMO3_XENTR (Small ubiquitin-related modifier 3 OS=Xenopus tropicalis GN=sumo3 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 8.339e-19 Identity = 45/80 (56.25%), Postives = 54/80 (67.50%), Query Frame = 3 Query: 99 QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 338 ++ HINLKV GQDG+ V F+IKR T L KLM AYCDRQ + + I F FDG+ + TP +LEMED D ID QTGG Sbjct: 13 ENDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCDRQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGG 92
BLAST of FC925769 vs. ExPASy Swiss-Prot
Match: SUMO3_XENLA (Small ubiquitin-related modifier 3 OS=Xenopus laevis GN=sumo3 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 8.339e-19 Identity = 45/80 (56.25%), Postives = 54/80 (67.50%), Query Frame = 3 Query: 99 QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 338 ++ HINLKV GQDG+ V F+IKR T L KLM AYCDRQ + + I F FDG+ + TP +LEMED D ID QTGG Sbjct: 13 ENDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCDRQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGG 92
BLAST of FC925769 vs. ExPASy Swiss-Prot
Match: SUMO3_BOVIN (Small ubiquitin-related modifier 3 OS=Bos taurus GN=SUMO3 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 8.339e-19 Identity = 48/91 (52.75%), Postives = 59/91 (64.84%), Query Frame = 3 Query: 99 QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGA------LGSG 353 ++ HINLKV GQDG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ + TP +LEMED D ID QTGG+ LGSG Sbjct: 13 ENDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGSRVASCLLGSG 103
BLAST of FC925769 vs. ExPASy Swiss-Prot
Match: SUMO2_XENTR (Small ubiquitin-related modifier 2 OS=Xenopus tropicalis GN=sumo2 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 8.339e-19 Identity = 44/88 (50.00%), Postives = 58/88 (65.91%), Query Frame = 3 Query: 78 EDKIPVDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGA 341 ++ + + + HINLKV GQDG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ + TP +LEMED D ID QTGG+ Sbjct: 7 KEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLNKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGS 94
BLAST of FC925769 vs. ExPASy Swiss-Prot
Match: SMO2B_XENLA (Small ubiquitin-related modifier 2-B OS=Xenopus laevis GN=sumo2-B PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 8.339e-19 Identity = 44/88 (50.00%), Postives = 58/88 (65.91%), Query Frame = 3 Query: 78 EDKIPVDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGA 341 ++ + + + HINLKV GQDG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ + TP +LEMED D ID QTGG+ Sbjct: 7 KEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLNKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGS 94 The following BLAST results are available for this feature:
BLAST of FC925769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925769 ID=FC925769; Name=FC925769; organism=Citrus clementina; type=EST; length=480bpback to top |