FC925777

Overview
NameFC925777
Unique NameFC925777
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length654
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC925777 vs. ExPASy Swiss-Prot
Match: EF2_BETVU (Elongation factor 2 OS=Beta vulgaris PE=2 SV=1)

HSP 1 Score: 385.185 bits (988), Expect = 1.623e-106
Identity = 196/209 (93.78%), Postives = 202/209 (96.65%), Query Frame = 1 
Query:   28 MVKFTAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGHVQVYPEKGTV 654
            MVKFTA+ELR IMD  HNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR DEAERGITIKSTGISLYY+MTD AL+S+KGER+GN+YLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAY TFQKVIENANVIMATYEDPLLG VQVYPEKGTV
Sbjct:    1 MVKFTADELRAIMDCKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYQMTDEALQSYKGERKGNDYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYTTFQKVIENANVIMATYEDPLLGDVQVYPEKGTV 209
[Close]
BLAST of FC925777 vs. ExPASy Swiss-Prot
Match: EF2_CHLKE (Elongation factor 2 OS=Chlorella kessleri PE=2 SV=1)

HSP 1 Score: 334.339 bits (856), Expect = 3.286e-91
Identity = 168/209 (80.38%), Postives = 186/209 (89.00%), Query Frame = 1 
Query:   28 MVKFTAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGHVQVYPEKGTV 654
            MVKFT +++R +M++ +NIRNMSVIAHVDHGKSTLTDSLVAAAGIIA E AGD R+TDTR DE ERGITIKSTGISLYY+MTD  LK F GERQGN++LINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLT+NK+DRCFLEL +D EEAY  +++VIENANVIMATY D  LG  Q +PE GTV
Sbjct:    1 MVKFTIDQIRGLMEYQNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAFEQAGDQRLTDTRADEQERGITIKSTGISLYYQMTDEQLKGFTGERQGNDFLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTINKIDRCFLELMLDPEEAYLAYRRVIENANVIMATYADEHLGDTQTHPEAGTV 209
[Close]
BLAST of FC925777 vs. ExPASy Swiss-Prot
Match: EF2_YEAST (Elongation factor 2 OS=Saccharomyces cerevisiae GN=EFT1 PE=1 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 3.190e-78
Identity = 146/209 (69.86%), Postives = 171/209 (81.82%), Query Frame = 1 
Query:   28 MVKFTAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGHVQVYPEKGTV 654
            MV FT +++R +MD   N+RNMSVIAHVDHGKSTLTDSLV  AGII+   AG+ R TDTR+DE ERGITIKST ISLY EM+D  +K  K +  GN +LINLIDSPGHVDFSSEVTAALR+TDGALVVVD IEGVCVQTETVLRQALGERI+PV+ +NK+DR  LELQV  E+ YQTF + +E+ NVI++TY D +LG VQVYP +GTV
Sbjct:    1 MVAFTVDQMRSLMDKVTNVRNMSVIAHVDHGKSTLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGITIKSTAISLYSEMSDEDVKEIKQKTDGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETVLRQALGERIKPVVVINKVDRALLELQVSKEDLYQTFARTVESVNVIVSTYADEVLGDVQVYPARGTV 209
[Close]
BLAST of FC925777 vs. ExPASy Swiss-Prot
Match: EF2_PICPA (Elongation factor 2 OS=Pichia pastoris GN=EFT1 PE=3 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 4.166e-78
Identity = 144/209 (68.90%), Postives = 171/209 (81.82%), Query Frame = 1 
Query:   28 MVKFTAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGHVQVYPEKGTV 654
            MV FT +++R +MD   N+RNMSVIAHVDHGKSTLTDSLV  AGII+   AG+ R TDTR+DE ERGITIKST ISLY EM D  +K  K + +GN +LINLIDSPGHVDFSSEVTAALR+TDGALVVVDC+EGVCVQTETVLRQALGERI+PV+ +NK+DR  LELQV  E+ YQ+F + +E+ NV++ATY D  +G  QVYPE+GTV
Sbjct:    1 MVNFTVDQMRSLMDKVTNVRNMSVIAHVDHGKSTLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGITIKSTAISLYSEMGDDDVKEIKQKTEGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCVQTETVLRQALGERIKPVVVINKVDRALLELQVTKEDLYQSFARTVESVNVVIATYTDKTIGDNQVYPEQGTV 209
[Close]
BLAST of FC925777 vs. ExPASy Swiss-Prot
Match: EF2_CANAL (Elongation factor 2 OS=Candida albicans GN=EFT2 PE=1 SV=2)

HSP 1 Score: 290.426 bits (742), Expect = 5.442e-78
Identity = 145/209 (69.38%), Postives = 170/209 (81.34%), Query Frame = 1 
Query:   28 MVKFTAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGHVQVYPEKGTV 654
            MV FT E++R +MD   N+RNMSVIAHVDHGKSTL+DSLV  AGII+   AGD R  DTR+DE ERGITIKST ISLY  MTD  +K  K +  GN +L+NLIDSPGHVDFSSEVTAALR+TDGALVVVD +EGVCVQTETVLRQALGERI+PV+ +NK+DR  LELQ   E+ YQTF + +E+ NVI++TY DP+LG VQVYP+KGTV
Sbjct:    1 MVAFTIEQIRGLMDKVTNVRNMSVIAHVDHGKSTLSDSLVQKAGIISAAKAGDARFMDTRKDEQERGITIKSTAISLYASMTDEDVKDIKQKTDGNSFLVNLIDSPGHVDFSSEVTAALRVTDGALVVVDTVEGVCVQTETVLRQALGERIKPVVVINKVDRALLELQTTKEDLYQTFARTVESVNVIISTYCDPVLGDVQVYPQKGTV 209
[Close]
BLAST of FC925777 vs. ExPASy Swiss-Prot
Match: EF2_SCHPO (Elongation factor 2 OS=Schizosaccharomyces pombe GN=eft1 PE=1 SV=2)

HSP 1 Score: 289.656 bits (740), Expect = 9.282e-78
Identity = 145/209 (69.38%), Postives = 168/209 (80.38%), Query Frame = 1 
Query:   28 MVKFTAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGHVQVYPEKGTV 654
            MV FT EE+R +M  P N+RNMSVIAHVDHGKSTLTDSLV  AGII+   AGD R  DTR DE ERG+TIKST ISL+ EMTD  +K  K    G ++L+NLIDSPGHVDFSSEVTAALR+TDGALVVVD IEGVCVQTETVLRQALGERIRPV+ VNK+DR  LELQ+  EE YQ F +V+E+ NV+++TY D +LG  QV+P+KGTV
Sbjct:    1 MVAFTPEEVRNLMGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKSTAISLFAEMTDDDMKDMKEPADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETVLRQALGERIRPVVVVNKVDRALLELQISQEELYQNFARVVESVNVVISTYYDKVLGDCQVFPDKGTV 209
[Close]
BLAST of FC925777 vs. ExPASy Swiss-Prot
Match: EF2_SACKL (Elongation factor 2 OS=Saccharomyces kluyveri GN=EFT2 PE=3 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 9.282e-78
Identity = 145/209 (69.38%), Postives = 172/209 (82.30%), Query Frame = 1 
Query:   28 MVKFTAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGHVQVYPEKGTV 654
            MV FT +++R +MD   NIRNMSVIAHVDHGKSTLTDSLV  AGII+   AG+ R TDTR+DE ERGITIKST ISL+ EM+D  +K  K + +GN +LINLIDSPGHVDFSSEVTAALR+TDGALVVVD +EGVCVQTETVLRQALGERI+PV+ VNK+DR  LELQV  E+ YQ+F + +E+ NVI++TY D +LG VQVYP KGT+
Sbjct:    1 MVAFTVDQIRSLMDKVTNIRNMSVIAHVDHGKSTLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGITIKSTAISLFSEMSDDDVKDIKQKTEGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTVEGVCVQTETVLRQALGERIKPVVCVNKVDRALLELQVSKEDLYQSFARTVESVNVIISTYADEVLGDVQVYPSKGTI 209
[Close]
BLAST of FC925777 vs. ExPASy Swiss-Prot
Match: EF2_PICGU (Elongation factor 2 OS=Pichia guilliermondii GN=EFT2 PE=3 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 9.282e-78
Identity = 147/209 (70.33%), Postives = 168/209 (80.38%), Query Frame = 1 
Query:   28 MVKFTAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGHVQVYPEKGTV 654
            MV FT E++R +MD   N+RNMSVIAHVDHGKSTLTDSLV  AGII+   AG+ R  DTR+DE ERGITIKST ISLY  M D  +K  K +  GN +LINLIDSPGHVDFSSEVTAALR+TDGALVVVD +EGVCVQTETVLRQALGERI+PVL VNK+DR  LELQV  E+ YQTF + +E+ NVI++TY DP LG  QVYP+KGTV
Sbjct:    1 MVAFTIEQIRDLMDKVANVRNMSVIAHVDHGKSTLTDSLVQRAGIISAGKAGEARFMDTRKDEQERGITIKSTAISLYASMDDDDVKEIKQKTDGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTVEGVCVQTETVLRQALGERIKPVLVVNKVDRALLELQVSKEDLYQTFARTVESVNVIISTYVDPALGDAQVYPDKGTV 209
[Close]
BLAST of FC925777 vs. ExPASy Swiss-Prot
Match: EF2_ASHGO (Elongation factor 2 OS=Ashbya gossypii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 9.282e-78
Identity = 143/209 (68.42%), Postives = 173/209 (82.78%), Query Frame = 1 
Query:   28 MVKFTAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGHVQVYPEKGTV 654
            MV FT +++R +MD   N+RNMSVIAHVDHGKSTLTDSLV  AGII+   AG+ R TDTR+DE ERGITIKST ISL+ EM++  +K  K + +GN +LINLIDSPGHVDFSSEVTAALR+TDGALVVVD +EGVCVQTETVLRQALGERI+PV+ +NK+DR  LELQV  E+ YQ+F + +E+ NVI++TY D +LG VQVYP+KGTV
Sbjct:    1 MVAFTVDQIRSLMDKVTNVRNMSVIAHVDHGKSTLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGITIKSTAISLFSEMSEEDVKDIKQKTEGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTVEGVCVQTETVLRQALGERIKPVVVINKVDRALLELQVSKEDLYQSFSRTVESVNVIISTYADEVLGDVQVYPQKGTV 209
[Close]
BLAST of FC925777 vs. ExPASy Swiss-Prot
Match: EF2_DEBHA (Elongation factor 2 OS=Debaryomyces hansenii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 1.583e-77
Identity = 146/209 (69.86%), Postives = 169/209 (80.86%), Query Frame = 1 
Query:   28 MVKFTAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGHVQVYPEKGTV 654
            MV FT E++R +MD   N+RNMSVIAHVDHGKSTLTDSLV  AGII+   AG+ R TDTR+DE ERGITIKST ISLY  MTD   K  + +  GN +LINLIDSPGHVDFSSEVTAALR+TDGALVVVDC+EGVCVQTETVLRQALGERI+PV+ +NK+DR  LELQV  E+ YQ+F + IE+ NVI++TY D  LG  QVYP+KGTV
Sbjct:    1 MVAFTIEQIRELMDKVTNVRNMSVIAHVDHGKSTLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGITIKSTAISLYASMTDDDCKEIQQKTVGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCVQTETVLRQALGERIKPVVIINKVDRALLELQVTKEDLYQSFSRTIESVNVIISTYVDSSLGDSQVYPDKGTV 209
The following BLAST results are available for this feature:
BLAST of FC925777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF2_BETVU1.623e-10693.78Elongation factor 2 OS=Beta vulgaris PE=2 SV=1[more]
EF2_CHLKE3.286e-9180.38Elongation factor 2 OS=Chlorella kessleri PE=2 SV=... [more]
EF2_YEAST3.190e-7869.86Elongation factor 2 OS=Saccharomyces cerevisiae GN... [more]
EF2_PICPA4.166e-7868.90Elongation factor 2 OS=Pichia pastoris GN=EFT1 PE=... [more]
EF2_CANAL5.442e-7869.38Elongation factor 2 OS=Candida albicans GN=EFT2 PE... [more]
EF2_SCHPO9.282e-7869.38Elongation factor 2 OS=Schizosaccharomyces pombe G... [more]
EF2_SACKL9.282e-7869.38Elongation factor 2 OS=Saccharomyces kluyveri GN=E... [more]
EF2_PICGU9.282e-7870.33Elongation factor 2 OS=Pichia guilliermondii GN=EF... [more]
EF2_ASHGO9.282e-7868.42Elongation factor 2 OS=Ashbya gossypii GN=EFT1 PE=... [more]
EF2_DEBHA1.583e-7769.86Elongation factor 2 OS=Debaryomyces hansenii GN=EF... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YK14FM1 TF Citrus clementina cDNA clone KN0AAP11YK14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925777 ID=FC925777; Name=FC925777; organism=Citrus clementina; type=EST; length=654bp
GTTGGTAATATTTGAGAATCAGTCAAGATGGTGAAGTTCACAGCAGAAGA
GCTCCGGCGTATTATGGACTTCCCACATAACATCCGCAATATGTCTGTTA
TTGCCCATGTTGATCATGGGAAGTCAACCCTTACCGACTCTCTTGTGGCT
GCTGCTGGTATTATCGCCCAAGAAGTTGCTGGCGATGTCCGTATGACAGA
TACTCGTCAGGATGAAGCTGAGCGTGGTATTACAATCAAGTCTACTGGTA
TATCTCTCTACTACGAGATGACTGATGCGGCTTTGAAGAGCTTCAAGGGA
GAGCGTCAAGGGAATGAATACCTCATCAACCTTATTGATTCCCCTGGGCA
CGTCGATTTCTCATCTGAGGTTACAGCTGCCCTTCGTATCACTGATGGTG
CACTTGTGGTCGTAGACTGCATTGAAGGTGTTTGTGTCCAAACAGAAACT
GTGCTTAGACAAGCCCTGGGTGAAAGGATTAGGCCAGTCTTGACTGTGAA
CAAGATGGACAGGTGCTTCCTTGAGCTTCAGGTTGACGGTGAAGAGGCTT
ACCAGACTTTCCAGAAAGTGATTGAGAATGCTAATGTCATTATGGCTACC
TATGAAGATCCCCTCCTTGGCCATGTTCAGGTTTACCCTGAAAAGGGAAC
AGTT
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