FC926454
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC926454 vs. ExPASy Swiss-Prot
Match: RPG1_ARATH (Protein RUPTURED POLLEN GRAIN 1 OS=Arabidopsis thaliana GN=RPG1 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 4.795e-29 Identity = 65/177 (36.72%), Postives = 106/177 (59.89%), Query Frame = 1 Query: 1 PAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYG--IVKPNSVLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVC-DVVFPGTTVLVTQIFFDRD-VQIKVSGFLSLCFSMVAYSSPLSAMKTVVVTKSVEYMPFLLSFILFINGAVWTVYAVLTK-DLFIXIPNGSG 516 PAKTFW I +++S EEF +PY++ ++N WV+YG +V +S+LV+++NG G +E+ YV ++L++ R +L + +V+ +L+T D V+ G + F++ Y +P A+ VV TKSVEYMPFLLS + F+N +WT Y+++ K D ++ NG G Sbjct: 26 PAKTFWRIFKKKSVEEFSYVPYVATVMNCMLWVFYGLPVVHKDSILVSTINGVGLVIELFYVGVYLMYCGHKKNHRRNILGFLALEVILVVAIILITLFALKGDFVKQTFVGVICDVFNIAMYGAPSLAIIKVVKTKSVEYMPFLLSLVCFVNAGIWTTYSLIFKIDYYVLASNGIG 202
BLAST of FC926454 vs. ExPASy Swiss-Prot
Match: R1AP1_DROPS (RAG1-activating protein 1 homolog OS=Drosophila pseudoobscura pseudoobscura GN=slv PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 8.779e-15 Identity = 46/164 (28.05%), Postives = 81/164 (49.39%), Query Frame = 1 Query: 25 VQRRSTEEFESIPYISKLLNAYFWVWYGIVKPNSVLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVFPGTTVLVTQIFFDRDVQIKVSGFLSLCFSMVAYSSPLSAMKTVVVTKSVEYMPFLLSFILFINGAVWTVYAVLTKDLFIXIPNGSG 516 +Q++ST + +P+I L+ FW+ YG++ +V VN G+ L +IY +I+ +F R A V V+ V ++ RD I+++G ++ +++PL+ + V+ K+ E +P L F+ W +Y +L D FI IPN G Sbjct: 32 IQKKSTGDSSGVPFICGFLSCSFWLRYGVLTEEQSIVL-VNIIGSTLFLIYTLIYYVFTVNK-RAFVRQFAFVLAVLIAVVVVYTNRLADQRDEMIRITGIFCCIVTVCFFAAPLATLLHVIRAKNSESLPLPLIATSFLVSLQWLIYGILISDSFIQIPNFLG 193
BLAST of FC926454 vs. ExPASy Swiss-Prot
Match: R1AP1_XENLA (RAG1-activating protein 1 homolog OS=Xenopus laevis GN=rag1ap1 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 7.432e-14 Identity = 45/165 (27.27%), Postives = 87/165 (52.73%), Query Frame = 1 Query: 22 IVQRRSTEEFESIPYISKLLNAYFWVWYGIVKPNSVLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVFPGTTVLVTQIFFDRDVQIKVSGFLSLCFSMVAYSSPLSAMKTVVVTKSVEYMPFLLSFILFINGAVWTVYAVLTKDLFIXIPNGSG 516 +V +RS E + +P+++ LN W +YG +K + L+ VN GA+L+ +Y+ +L+++P + VL + V+ G I D + ++ G F++ Y SPL+ + ++ +KS + + F L+ F+ + W +Y ++ DL+I +PN G Sbjct: 29 MVAQRSVENIQYLPFLTTDLNNLGWFYYGYLKGDGTLMI-VNVIGASLQSLYMGAYLLYSPERRYVGSQVLVSL-GVLLLGYCYFTLWIL-DLNSRLNQLGLFCSVFTISMYLSPLADLAQIIRSKSTKCLSFPLTVATFLTSSSWVLYGLVQSDLYITVPNFPG 190
BLAST of FC926454 vs. ExPASy Swiss-Prot
Match: R1AP1_MOUSE (RAG1-activating protein 1 OS=Mus musculus GN=Rag1ap1 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 7.432e-14 Identity = 45/168 (26.79%), Postives = 88/168 (52.38%), Query Frame = 1 Query: 19 HIVQRRSTEEFESIPYISKLLNAYFWVWYGIVKPNSVLVASVNGFGAALEIIYVIIFLIFAPPM--MRGRTAVLAGVCDVVFPGTTVLVTQIFFDRDVQIKVSGFLSLCFSMVAYSSPLSAMKTVVVTKSVEYMPFLLSFILFINGAVWTVYAVLTKDLFIXIPNGSG 516 H+ + RS + + +P+++ +N W+ YG++K + L+ VN GA L+ +Y++ +L ++P + +TA L V + + +LV D + +++ G F++ Y SPL+ + +V TKS + + F L+ A W++Y +D +I +PN G Sbjct: 32 HMQRTRSVDNIQFLPFLTTDVNNLSWLSYGVLKGDGTLII-VNSVGAVLQTLYILAYLHYSPQKHGVLLQTATLLAVLLLGYGYFWLLVP----DLEARLQQLGLFCSVFTISMYLSPLADLAKIVQTKSTQRLSFSLTIATLFCSASWSIYGFRLRDPYITVPNLPG 194
BLAST of FC926454 vs. ExPASy Swiss-Prot
Match: R1AP1_DROME (RAG1-activating protein 1 homolog OS=Drosophila melanogaster GN=slv PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 9.706e-14 Identity = 46/165 (27.88%), Postives = 82/165 (49.70%), Query Frame = 1 Query: 25 VQRRSTEEFESIPYISKLLNAYFWVWYGIVKPNSVLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLA-GVCDVVFPGTTVLVTQIFFDRDVQIKVSGFLSLCFSMVAYSSPLSAMKTVVVTKSVEYMPFLLSFILFINGAVWTVYAVLTKDLFIXIPNGSG 516 +Q++ST + +P+I L+ FW+ YG++ N + VN G+ L ++Y +I+ +F + R V G V V ++ RD I V+G + ++ +++PL+++ V+ K+ E +P L F+ W +Y +L D FI IPN G Sbjct: 33 IQKKSTGDSSGVPFICGFLSCSFWLRYGVLT-NEQSIVLVNIIGSTLFLVYTLIYYVFT---VNKRACVKQFGFVLTVLVVVIVYTNRLEDQRDRMIHVTGIVCCIVTVCFFAAPLASLLHVIRAKNSESLPLPLIATSFVVSLQWLIYGILISDSFIQIPNFLG 193
BLAST of FC926454 vs. ExPASy Swiss-Prot
Match: R1AP1_HUMAN (RAG1-activating protein 1 OS=Homo sapiens GN=RAG1AP1 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.073e-12 Identity = 44/168 (26.19%), Postives = 88/168 (52.38%), Query Frame = 1 Query: 19 HIVQRRSTEEFESIPYISKLLNAYFWVWYGIVKPNSVLVASVNGFGAALEIIYVIIFLIFAPP--MMRGRTAVLAGVCDVVFPGTTVLVTQIFFDRDVQIKVSGFLSLCFSMVAYSSPLSAMKTVVVTKSVEYMPFLLSFILFINGAVWTVYAVLTKDLFIXIPNGSG 516 H+ RS + + +P+++ +N W+ YG +K + +L+ VN GAAL+ +Y++ +L + P ++ +TA L GV + + +LV + + +++ G F++ Y SPL+ + V+ TKS + + + L+ + A W +Y +D +I + N G Sbjct: 32 HMRMTRSVDNVQFLPFLTTEVNNLGWLSYGALKGDGILIV-VNTVGAALQTLYILAYLHYCPRKRVVLLQTATLLGVLLLGYGYFWLLVP----NPEARLQQLGLFCSVFTISMYLSPLADLAKVIQTKSTQCLSYPLTIATLLTSASWCLYGFRLRDPYIMVSNFPG 194
BLAST of FC926454 vs. ExPASy Swiss-Prot
Match: R1AP1_DICDI (RAG1-activating protein 1 homolog OS=Dictyostelium discoideum GN=rag1ap1 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.402e-12 Identity = 43/171 (25.15%), Postives = 83/171 (48.54%), Query Frame = 1 Query: 1 PAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGIVKPNSVLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVFPGTTVLVT--QIFFDRDVQIKVSGFLSLCFSMVAYSSPLSAMKTVVVTKSVEYMPFLLSFILFINGAVWTVYAVLTKDLFIXIPN 507 P KT I+++++ + +IS +LN + W+ Y ++ N+ ++ VN G I YV + + R + + V T + ++ D D +I GFLS ++ ++SPL M V+ +K+ E M ++ + + G WT++ +L D++I +PN Sbjct: 28 PLKTIRLIIEKKNVGTVAGLQFISSVLNCFLWISYALLTSNTTMLF-VNSIGMMFSIYYVFNYWKNINQVRASRDYLKKVMIACVLAITIISISYYNTVDDLDTRISRLGFLSSVVCVLMFASPLEKMAIVIQSKNSEGMIINVAILSLLCGLSWTIFGLLLNDIYIYLPN 197
BLAST of FC926454 vs. ExPASy Swiss-Prot
Match: R1AP1_DANRE (RAG1-activating protein 1 homolog OS=Danio rerio GN=rag1ap1 PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 1.402e-12 Identity = 43/161 (26.71%), Postives = 78/161 (48.45%), Query Frame = 1 Query: 34 RSTEEFESIPYISKLLNAYFWVWYGIVKPNSVLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVFPGTTVLVTQIFFDRDVQIKVSGFLSLCFSMVAYSSPLSAMKTVVVTKSVEYMPFLLSFILFINGAVWTVYAVLTKDLFIXIPNGSG 516 +S + + +P+++ LN W++YG++K + ++ VN GA L+ +Y+ + + R T L V V V + + + Q+ G F++ Y SPL+ + ++ TKSVE + F L+ F WT+Y + D +I +PN G Sbjct: 33 QSADNVQFLPFLTTCLNNLGWLYYGLLKGDGTVIF-VNIIGAFLQTVYIATYCHYTKEKRRVYTQTLLMVS--VLCVAWVYFSLVISPGEAQLSQLGLTCSVFTISMYLSPLADLLDIMRTKSVERLSFSLTVATFFTSTSWTLYGLQLGDYYIMVPNTPG 190
BLAST of FC926454 vs. ExPASy Swiss-Prot
Match: R1AP1_CAEEL (RAG1-activating protein 1 homolog OS=Caenorhabditis elegans GN=K02D7.5 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.326e-12 Identity = 37/157 (23.57%), Postives = 76/157 (48.41%), Query Frame = 1 Query: 46 EFESIPYISKLLNAYFWVWYGIVKPNSVLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVFPGTTVLVTQIFFDRDVQIKVSGFLSLCFSMVAYSSPLSAMKTVVVTKSVEYMPFLLSFILFINGAVWTVYAVLTKDLFIXIPNGSG 516 + +P++ +L FW+ YG++K + V++ VN G A Y + FLI++ P C ++ +T+ ++ + G + + F+++ + +PL+ + V+ + V +P + F+ + W +Y L D++I IPNG G Sbjct: 39 DISGVPFLMGVLGGSFWLRYGLLKMDYVMII-VNVVGVACMAFYCVFFLIYSLPKK-------TFTCQLILVTSTIGGMVLWIALKPNLDYLGVICMTFNIMNFGAPLAGLGVVLKNREVSTLPLPMCVANFLVSSQWCLYGNLVSDIYIIIPNGIG 187
BLAST of FC926454 vs. ExPASy Swiss-Prot
Match: R1AP1_XENTR (RAG1-activating protein 1 homolog OS=Xenopus tropicalis GN=rag1ap1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 9.085e-12 Identity = 41/170 (24.12%), Postives = 84/170 (49.41%), Query Frame = 1 Query: 22 IVQRRSTEEFESIPYISKLLNAYFWVWYGIVKPNSVLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVFPGTTVLVTQIFF-----DRDVQIKVSGFLSLCFSMVAYSSPLSAMKTVVVTKSVEYMPFLLSFILFINGAVWTVYAVLTKDLFIXIPNGSG 516 +V +RS E + +P+++ LN W +YG +K + L+ VN GA+L+ +Y+ +++++ + VL + + + +F D + ++ G F++ Y SPL+ + ++ +KS + + F L+ F+ W +Y + DL+I +PN G Sbjct: 29 MVAKRSVENIQFLPFLTTDLNNLGWFYYGYLKGDGTLII-VNLIGASLQTLYMAAYILYSLERRYVVSQVLVSL-------GVLFLAHCYFTLWTPDINSRLNQLGLFCSIFTISMYLSPLADLAQIIKSKSTKCLSFPLTVATFLTSTSWVLYGWVQSDLYITVPNFPG 190 The following BLAST results are available for this feature:
BLAST of FC926454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >FC926454 ID=FC926454; Name=FC926454; organism=Citrus clementina; type=EST; length=516bpback to top |