FC925778
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925778 vs. ExPASy Swiss-Prot
Match: GRP8_ARATH (Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana GN=GRP8 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.665e-17 Identity = 39/80 (48.75%), Postives = 57/80 (71.25%), Query Frame = 2 Query: 5 FVGWLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 244 FVG L+W + L+ F +FG +I+ +I+ +R+SGR RGFGF+T+ D +AM DAI EM+G+E RVI+VN+AQ + G Sbjct: 9 FVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQSRGSG 88
BLAST of FC925778 vs. ExPASy Swiss-Prot
Match: GRP10_BRANA (Glycine-rich RNA-binding protein 10 OS=Brassica napus GN=GRP10 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.705e-17 Identity = 38/80 (47.50%), Postives = 59/80 (73.75%), Query Frame = 2 Query: 5 FVGWLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 244 FVG L+W + +LE F +FG++I+ +I+ +R++GR RGFGF+T+ D ++M DAI EM+G+E R I+VN+AQ + GG Sbjct: 9 FVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMNGKELDGRTITVNEAQSRGGG 88
BLAST of FC925778 vs. ExPASy Swiss-Prot
Match: GRP2_SINAL (Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.643e-16 Identity = 37/80 (46.25%), Postives = 58/80 (72.50%), Query Frame = 2 Query: 5 FVGWLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 244 FVG L+W ER LE AF +FG++++ +I+ +R++GR RGFGF+T+ D ++M DAI M+G++ R I+VN+AQ + G Sbjct: 11 FVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQSRGSG 90
BLAST of FC925778 vs. ExPASy Swiss-Prot
Match: GRP7_ARATH (Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana GN=GRP7 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.642e-15 Identity = 38/85 (44.71%), Postives = 58/85 (68.24%), Query Frame = 2 Query: 5 FVGWLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGGEVSDH 259 FVG L+W +R LE AF ++G +I+ +I+ +R++GR RGFGF+T+ D +AM DAI M+G++ R I+VN+AQ + G H Sbjct: 11 FVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQSRGSGGGGGH 95
BLAST of FC925778 vs. ExPASy Swiss-Prot
Match: GRPA_MAIZE (Glycine-rich RNA-binding, abscisic acid-inducible protein OS=Zea mays GN=RAB15 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.144e-15 Identity = 36/80 (45.00%), Postives = 57/80 (71.25%), Query Frame = 2 Query: 5 FVGWLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 244 FVG L+W + LENAF +G+I++ +++ +R++GR RGFGF+T++ +M DAI M+G+E R I+VN+AQ + GG Sbjct: 11 FVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQAQSRGGG 90
BLAST of FC925778 vs. ExPASy Swiss-Prot
Match: GRP2_SORBI (Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor GN=GRP2 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.657e-15 Identity = 36/80 (45.00%), Postives = 56/80 (70.00%), Query Frame = 2 Query: 5 FVGWLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 244 FVG L+W LE AF FG++I+ +++ +R++GR RGFGF+T++ ++M DAI M+G+E R I+VN+AQ + GG Sbjct: 11 FVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMNGKELDGRNITVNQAQSRGGG 90
BLAST of FC925778 vs. ExPASy Swiss-Prot
Match: GRP1_SINAL (Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.657e-15 Identity = 35/80 (43.75%), Postives = 58/80 (72.50%), Query Frame = 2 Query: 5 FVGWLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 244 FVG L+W +R LE AF ++G++++ +I+ +R++GR RGFGF+T+ D ++M DAI M+G++ R I+VN+AQ + G Sbjct: 11 FVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQSRGSG 90
BLAST of FC925778 vs. ExPASy Swiss-Prot
Match: GRP1_DAUCA (Glycine-rich RNA-binding protein OS=Daucus carota PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.148e-15 Identity = 37/80 (46.25%), Postives = 55/80 (68.75%), Query Frame = 2 Query: 5 FVGWLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPKMGG 244 FVG L+W + LE AF +FG I + +I+ +R++GR RGFGF+T+ D ++M DAI M+G+E R I+VN+AQ + G Sbjct: 9 FVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMNGQELDGRNITVNEAQSRGSG 88
BLAST of FC925778 vs. ExPASy Swiss-Prot
Match: GRP_HORVU (Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare GN=blt801 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.897e-14 Identity = 34/77 (44.16%), Postives = 54/77 (70.13%), Query Frame = 2 Query: 5 FVGWLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 235 FVG L W ++ L+NAF ++G +I+ +I+ +R++GR RGFGF+T+A AM AI M+G++ R I+VN+AQ + Sbjct: 9 FVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDGRNITVNEAQSR 85
BLAST of FC925778 vs. ExPASy Swiss-Prot
Match: GRP2_ARATH (Glycine-rich RNA-binding protein 2, mitochondrial OS=Arabidopsis thaliana GN=GRP2 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.898e-12 Identity = 31/78 (39.74%), Postives = 49/78 (62.82%), Query Frame = 2 Query: 2 IFVGWLSWNVTERQLENAFDRFGKIIECQIMLERDSGRPRGFGFITYADRRAMDDAIREMHGREFGDRVISVNKAQPK 235 +F+G LSW + L +AF FG +++ +++++R++GR RGFGF+ + D A AI EM G+E R I VN A + Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDR 114 The following BLAST results are available for this feature:
BLAST of FC925778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925778 ID=FC925778; Name=FC925778; organism=Citrus clementina; type=EST; length=743bpback to top |