FC925773

Overview
NameFC925773
Unique NameFC925773
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length747
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC925773 vs. ExPASy Swiss-Prot
Match: NADK2_ARATH (NAD kinase 2, chloroplastic OS=Arabidopsis thaliana GN=NADK2 PE=1 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 8.629e-73
Identity = 151/247 (61.13%), Postives = 175/247 (70.85%), Query Frame = 3 
Query:   18 EIVSSGPVSGVAETRYSQWSLSGNNLSPNHQNLPAGSEKSSDNNGYVSAGFSTNGFDRGDRSS-MTEANLLTSVTKNLDE---QXXXXXXXXXXXXNGKPSNSGDDDLGPIEGNMCASSTGVVRVQSRKKAEMFLVRTDGFSCNREKVTESSLAFTHPSTQQQMLMWKTTPRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACLGGDG 746
            +IV    +  +AET  S    +G  L  + Q+L  G+ K S  NG V A  +TN     +R +  + A +    + NL                  +G  S+S DD+ G IEGNMCAS+TGVVRVQSRKKAEMFLVRTDG SC REKVTESSLAFTHPSTQQQML+WKTTP+TVL+LKK G  LMEEAKE ASFLYHQE MN+LVEP+VHD+FARIPGFGFVQTFY+QDTSDLHERVDFVACLGGDG
Sbjct:  513 QIVDKDSIRRLAETGNS----NGTLLPTSSQSLDFGNGKFS--NGNVHASDNTNKSISDNRGNGFSAAPIAVPPSDNLSRAVGSHSVRESQTQRNNSGSSSDSSDDEAGAIEGNMCASATGVVRVQSRKKAEMFLVRTDGVSCTREKVTESSLAFTHPSTQQQMLLWKTTPKTVLLLKKLGQELMEEAKEAASFLYHQENMNVLVEPEVHDVFARIPGFGFVQTFYIQDTSDLHERVDFVACLGGDG 753
[Close]
BLAST of FC925773 vs. ExPASy Swiss-Prot
Match: NADK2_ORYSJ (Probable NAD kinase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0191400 PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 2.689e-66
Identity = 120/137 (87.59%), Postives = 131/137 (95.62%), Query Frame = 3 
Query:  336 IEGNMCASSTGVVRVQSRKKAEMFLVRTDGFSCNREKVTESSLAFTHPSTQQQMLMWKTTPRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACLGGDG 746
            ++GNMCAS+TGVVR+QSR+KAEMFLVRTDGFSC REKVTESSLAFTHPSTQQQMLMWK+ P+TVL+LKK G  LMEEAKEVASFL+HQEKMN+LVEPDVHDIFARIPG+GFVQTFY QDTSDLHERVDFVACLGGDG
Sbjct:  614 VDGNMCASATGVVRLQSRRKAEMFLVRTDGFSCTREKVTESSLAFTHPSTQQQMLMWKSPPKTVLLLKKLGDELMEEAKEVASFLHHQEKMNVLVEPDVHDIFARIPGYGFVQTFYTQDTSDLHERVDFVACLGGDG 750
The following BLAST results are available for this feature:
BLAST of FC925773 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
NADK2_ARATH8.629e-7361.13NAD kinase 2, chloroplastic OS=Arabidopsis thalian... [more]
NADK2_ORYSJ2.689e-6687.59Probable NAD kinase 2, chloroplastic OS=Oryza sati... [more]
back to top
Properties
Property NameValue
Genbank descriptionKN0AAP8YP07FM1 TF Citrus clementina cDNA clone KN0AAP8YP07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925773 ID=FC925773; Name=FC925773; organism=Citrus clementina; type=EST; length=747bp
TGGACGTGTTGCCATGTGAGATTGTTTCTTCTGGTCCTGTATCCGGAGTT
GCAGAGACAAGATATTCCCAGTGGTCACTTAGTGGAAATAATCTATCTCC
GAACCATCAAAATTTACCTGCTGGAAGTGAGAAGTCTTCAGACAATAATG
GTTATGTTTCAGCTGGTTTTAGTACGAACGGATTTGATAGAGGGGACAGG
AGTTCCATGACTGAAGCAAATCTCTTGACCTCTGTGACTAAGAATTTAGA
CGAACAAGTCATTTCCAGTTCTGTTAGGGATGTTCGGAGGAGCAATGGGA
AACCCTCGAATTCAGGTGATGATGACTTGGGACCAATTGAAGGAAATATG
TGTGCTTCTTCAACTGGTGTTGTAAGGGTGCAGTCAAGAAAGAAAGCAGA
AATGTTTTTGGTGCGAACAGATGGATTCTCTTGTAACCGGGAAAAGGTGA
CCGAGTCCTCCTTGGCCTTCACTCATCCTAGCACCCAGCAACAGATGCTT
ATGTGGAAAACTACGCCAAGGACCGTATTAGTGTTGAAAAAGCCTGGGCC
AGCACTCATGGAAGAAGCTAAAGAGGTTGCTTCTTTCTTGTATCACCAAG
AGAAGATGAATATTCTTGTTGAGCCAGATGTGCACGACATATTTGCTAGA
ATCCCAGGTTTTGGATTTGTTCAGACCTTTTATCTTCAAGATACCAGCGA
TCTTCATGAGAGGGTTGATTTTGTGGCCTGCTTGGGGGGAGATGGGG
back to top