FC926059

Overview
NameFC926059
Unique NameFC926059
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC926059 vs. ExPASy Swiss-Prot
Match: Y2197_ARATH (Probable protein kinase At2g41970 OS=Arabidopsis thaliana GN=At2g41970 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.792e-22
Identity = 50/105 (47.62%), Postives = 71/105 (67.62%), Query Frame = 2
Query:    2 YLAPLYFMYGKVNDKIDVYAFGVVLLELLSGRKPISNDHPKGQESLVMWAKPILSSGKVTQLLDPALGNNYDYDQMERMVLASILCIRRDPRARPQMSLVLKLLR 316
            Y AP Y M G++  K DVY+FGVVLLELL+GRKP+ +  PKGQ+SLV WA P LS  KV Q +DP L N++    + ++   + LC++ +   RP M++V+K L+
Sbjct:  247 YHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCIDPKLNNDFPPKAVAKLAAVAALCVQYEADFRPNMTIVVKALQ 351          
BLAST of FC926059 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.441e-21
Identity = 51/105 (48.57%), Postives = 71/105 (67.62%), Query Frame = 2
Query:    2 YLAPLYFMYGKVNDKIDVYAFGVVLLELLSGRKPISNDHPKGQESLVMWAKPILSSGKVTQLLDPALGNNYDYDQMERMVLASILCIRRDPRARPQMSLVLKLLR 316
            Y AP Y M G++N K DVY+FGVVLLELL+GRKP+ +  P+GQ+SLV WA P LS  KV Q +D  LG +Y    + ++   + LC++ +   RP MS+V+K L+
Sbjct:  246 YHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHRLPRGQQSLVTWATPKLSEDKVKQCVDARLGGDYPPKAVAKLAAVAALCVQYEADFRPNMSIVVKALQ 350          
BLAST of FC926059 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 5.475e-21
Identity = 50/105 (47.62%), Postives = 70/105 (66.67%), Query Frame = 2
Query:    2 YLAPLYFMYGKVNDKIDVYAFGVVLLELLSGRKPISNDHPKGQESLVMWAKPILSSGKVTQLLDPALGNNYDYDQMERMVLASILCIRRDPRARPQMSLVLKLLR 316
            Y AP Y M G+++ K DVY+FGVVLLELL+GRKP+ +  P+GQ+SLV WA P LS  KV Q +D  L  +Y    + +M   + LC++ +   RP MS+V+K L+
Sbjct:  241 YHAPEYAMTGQLSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPRLSEDKVKQCVDARLNTDYPPKAIAKMAAVAALCVQYEADFRPNMSIVVKALQ 345          
BLAST of FC926059 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.396e-16
Identity = 42/105 (40.00%), Postives = 69/105 (65.71%), Query Frame = 2
Query:    2 YLAPLYFMYGKVNDKIDVYAFGVVLLELLSGRKPISNDHPKGQ-ESLVMWAKPILSSGKVTQLLDPALGNNYDYDQMERMVLASILCIRRDPRARPQMSLVLKLL 313
            Y+AP Y MYGK + K DVY+FGV++LE++SG K  S D   G   +LV +   + S+G  ++L+DP+ G+NY   ++ R +  ++LC++ D   RP MS ++++L
Sbjct:  512 YMAPEYAMYGKFSMKSDVYSFGVLVLEIVSGMKNSSLDQMDGSISNLVTYTWRLWSNGSPSELVDPSFGDNYQTSEITRCIHIALLCVQEDANDRPTMSAIVQML 616          
BLAST of FC926059 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 4.060e-16
Identity = 39/119 (32.77%), Postives = 71/119 (59.66%), Query Frame = 2
Query:    2 YLAPLYFMYGKVNDKIDVYAFGVVLLELLSGRKPISNDHPKGQESLVM--WAKPILSSGKVTQLLDPALGNNYDYDQMERMVLASILCIRRDPRARPQMSLVLKLLRGDADVTKWARLQ 352
            ++AP Y   GK ++K DV+ +G++LLEL++G++          + +++  W K +L   K+  L+DP L  NY+  ++E+++  ++LC +  P  RP+MS V+++L GD    KW   Q
Sbjct:  471 HIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQTNYEERELEQVIQVALLCTQGSPMERPKMSEVVRMLEGDGLAEKWDEWQ 589          
BLAST of FC926059 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.303e-16
Identity = 39/119 (32.77%), Postives = 71/119 (59.66%), Query Frame = 2
Query:    2 YLAPLYFMYGKVNDKIDVYAFGVVLLELLSGRKPISNDHPKGQESLVM--WAKPILSSGKVTQLLDPALGNNYDYDQMERMVLASILCIRRDPRARPQMSLVLKLLRGDADVTKWARLQ 352
            ++AP Y   GK ++K DV+ +G++LLEL++G++          + +++  W K +L   K+  L+DP L +NY   ++E+++  ++LC +  P  RP+MS V+++L GD    KW   Q
Sbjct:  474 HIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQSNYTEAEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAEKWDEWQ 592          
BLAST of FC926059 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.543e-15
Identity = 41/105 (39.05%), Postives = 68/105 (64.76%), Query Frame = 2
Query:    2 YLAPLYFMYGKVNDKIDVYAFGVVLLELLSGRKPISNDHPKGQESLVMWAKPILSS-GKVTQLLDPALGNNYDYDQMERMVLASILCIRRDPRARPQMSLVLKLL 313
            Y AP Y   G ++ K DVY+FGVVLLELLSGR+ I  + P G+ +LV WA+P L++  ++ +++DP L   Y   +  ++ + ++ CI  D ++RP M+ ++K +
Sbjct:  246 YAAPEYLATGHLSVKSDVYSFGVVLLELLSGRRAIDKNQPVGEHNLVDWARPYLTNKRRLLRVMDPRLQGQYSLTRALKIAVLALDCISIDAKSRPTMNEIVKTM 350          
BLAST of FC926059 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.543e-15
Identity = 41/106 (38.68%), Postives = 68/106 (64.15%), Query Frame = 2
Query:    2 YLAPLYFMYGKVNDKIDVYAFGVVLLELLSGRKPISNDHPKGQESLVMWAKPILSS-GKVTQLLDPALGNNYDYDQMERMVLASILCIRRDPRARPQMSLVLKLLR 316
            Y AP Y   G +N + DVY+FGV+LLE+LSG++ + ++ P  +E+LV WA+P L+S  KV  ++D  L   Y  ++  RM   ++ C+  +P++RP M  V++ L+
Sbjct:  245 YAAPEYMSSGHLNARSDVYSFGVLLLEILSGKRALDHNRPAKEENLVDWARPYLTSKRKVLLIVDNRLDTQYLPEEAVRMASVAVQCLSFEPKSRPTMDQVVRALQ 350          
BLAST of FC926059 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.015e-15
Identity = 64/192 (33.33%), Postives = 97/192 (50.52%), Query Frame = 2
Query:    2 YLAPLYFMYGKVNDKIDVYAFGVVLLELLSGRKPISNDHPKGQ-ESLVMWAKPILSSGKVTQLLDPALGNNYDYDQMERMVLASILCIRRDPRARPQMSLVLKLLRG-----------DADVTKWARLQVNA----SEESEMLDDESCPRSNLQSHLNLALLDVEDDSFSMSSIEQSVSLEDYLLGRWSRSS 529
            Y+AP Y M G + DK DVY+FGVV LE++SG K  +N  PK +   L+ WA  +   G + +L+DP LG ++   +  RM+  ++LC    P  RP MS V+ +L G           +AD +  A ++  A    S++SE     S    N +  ++ + +D      S S   + VSL+    GR S SS
Sbjct:  837 YMAPEYAMRGYLTDKADVYSFGVVCLEIVSG-KSNTNYRPKEEFVYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLEGKIKVQPPLVKREADPSGSAAMRFKALELLSQDSE--SQVSTYARNREQDISSSSMDGPWVDSSFSEPGKDVSLQQQEEGRSSSSS 1025          
BLAST of FC926059 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.015e-15
Identity = 41/105 (39.05%), Postives = 65/105 (61.90%), Query Frame = 2
Query:    2 YLAPLYFMYGKVNDKIDVYAFGVVLLELLSGRKPISNDHPKGQESLVMWAKP-ILSSGKVTQLLDPALGNNYDYDQMERMVLASILCIRRDPRARPQMSLVLKLL 313
            Y AP Y   G +  K DVY+FGVVLLELLSGR+ +  + P G+ +LV WAKP +++  K+ +++D  L + Y  ++  ++   S+ C+  + + RP MS V+  L
Sbjct:  246 YAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAKPYLVNKRKIFRVIDNRLQDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVVSHL 350          
The following BLAST results are available for this feature:
BLAST of FC926059 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
Y2197_ARATH3.792e-2247.62Probable protein kinase At2g41970 OS=Arabidopsis t... [more]
Y2706_ARATH1.441e-2148.57Probable receptor-like protein kinase At2g47060 OS... [more]
PTI1_SOLLC5.475e-2147.62Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]
CRK20_ARATH1.396e-1640.00Putative cysteine-rich receptor-like protein kinas... [more]
SERK1_ARATH4.060e-1632.77Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
SERK2_ARATH5.303e-1632.77Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
NAK_ARATH1.543e-1539.05Probable serine/threonine-protein kinase NAK OS=Ar... [more]
BIK1_ARATH1.543e-1538.68Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
Y5343_ARATH2.015e-1533.33Probable LRR receptor-like serine/threonine-protei... [more]
APK1A_ARATH2.015e-1539.05Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP5YF11FM1 TF Citrus clementina cDNA clone KN0AAP5YF11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC926059 ID=FC926059; Name=FC926059; organism=Citrus clementina; type=EST; length=718bp
CTACCTGGCTCCCTTGTACTTCATGTATGGAAAAGTAAATGACAAGATTG
ATGTCTATGCATTTGGTGTTGTACTCCTTGAGCTTCTCTCTGGAAGGAAG
CCTATAAGCAACGATCATCCAAAAGGCCAAGAGAGCCTAGTCATGTGGGC
AAAGCCAATTCTGAGCAGTGGGAAGGTTACCCAGTTGTTAGATCCAGCCT
TGGGCAACAACTATGACTATGACCAGATGGAGAGAATGGTTTTAGCATCT
ATTCTCTGTATCAGGCGTGACCCTCGAGCTAGGCCTCAAATGAGCCTTGT
TTTGAAGCTCCTCCGAGGTGATGCTGATGTGACCAAATGGGCAAGGTTAC
AAGTTAATGCTTCAGAAGAATCTGAAATGCTGGATGATGAATCTTGCCCT
CGTTCTAATCTCCAATCCCATCTTAATCTTGCATTACTTGATGTGGAGGA
TGATTCATTCTCCATGAGCAGCATCGAGCAAAGTGTCTCATTAGAGGACT
ACTTGCTAGGAAGGTGGAGCCGCTCATCAAGCTTTGACTGACCACATTAC
TGGCTTAAATCCCAAGTACAAATCATTCACTCGATGTGATTCTTTTATAT
ATCATTTTACTTTACAGATAGGTGTTGGATGAGAGGATGTTTGATGGTGT
GCCCTCCTCCTCCCCTTAACAGCAGTCATATTATATCTATAGTTCAGATA
TGTTGGATTGTTTTTGTT
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