FC925779

Overview
NameFC925779
Unique NameFC925779
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length637
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC925779 vs. ExPASy Swiss-Prot
Match: TIM23_SCHPO (Mitochondrial import inner membrane translocase subunit tim23 OS=Schizosaccharomyces pombe GN=tim23 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.349e-12
Identity = 47/151 (31.13%), Postives = 74/151 (49.01%), Query Frame = 2 
Query:   83 SDHERDPETRLYNPYAELNLPAQNLYKLPTNPEFLFSEESIHQRRSWGENLTFYTGTAYLAGSVSGAAIGLFSAFKSMEKGDTLKLKINRVLNSSGHSGRSWGNRVGVIGLIYAGMESGVVAATDRDDVWSSVAAGLGTGAVCRAARGIRS 535
            S  E DP     +P A+L+ P   L         L  +      R W ++L + TGT+YL+G   G   GL    K  +   + +L++N +LN     G   GN +GV+ L+Y G+ S +     +    +SVAAG  TGA+ ++ RG+R+
Sbjct:   35 SGSEFDPAK--LHPLADLDKPLDYLLIEEDALSTLPGDSMAIPSRGWQDDLCYGTGTSYLSGLAIGGLWGLNEGMKKTKDITSTRLRLNGILNGVTRRGPFVGNSLGVLALVYNGINSLIGYKRQKHGWENSVAAGALTGALYKSTRGLRA 183
The following BLAST results are available for this feature:
BLAST of FC925779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TIM23_SCHPO8.349e-1231.13Mitochondrial import inner membrane translocase su... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP3YO05FM1 TF Citrus clementina cDNA clone KN0AAP3YO05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925779 ID=FC925779; Name=FC925779; organism=Citrus clementina; type=EST; length=637bp
CGCAAGCCCTAACTTTTGAAGAAAAAAAAAAAAAGGAAAAAAAAGTTTTC
GGAAAGGAATGTCACGCCACACGCCCGTCGGATCCGACCACGAGCGCGAC
CCGGAAACCCGTCTCTACAACCCGTACGCCGAGCTGAACCTACCAGCCCA
GAATCTCTACAAGCTCCCAACCAACCCCGAGTTCCTCTTCTCCGAAGAAT
CCATCCACCAGCGGCGATCCTGGGGCGAAAATCTCACCTTTTACACCGGC
ACGGCCTACCTAGCCGGCTCCGTATCCGGCGCCGCCATCGGCCTGTTCTC
TGCATTCAAGTCCATGGAGAAAGGGGATACCCTTAAGTTGAAAATCAATA
GGGTTTTGAACTCGTCGGGACATTCGGGTCGATCGTGGGGGAACCGGGTC
GGCGTGATTGGGTTGATTTACGCGGGGATGGAGAGTGGGGTTGTGGCGGC
TACGGATCGGGATGATGTCTGGAGCAGCGTGGCGGCGGGGCTGGGCACTG
GGGCGGTGTGTCGGGCCGCGAGAGGAATAAGGTCGGCGGCTGTTGCAGGG
GCGATTGGTGGATTGGCGGCAGGTGCCGCTGTTGCGGCAAAACCGGCTGT
GAAAAGATATGTGCCTATTCGAGAGAGATCTGTGCCA
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