FC925793

Overview
NameFC925793
Unique NameFC925793
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length585
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925793 vs. ExPASy Swiss-Prot
Match: PRX2B_ARATH (Peroxiredoxin-2B OS=Arabidopsis thaliana GN=PRXIIB PE=1 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 7.069e-73
Identity = 133/162 (82.10%), Postives = 145/162 (89.51%), Query Frame = 3
Query:   42 MAPIAVGDPLPDGILFYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKIFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILKAL 527
            MAPIAVGD +PDG + +FDE DQLQ  SVHSLAAGKKVILFGVPGAFTPTCS+KHVPGFIEKA+ELKSK VDEI+C SVNDPFVMKAW K +PENK VKF+ADGS +YTH LGLELDL +KGLG RSRRFALL+DDLKV  ANVESGG+FTVSSADDILKAL
Sbjct:    1 MAPIAVGDVVPDGTISFFDENDQLQTASVHSLAAGKKVILFGVPGAFTPTCSMKHVPGFIEKAEELKSKGVDEIICFSVNDPFVMKAWGKTYPENKHVKFVADGSGEYTHLLGLELDLKDKGLGVRSRRFALLLDDLKVTVANVESGGEFTVSSADDILKAL 162          
BLAST of FC925793 vs. ExPASy Swiss-Prot
Match: PRX2C_ARATH (Peroxiredoxin-2C OS=Arabidopsis thaliana GN=PRXIIC PE=1 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 5.601e-70
Identity = 127/162 (78.40%), Postives = 143/162 (88.27%), Query Frame = 3
Query:   42 MAPIAVGDPLPDGILFYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKIFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILKAL 527
            MAPI VGD +PDG + +FDE DQLQ VSVHS+AAGKKVILFGVPGAFTPTCS+ HVPGFI KA+ELKSK +DEI+C SVNDPFVMKAW K +PENK VKF+ADGS +YTH LGLELDL +KGLG RSRRFALL+D+LKV  ANVESGG+FTVSSA+DILKAL
Sbjct:    1 MAPITVGDVVPDGTISFFDENDQLQTVSVHSIAAGKKVILFGVPGAFTPTCSMSHVPGFIGKAEELKSKGIDEIICFSVNDPFVMKAWGKTYPENKHVKFVADGSGEYTHLLGLELDLKDKGLGIRSRRFALLLDNLKVTVANVESGGEFTVSSAEDILKAL 162          
BLAST of FC925793 vs. ExPASy Swiss-Prot
Match: PRX2D_ARATH (Peroxiredoxin-2D OS=Arabidopsis thaliana GN=PRXIID PE=1 SV=2)

HSP 1 Score: 259.225 bits (661), Expect = 1.056e-68
Identity = 125/162 (77.16%), Postives = 142/162 (87.65%), Query Frame = 3
Query:   42 MAPIAVGDPLPDGILFYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKIFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILKAL 527
            MAPI VGD +PDG + +FDE DQLQ VSVHS+AAGKKVILFGVPGAFTPTCS+ HVPGFI KA+ELKSK +DEI+C SVNDPFVMKAW K + ENK VKF+ADGS +YTH LGLELDL +KGLG RSRRFALL+D+LKV  ANVE+GG+FTVSSA+DILKAL
Sbjct:    1 MAPITVGDVVPDGTISFFDENDQLQTVSVHSIAAGKKVILFGVPGAFTPTCSMSHVPGFIGKAEELKSKGIDEIICFSVNDPFVMKAWGKTYQENKHVKFVADGSGEYTHLLGLELDLKDKGLGIRSRRFALLLDNLKVTVANVENGGEFTVSSAEDILKAL 162          
BLAST of FC925793 vs. ExPASy Swiss-Prot
Match: PRX2C_ORYSJ (Peroxiredoxin-2C OS=Oryza sativa subsp. japonica GN=PRXIIC PE=1 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 8.370e-66
Identity = 122/162 (75.31%), Postives = 140/162 (86.42%), Query Frame = 3
Query:   42 MAPIAVGDPLPDGILFYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKIFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILKAL 527
            MAP+AVGD LPDG L +FD +D+LQQVSVH LAAGKKV+LFGVPGAFTPTCS +HVPGFI +A++LK+K VD+IL +SVNDPFVMKAWAK +PENK VKFLADG   YT ALGLELDLSEKGLG RSRRFALL D+LKV  AN+E GG FT+S A++ILKAL
Sbjct:    1 MAPVAVGDTLPDGQLGWFDGEDKLQQVSVHGLAAGKKVVLFGVPGAFTPTCSNQHVPGFINQAEQLKAKGVDDILLVSVNDPFVMKAWAKSYPENKHVKFLADGLGTYTKALGLELDLSEKGLGIRSRRFALLADNLKVTVANIEEGGQFTISGAEEILKAL 162          
BLAST of FC925793 vs. ExPASy Swiss-Prot
Match: PRX2A_ARATH (Peroxiredoxin-2A OS=Arabidopsis thaliana GN=PRXIIA PE=1 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 3.195e-49
Identity = 99/149 (66.44%), Postives = 118/149 (79.19%), Query Frame = 3
Query:   42 MAPIAVGDPLPDGILFYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKIFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESGGD 488
            MAPI VGD +PDG + +FD+ DQLQ VSVHSLAAGKKVILFGVPGAF PTCS+ HV GFIEKA+ELKS  VDEI+C+S +DPF++ A +    ENK VKF+ DGS +Y   LGLEL++ +KGLG RSR FALL+D+LKV   NV SGGD
Sbjct:    1 MAPIDVGDFVPDGSISFFDDDDQLQTVSVHSLAAGKKVILFGVPGAFPPTCSMNHVNGFIEKAEELKSNGVDEIICLSGDDPFMITACS----ENKHVKFVEDGSGEYIQLLGLELEVKDKGLGVRSRGFALLLDNLKVIVVNVGSGGD 145          
BLAST of FC925793 vs. ExPASy Swiss-Prot
Match: PR2E1_ORYSJ (Peroxiredoxin-2E-1, chloroplastic OS=Oryza sativa subsp. japonica GN=PRXIIE-1 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.484e-46
Identity = 95/164 (57.93%), Postives = 119/164 (72.56%), Query Frame = 3
Query:   45 APIAVGDPLPDGILFYFDEQD-QLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKIFPENKSVKFLADGSAKYTHALGLELDLSEK--GLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILKAL 527
            A IAVGD LPD  L YFD  D +L+ V+V  L AGKKV+LF VPGAFTPTC+ KHVPGF+ KA EL++K VD + C+SVND FVM+AW +       V  L+DG+ +   A+G+ELDLS+K  GLG RSRR+ALL +D  VK  N+E GG FT SSA+++LKAL
Sbjct:   69 ATIAVGDKLPDATLSYFDSPDGELKTVTVRDLTAGKKVVLFAVPGAFTPTCTQKHVPGFVAKAGELRAKGVDAVACVSVNDAFVMRAWKESLGVGDEVLLLSDGNGELARAMGVELDLSDKPAGLGVRSRRYALLAEDGVVKVLNLEEGGAFTTSSAEEMLKAL 232          
BLAST of FC925793 vs. ExPASy Swiss-Prot
Match: PRX2E_ARATH (Peroxiredoxin-2E, chloroplastic OS=Arabidopsis thaliana GN=PRXIIE PE=1 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 4.318e-46
Identity = 98/164 (59.76%), Postives = 117/164 (71.34%), Query Frame = 3
Query:   45 APIAVGDPLPDGILFYFDEQD-QLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKIFPENKSVKFLADGSAKYTHALGLELDLSEK--GLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILKAL 527
            A I+VGD LPD  L Y D     ++ V+V SL AGKK ILF VPGAFTPTCS KHVPGF+ KA EL+SK +D I CISVND FVM+AW K    N  V  L+DG+ ++T  LG+ELDL +K  GLG RSRR+A+L DD  VK  N+E GG FT SSA+D+LKAL
Sbjct:   71 ASISVGDKLPDSTLSYLDPSTGDVKTVTVSSLTAGKKTILFAVPGAFTPTCSQKHVPGFVSKAGELRSKGIDVIACISVNDAFVMEAWRKDLGINDEVMLLSDGNGEFTGKLGVELDLRDKPVGLGVRSRRYAILADDGVVKVLNLEEGGAFTNSSAEDMLKAL 234          
BLAST of FC925793 vs. ExPASy Swiss-Prot
Match: PR2E2_ORYSJ (Peroxiredoxin-2E-2, chloroplastic OS=Oryza sativa subsp. japonica GN=PRXIIE-2 PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 9.621e-46
Identity = 98/166 (59.04%), Postives = 122/166 (73.49%), Query Frame = 3
Query:   42 MAPIAVGDPLPDGILFYFDEQD-QLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAK-IFPENKSVKFLADGSAKYTHALGLELDLSEK--GLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILKAL 527
            +A IAVGD LPD  L YFD  D +L+ V+V  L AG+K +LF VPGAFTPTCS KH+PGFIEKA EL +K VD I C+SVND FVM+AW + +   +  V  L+DG+ + T ALG+E+DLS+K  GLG RSRR+ALL DD  VK  N+E GG FT SSA+++LKAL
Sbjct:   60 VATIAVGDKLPDATLSYFDPADGELKTVTVAELTAGRKAVLFAVPGAFTPTCSQKHLPGFIEKAGELHAKGVDAIACVSVNDAFVMRAWKESLGLGDADVLLLSDGNLELTRALGVEMDLSDKPMGLGVRSRRYALLADDGVVKVLNLEEGGAFTTSSAEEMLKAL 225          
BLAST of FC925793 vs. ExPASy Swiss-Prot
Match: MALF3_MALFU (Putative peroxiredoxin (Fragment) OS=Malassezia furfur PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.306e-26
Identity = 64/166 (38.55%), Postives = 93/166 (56.02%), Query Frame = 3
Query:   57 VGDPLPDGILFYFDEQDQLQQVSV---------HSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKIFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILKAL 527
            +G  +P+    Y     +L+   V         H    GKKV++  VPGAFTPTC+  HVP ++EK  ELKSK VDE++ IS NDPFV+ AW        ++ F  D + +++      LDLS KG+G R+ R+AL+ +DLKV+   ++  G+   SSA  +L  L
Sbjct:    2 IGSTIPNATFAYVPYSPELEDHKVCGMPTSFQSHERWKGKKVVIVAVPGAFTPTCTANHVPPYVEKIQELKSKGVDEVVVISANDPFVLSAWGITEHAKDNLTFAQDVNCEFSKHFNATLDLSSKGMGLRTARYALIANDLKVEYFGIDE-GEPKQSSAATVLSKL 166          
BLAST of FC925793 vs. ExPASy Swiss-Prot
Match: PRX2F_ORYSJ (Peroxiredoxin-2F, mitochondrial OS=Oryza sativa subsp. japonica GN=PRXIIF PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.706e-26
Identity = 58/126 (46.03%), Postives = 82/126 (65.08%), Query Frame = 3
Query:  144 GKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKIFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVE-SGGDFTVSSADDIL 518
            GKKV++FG+PGA+T  CS  HVP +    D+LK+K VD ++C+SVNDP+ +  WA+      +++F  D    +  +L LE+DLS   LG RS R++  VDD K+KA NVE +  DF VS A+ IL
Sbjct:   70 GKKVVIFGLPGAYTGVCSQAHVPSYKNNIDKLKAKGVDSVICVSVNDPYALNGWAEKLQAKDAIEFYGDFDGSFHKSLDLEVDLSAALLGRRSHRWSAFVDDGKIKAFNVEVAPSDFKVSGAEVIL 195          
The following BLAST results are available for this feature:
BLAST of FC925793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
PRX2B_ARATH7.069e-7382.10Peroxiredoxin-2B OS=Arabidopsis thaliana GN=PRXIIB... [more]
PRX2C_ARATH5.601e-7078.40Peroxiredoxin-2C OS=Arabidopsis thaliana GN=PRXIIC... [more]
PRX2D_ARATH1.056e-6877.16Peroxiredoxin-2D OS=Arabidopsis thaliana GN=PRXIID... [more]
PRX2C_ORYSJ8.370e-6675.31Peroxiredoxin-2C OS=Oryza sativa subsp. japonica G... [more]
PRX2A_ARATH3.195e-4966.44Peroxiredoxin-2A OS=Arabidopsis thaliana GN=PRXIIA... [more]
PR2E1_ORYSJ1.484e-4657.93Peroxiredoxin-2E-1, chloroplastic OS=Oryza sativa ... [more]
PRX2E_ARATH4.318e-4659.76Peroxiredoxin-2E, chloroplastic OS=Arabidopsis tha... [more]
PR2E2_ORYSJ9.621e-4659.04Peroxiredoxin-2E-2, chloroplastic OS=Oryza sativa ... [more]
MALF3_MALFU1.306e-2638.55Putative peroxiredoxin (Fragment) OS=Malassezia fu... [more]
PRX2F_ORYSJ1.706e-2646.03Peroxiredoxin-2F, mitochondrial OS=Oryza sativa su... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YO12FM1 TF Citrus clementina cDNA clone KN0AAP3YO12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925793 ID=FC925793; Name=FC925793; organism=Citrus clementina; type=EST; length=585bp
CGTGTATTTAACCTTTAGGGCGGATCAGATTCTATCTCTAAATGGCTCCT
ATCGCAGTCGGTGACCCCTTGCCGGACGGTATTCTCTTTTACTTCGACGA
ACAAGATCAGTTGCAGCAAGTGTCCGTACACTCGCTCGCTGCCGGTAAAA
AGGTCATCCTCTTTGGCGTCCCCGGTGCTTTCACTCCTACTTGCAGCTTG
AAGCATGTGCCTGGATTCATCGAGAAGGCTGATGAGTTGAAGTCAAAAGA
CGTCGATGAAATTCTCTGCATAAGCGTTAATGACCCATTTGTGATGAAGG
CATGGGCCAAAATATTTCCTGAGAACAAGAGCGTGAAGTTCCTGGCTGAT
GGCTCAGCAAAATACACCCATGCTTTGGGGCTTGAGCTTGACCTCAGTGA
GAAAGGACTTGGCACCCGGTCAAGGAGGTTTGCTCTCTTGGTTGATGACC
TCAAGGTGAAGGCCGCAAATGTTGAATCTGGTGGAGATTTCACAGTCTCC
AGTGCTGATGACATCCTCAAGGCTCTTTAAATTTGCAGTTCCATCCCAGC
TGCTTAGTGTTGGTTGAGTTATTACTTCCTTTTTG
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