FC925790
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925790 vs. ExPASy Swiss-Prot
Match: RL8_SOLLC (60S ribosomal protein L8 OS=Solanum lycopersicum GN=RPL8 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.010e-31 Identity = 58/63 (92.06%), Postives = 62/63 (98.41%), Query Frame = 3 Query: 3 EKPLFRAGNAYHKFRVKRNCWPKVRGVALNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 191 EKP+ +AGNAYHK+RVKRNCWPKVRGVA+NPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI Sbjct: 176 EKPMLKAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
BLAST of FC925790 vs. ExPASy Swiss-Prot
Match: RL83_ARATH (60S ribosomal protein L8-3 OS=Arabidopsis thaliana GN=RPL8C PE=2 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 2.937e-31 Identity = 57/63 (90.48%), Postives = 62/63 (98.41%), Query Frame = 3 Query: 3 EKPLFRAGNAYHKFRVKRNCWPKVRGVALNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 191 EKP+ +AGNAYHK+RVKRNCWPKVRGVA+NPVEHPHGGGNHQHIGHASTVRRDAPPG+KVGLI Sbjct: 176 EKPMLKAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGKKVGLI 238
BLAST of FC925790 vs. ExPASy Swiss-Prot
Match: RL8_TOBAC (60S ribosomal protein L8 OS=Nicotiana tabacum GN=RPL8 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 5.010e-31 Identity = 57/63 (90.48%), Postives = 61/63 (96.83%), Query Frame = 3 Query: 3 EKPLFRAGNAYHKFRVKRNCWPKVRGVALNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 191 EKP+ +AGNAYHK+RVKRNCWPKVRGVA+NPVEHPHGGGNHQHIGHASTV RDAPPGQKVGLI Sbjct: 176 EKPMLKAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVARDAPPGQKVGLI 238
BLAST of FC925790 vs. ExPASy Swiss-Prot
Match: RL81_ARATH (60S ribosomal protein L8-1 OS=Arabidopsis thaliana GN=RPL8A PE=2 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 1.458e-30 Identity = 57/63 (90.48%), Postives = 61/63 (96.83%), Query Frame = 3 Query: 3 EKPLFRAGNAYHKFRVKRNCWPKVRGVALNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 191 EKP+ +AGNAYHK+RVKRN WPKVRGVA+NPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI Sbjct: 176 EKPMLKAGNAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
BLAST of FC925790 vs. ExPASy Swiss-Prot
Match: RL8_ANOGA (60S ribosomal protein L8 OS=Anopheles gambiae GN=RpL8 PE=2 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 3.361e-27 Identity = 50/63 (79.37%), Postives = 58/63 (92.06%), Query Frame = 3 Query: 3 EKPLFRAGNAYHKFRVKRNCWPKVRGVALNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 191 +KP+ +AG AYHK++VKRNCWPKVRGVA+NPVEHPHGGGNHQHIG ASTV+R PPG+KVGLI Sbjct: 176 DKPILKAGRAYHKYKVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTPPGRKVGLI 238
BLAST of FC925790 vs. ExPASy Swiss-Prot
Match: RL8_AEDAL (60S ribosomal protein L8 OS=Aedes albopictus GN=RpL8 PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.845e-26 Identity = 49/63 (77.78%), Postives = 57/63 (90.48%), Query Frame = 3 Query: 3 EKPLFRAGNAYHKFRVKRNCWPKVRGVALNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 191 +KP+ +AG AY K++VKRNCWPKVRGVA+NPVEHPHGGGNHQHIG ASTV+R PPG+KVGLI Sbjct: 176 DKPILKAGRAYRKYKVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTPPGRKVGLI 238
BLAST of FC925790 vs. ExPASy Swiss-Prot
Match: RL82_ARATH (60S ribosomal protein L8-2 OS=Arabidopsis thaliana GN=RPL8B PE=2 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 4.853e-26 Identity = 50/63 (79.37%), Postives = 54/63 (85.71%), Query Frame = 3 Query: 3 EKPLFRAGNAYHKFRVKRNCWPKVRGVALNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 191 EKP +AGNAYHK++ KRNCWP VRGVA+NPVEHPHGGGNHQHIGHASTVRRD G KVG I Sbjct: 177 EKPFLKAGNAYHKYKAKRNCWPVVRGVAMNPVEHPHGGGNHQHIGHASTVRRDKSAGAKVGQI 239
BLAST of FC925790 vs. ExPASy Swiss-Prot
Match: RL2_SCHPO (60S ribosomal protein L2 OS=Schizosaccharomyces pombe GN=rpl2a PE=2 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 1.081e-25 Identity = 46/63 (73.02%), Postives = 57/63 (90.48%), Query Frame = 3 Query: 3 EKPLFRAGNAYHKFRVKRNCWPKVRGVALNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 191 +KPL +AG A+HK+RVKRNCWP+ RGVA+NPV+HPHGGGNHQH+GH++TV R + PGQKVGLI Sbjct: 175 DKPLLKAGRAFHKYRVKRNCWPRTRGVAMNPVDHPHGGGNHQHVGHSTTVPRQSAPGQKVGLI 237
BLAST of FC925790 vs. ExPASy Swiss-Prot
Match: RL8_XENTR (60S ribosomal protein L8 OS=Xenopus tropicalis GN=rpl8 PE=2 SV=3) HSP 1 Score: 114.005 bits (284), Expect = 2.409e-25 Identity = 47/63 (74.60%), Postives = 56/63 (88.89%), Query Frame = 3 Query: 3 EKPLFRAGNAYHKFRVKRNCWPKVRGVALNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 191 +KP+ +AG AYHK++ KRNCWP+VRGVA+NPVEHP GGGNHQHIG ST+RRDAP G+KVGLI Sbjct: 176 DKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 238
BLAST of FC925790 vs. ExPASy Swiss-Prot
Match: RL8_XENLA (60S ribosomal protein L8 OS=Xenopus laevis GN=rpl8 PE=2 SV=3) HSP 1 Score: 114.005 bits (284), Expect = 2.409e-25 Identity = 47/63 (74.60%), Postives = 56/63 (88.89%), Query Frame = 3 Query: 3 EKPLFRAGNAYHKFRVKRNCWPKVRGVALNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 191 +KP+ +AG AYHK++ KRNCWP+VRGVA+NPVEHP GGGNHQHIG ST+RRDAP G+KVGLI Sbjct: 176 DKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 238 The following BLAST results are available for this feature:
BLAST of FC925790 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925790 ID=FC925790; Name=FC925790; organism=Citrus clementina; type=EST; length=360bpback to top |