FC925770
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925770 vs. ExPASy Swiss-Prot
Match: RISB_ARATH (6,7-dimethyl-8-ribityllumazine synthase, chloroplastic OS=Arabidopsis thaliana GN=At2g44050 PE=2 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 5.783e-68 Identity = 107/128 (83.59%), Postives = 121/128 (94.53%), Query Frame = 3 Query: 111 KTTVRGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYTAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASLFEHHLK 494 K + GA+ETFKKYSV+EE+I+V+WVPGSFEIGVVAQ LGKSGK+ AVLCIGAV+RGDTTHYDAVANSAASGVLSA +NSGVPCIFGVLTC++MDQALNR+GGK+GNKGAE ALTA+EMASLFEHHLK Sbjct: 100 KLLLEGAIETFKKYSVREEDIEVIWVPGSFEIGVVAQNLGKSGKFHAVLCIGAVIRGDTTHYDAVANSAASGVLSASINSGVPCIFGVLTCEDMDQALNRSGGKAGNKGAETALTALEMASLFEHHLK 227 HSP 2 Score: 54.6842 bits (130), Expect = 5.783e-68 Identity = 26/36 (72.22%), Postives = 31/36 (86.11%), Query Frame = 1 Query: 7 SSLQTEAVRHLTGFLTKNEGLRFAVVVARFNELVTK 114 S +QT AVRH+TG L + EGLRFA+VVARFNE+VTK Sbjct: 65 SFVQTAAVRHVTGSLIRGEGLRFAIVVARFNEVVTK 100
BLAST of FC925770 vs. ExPASy Swiss-Prot
Match: RISB_SPIOL (6,7-dimethyl-8-ribityllumazine synthase, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 4.378e-62 Identity = 101/125 (80.80%), Postives = 118/125 (94.40%), Query Frame = 3 Query: 120 VRGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYTAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASLFEHHLK 494 + GAL+TFKKYSV E+ IDVVWVPG++E+GV AQ LGKSGKY A++C+GAVV+GDT+HYDAV NSA+SGVLSAG+NSGVPC+FGVLTCDNMDQA+NRAGGK+GNKGAE+ALTAIEMASLFEHHLK Sbjct: 98 MEGALDTFKKYSVNED-IDVVWVPGAYELGVTAQALGKSGKYHAIVCLGAVVKGDTSHYDAVVNSASSGVLSAGLNSGVPCVFGVLTCDNMDQAINRAGGKAGNKGAESALTAIEMASLFEHHLK 221 HSP 2 Score: 45.0542 bits (105), Expect = 4.378e-62 Identity = 21/36 (58.33%), Postives = 27/36 (75.00%), Query Frame = 1 Query: 7 SSLQTEAVRHLTGFLTKNEGLRFAVVVARFNELVTK 114 S + T AVR L G++TK + RFA+VVARFNE VT+ Sbjct: 60 SFVVTNAVRELEGYVTKAQSFRFAIVVARFNEFVTR 95
BLAST of FC925770 vs. ExPASy Swiss-Prot
Match: RISB_EXIS2 (6,7-dimethyl-8-ribityllumazine synthase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=ribH PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.438e-36 Identity = 66/119 (55.46%), Postives = 89/119 (74.79%), Query Frame = 3 Query: 120 VRGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYTAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASL 476 V GA + F+++ V + +D WVPG+FEI +VA++L KSG Y AV+ +GAV+RG T+HYD V N A GV A +GVP IFGVLT D+++QA+ RAG K+GNKG EAA++AIEMA+L Sbjct: 30 VGGANDAFRRHGVAADAVDTAWVPGAFEIPLVAEKLAKSGNYDAVITLGAVIRGATSHYDYVCNEVAKGVAGASRETGVPIIFGVLTTDSIEQAVERAGTKAGNKGYEAAVSAIEMANL 148 HSP 2 Score: 34.2686 bits (77), Expect = 3.438e-36 Identity = 17/23 (73.91%), Postives = 19/23 (82.61%), Query Frame = 1 Query: 43 GFLTKNEGLRFAVVVARFNELVT 111 GFLT EGLR A+V ARFNEL+T Sbjct: 5 GFLT-GEGLRVAIVAARFNELIT 26
BLAST of FC925770 vs. ExPASy Swiss-Prot
Match: RISB_PELTS (6,7-dimethyl-8-ribityllumazine synthase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=ribH PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 1.068e-34 Identity = 63/119 (52.94%), Postives = 91/119 (76.47%), Query Frame = 3 Query: 126 GALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYTAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASLFE 482 GAL+ ++ V +++I+V WVPG+FEI +VA+++ + KY AV+C+GAV+RG T H+D VA A GV G+ SGVP IFGV+T D+++QA+ RAG K+GNKG +AA+TAIEMA+L + Sbjct: 34 GALDALNRHGVADQDIEVAWVPGAFEIPMVARKMASAMKYDAVICLGAVIRGATPHFDYVAGEVAKGVARIGLESGVPTIFGVITADSIEQAIERAGAKAGNKGWDAAVTAIEMANLMK 152 HSP 2 Score: 29.261 bits (64), Expect = 1.068e-34 Identity = 13/26 (50.00%), Postives = 17/26 (65.38%), Query Frame = 1 Query: 34 HLTGFLTKNEGLRFAVVVARFNELVT 111 HL G +GLRF +V+ RFNE +T Sbjct: 8 HLIG-----QGLRFGIVIGRFNEFIT 28
BLAST of FC925770 vs. ExPASy Swiss-Prot
Match: RISB_CLOPS (6,7-dimethyl-8-ribityllumazine synthase OS=Clostridium perfringens (strain SM101 / Type A) GN=ribH PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.303e-34 Identity = 63/122 (51.64%), Postives = 95/122 (77.87%), Query Frame = 3 Query: 120 VRGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYTAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASLFEH 485 + GAL+ FK++ V+EENID+ WVPG+FEI ++A++L KSGKY V+C+G V+RG T+HYD V + G+ + +++ VP IFG++T +N++QA+ RAG K+GNKG +AA+ AIEMA+L E+ Sbjct: 31 IGGALDAFKRHGVEEENIDLAWVPGAFEIPLIAKKLAKSGKYAGVVCLGTVIRGATSHYDYVCGEVSKGIANVSLDTEVPVIFGIVTTENIEQAIERAGTKAGNKGFDAAMAAIEMANLLEN 152
BLAST of FC925770 vs. ExPASy Swiss-Prot
Match: RISB_CLOPE (6,7-dimethyl-8-ribityllumazine synthase OS=Clostridium perfringens GN=ribH PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.303e-34 Identity = 63/122 (51.64%), Postives = 95/122 (77.87%), Query Frame = 3 Query: 120 VRGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYTAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASLFEH 485 + GAL+ FK++ V+EENID+ WVPG+FEI ++A++L KSGKY V+C+G V+RG T+HYD V + G+ + +++ VP IFG++T +N++QA+ RAG K+GNKG +AA+ AIEMA+L E+ Sbjct: 31 IGGALDAFKRHGVEEENIDLAWVPGAFEIPLIAKKLAKSGKYAGVVCLGTVIRGATSHYDYVCGEVSKGIANVSLDTEVPVIFGIVTTENIEQAIERAGTKAGNKGFDAAMAAIEMANLLEN 152
BLAST of FC925770 vs. ExPASy Swiss-Prot
Match: RISB_ANOFW (6,7-dimethyl-8-ribityllumazine synthase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=ribH PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.393e-34 Identity = 67/117 (57.26%), Postives = 92/117 (78.63%), Query Frame = 3 Query: 126 GALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYTAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASL 476 GAL+ K++ V+E++IDV WVPG+FEI +VA+++ +S KY AV+ +GAV+RG T+HYD V N A G A ++SGVP IFGVLT D ++QA+ RAG K+GNKG EAAL+AIEMA++ Sbjct: 33 GALDGLKRHGVEEQHIDVAWVPGAFEIPLVAKKMAESKKYDAVITLGAVIRGATSHYDYVCNEVAKGTSHAALSSGVPVIFGVLTTDTIEQAIERAGTKAGNKGWEAALSAIEMANV 149 HSP 2 Score: 26.5646 bits (57), Expect = 1.393e-34 Identity = 10/16 (62.50%), Postives = 13/16 (81.25%), Query Frame = 1 Query: 64 GLRFAVVVARFNELVT 111 GL+ +VVARFNE +T Sbjct: 12 GLKIGIVVARFNEFIT 27
BLAST of FC925770 vs. ExPASy Swiss-Prot
Match: RISB_ACTP7 (6,7-dimethyl-8-ribityllumazine synthase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=ribH PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.814e-34 Identity = 64/119 (53.78%), Postives = 89/119 (74.79%), Query Frame = 3 Query: 126 GALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYTAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASLFE 482 GA++T ++ E NID WVPG+FEI +VA+++ SGKY AV+C+G V+RG TTHYD V N AA G+ + + +GVP IFGVLT +N++QA+ RAG K+GNKG+E AL AIEM ++ + Sbjct: 33 GAIDTLVRHGADENNIDTAWVPGAFEIPLVAKKMATSGKYDAVICLGTVIRGSTTHYDYVCNEAAKGIGAVALETGVPVIFGVLTTENIEQAIERAGTKAGNKGSECALGAIEMVNVLK 151 HSP 2 Score: 24.6386 bits (52), Expect = 1.814e-34 Identity = 11/24 (45.83%), Postives = 16/24 (66.67%), Query Frame = 1 Query: 37 LTGFLTKNEGLRFAVVVARFNELV 108 +TG L GL+F +V ARFN+ + Sbjct: 4 ITGNLVAT-GLKFGIVTARFNDFI 26
BLAST of FC925770 vs. ExPASy Swiss-Prot
Match: RISB_CLOB8 (6,7-dimethyl-8-ribityllumazine synthase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=ribH PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.814e-34 Identity = 61/119 (51.26%), Postives = 92/119 (77.31%), Query Frame = 3 Query: 120 VRGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYTAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASL 476 + GA++ K++ VKEE+ID+ WVPG+FEI ++A+++ KS KY V+C+GAV++G T+HYD V + + G+ S + SG P IFGVLT + ++QA+ RAG K+GNKG E+A++AIEMA+L Sbjct: 31 LEGAIDGLKRHGVKEEDIDIAWVPGAFEIPLIAKKMAKSPKYDGVICLGAVIKGSTSHYDYVCSEVSKGIASVSLESGKPVIFGVLTTNTIEQAIERAGTKAGNKGYESAVSAIEMANL 149 HSP 2 Score: 27.7202 bits (60), Expect = 1.814e-34 Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 1 Query: 58 NEGLRFAVVVARFNELV 108 +EGL+F +VV RFNE + Sbjct: 10 SEGLKFGIVVGRFNEFI 26
BLAST of FC925770 vs. ExPASy Swiss-Prot
Match: RISB_CLOP1 (6,7-dimethyl-8-ribityllumazine synthase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=ribH PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.903e-34 Identity = 62/122 (50.82%), Postives = 95/122 (77.87%), Query Frame = 3 Query: 120 VRGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYTAVLCIGAVVRGDTTHYDAVANSAASGVLSAGMNSGVPCIFGVLTCDNMDQALNRAGGKSGNKGAEAALTAIEMASLFEH 485 + GAL+ FK++ V+E+NID+ WVPG+FEI ++A++L KSGKY V+C+G V+RG T+HYD V + G+ + +++ VP IFG++T +N++QA+ RAG K+GNKG +AA+ AIEMA+L E+ Sbjct: 31 IDGALDAFKRHGVEEDNIDLAWVPGAFEIPLIAKKLAKSGKYAGVVCLGTVIRGATSHYDYVCGEVSKGIANVSLDTEVPVIFGIVTTENIEQAIERAGTKAGNKGFDAAMAAIEMANLLEN 152 The following BLAST results are available for this feature:
BLAST of FC925770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925770 ID=FC925770; Name=FC925770; organism=Citrus clementina; type=EST; length=586bpback to top |