FC927404

Overview
NameFC927404
Unique NameFC927404
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length569
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC927404 vs. ExPASy Swiss-Prot
Match: M3K2_ARATH (Mitogen-activated protein kinase kinase kinase 2 OS=Arabidopsis thaliana GN=ANP2 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 5.245e-25
Identity = 70/192 (36.46%), Postives = 112/192 (58.33%), Query Frame = 2
Query:   11 KKMVSWVRGKCIGRGSFGTVNVAVDRFNGDVFAVKSVDRNAALCHHMPAIQAEC--LENEIRILRSLSSPYIVKYLGDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGE----ATVSDTRGVKIQPRGSPLWM 568
            K  + W +G+ IGRG+FGTV + ++  +G++ AVK V    + C      QA    LE E+++L++LS P IV+YLG               N+ LE++PGG++S L     A+ + + +R++T  ++  L+YLH+  I+H D+KG N+LV  N   +KLADFGA+ +    AT+S  + +K    G+P WM
Sbjct:   63 KPPIRWRKGQLIGRGAFGTVYMGMNLDSGELLAVKQV-LITSNCASKEKTQAHIQELEEEVKLLKNLSHPNIVRYLG-------TVREDETLNILLEFVPGGSISSLLEKFGAFPESV-VRTYTNQLLLGLEYLHNHAIMHRDIKGANILV-DNQGCIKLADFGASKQVAELATISGAKSMK----GTPYWM 240          
BLAST of FC927404 vs. ExPASy Swiss-Prot
Match: ANP1_ARATH (Mitogen-activated protein kinase kinase kinase ANP1 OS=Arabidopsis thaliana GN=ANP1 PE=1 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 7.574e-24
Identity = 67/185 (36.22%), Postives = 106/185 (57.30%), Query Frame = 2
Query:   20 VSWVRGKCIGRGSFGTVNVAVDRFNGDVFAVKSV--DRNAALCHHMPAIQAECLENEIRILRSLSSPYIVKYLGDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQPRGSPLWM 568
            +SW +G+ IGRG+FGTV + ++  +G++ AVK V    N A      A   E LE E+++L++LS P IV+YLG               N+ LE++PGG++S L      + + + +R++T  ++  L+YLH+  I+H D+KG N+LV  N   +KLADFGA+ +     T       +G+P WM
Sbjct:   67 ISWRKGQLIGRGAFGTVYMGMNLDSGELLAVKQVLIAANFASKEKTQAHIQE-LEEEVKLLKNLSHPNIVRYLG-------TVREDDTLNILLEFVPGGSISSLLEKFGPFPESV-VRTYTRQLLLGLEYLHNHAIMHRDIKGANILV-DNKGCIKLADFGASKQVAELATMTGAKSMKGTPYWM 241          
BLAST of FC927404 vs. ExPASy Swiss-Prot
Match: BYR2_SCHPO (Protein kinase byr2 OS=Schizosaccharomyces pombe GN=byr2 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.878e-23
Identity = 69/196 (35.20%), Postives = 109/196 (55.61%), Query Frame = 2
Query:   20 VSWVRGKCIGRGSFGTVNVAVDRFNGDVFAVKSV---------DRNAALCHHMPAIQAECLENEIRILRSLSSPYIVKYLGDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGE----ATVSDTRGVKIQPRGSPLWM 568
            + W+RG  IG GSFG V + ++  +G++ AVK V         DR+A L         + L  EI +L+ LS  +IV+YLG ++       +S   N+ LEY+PGG+V+ L T   ++ +E  +++     +  L+YLHSR IVH D+KG N+LV  N   +K++DFG + +    +T + T G +   +GS  WM
Sbjct:  392 IKWIRGALIGSGSFGQVYLGMNASSGELMAVKQVILDSVSESKDRHAKL--------LDALAGEIALLQELSHEHIVQYLGSNL-------NSDHLNIFLEYVPGGSVAGLLTMYGSF-EETLVKNFIKQTLKGLEYLHSRGIVHRDIKGANILV-DNKGKIKISDFGISKKLELNSTSTKTGGARPSFQGSSFWM 570          
BLAST of FC927404 vs. ExPASy Swiss-Prot
Match: M3K3_ARATH (Mitogen-activated protein kinase kinase kinase 3 OS=Arabidopsis thaliana GN=ANP3 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.281e-20
Identity = 60/188 (31.91%), Postives = 106/188 (56.38%), Query Frame = 2
Query:   20 VSWVRGKCIGRGSFGTVNVAVDRFNGDVFAVKSV-DRNAALCHHMPAIQAECLENEIRILRSLSSPYIVKYLGDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGE----ATVSDTRGVKIQPRGSPLWM 568
            + W +G+ IG G+FG V + ++  +G++ A+K V    ++            LE E+++L++LS P IV+YLG           S   N+ +E++PGG++S L     ++ + + +  +T  ++  L+YLH+  I+H D+KG N+LV  N   ++LADFGA+ +    ATV+  + +K    G+P WM
Sbjct:   66 IRWRKGELIGCGAFGRVYMGMNLDSGELLAIKQVLIAPSSASKEKTQGHIRELEEEVQLLKNLSHPNIVRYLGT-------VRESDSLNILMEFVPGGSISSLLEKFGSFPEPVIIM-YTKQLLLGLEYLHNNGIMHRDIKGANILV-DNKGCIRLADFGASKKVVELATVNGAKSMK----GTPYWM 240          
BLAST of FC927404 vs. ExPASy Swiss-Prot
Match: MKKA_DICDI (Mitogen-activated protein kinase kinase kinase A OS=Dictyostelium discoideum GN=mkkA PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 5.081e-20
Identity = 61/190 (32.11%), Postives = 106/190 (55.79%), Query Frame = 2
Query:   20 VSWVRGKCIGRGSFGTVNVAVDRFNGDVFAVKS---VDRNAALCHHMPAIQAECL--ENEIRILRSLSSPYIVKYLGDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAG--EATVSDTRGVKIQPRGSPLWM 568
            + W +G+ +GRG +G+V + +++  G++FAVK    VD N+      P ++   L    EI ++RSL    IV+YLG  +         S  ++ LEY+PGG++S L     A+++ + ++ +T  I+  L +LH+ +I+H D+KG N+L+      VKL+DFG +      VS  + +    +G+P WM
Sbjct:  168 IKWQKGQILGRGGYGSVYLGLNKDTGELFAVKQLEIVDINSD-----PKLKNMILSFSKEIEVMRSLRHDNIVRYLGTSL-------DQSFLSVFLEYIPGGSISSLLGKFGAFSENV-IKVYTKQILQGLSFLHANSIIHRDIKGANILI-DTKGIVKLSDFGCSKSFSGIVSQFKSM----QGTPYWM 339          
BLAST of FC927404 vs. ExPASy Swiss-Prot
Match: M3K3_MOUSE (Mitogen-activated protein kinase kinase kinase 3 OS=Mus musculus GN=Map3k3 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.755e-18
Identity = 62/184 (33.70%), Postives = 92/184 (50.00%), Query Frame = 2
Query:   20 VSWVRGKCIGRGSFGTVNVAVDRFNGDVFAVKSVDRNAALCHHMPAIQAECLENEIRILRSLSSPYIVKYLGDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQP-RGSPLWM 568
            ++W RGK +G+G+FG V +  D   G   A K V  +         + A  LE EI++L++L    IV+Y G          +     + +EY+PGG+V D      A  + +T R +T  I+  + YLHS  IVH D+KG N+L   ++  VKL DFGA+         G  I+   G+P WM
Sbjct:  360 INWRRGKLLGQGAFGRVYLCYDVDTGRELASKQVQFDPDSPETSKEVSA--LECEIQLLKNLQHERIVQYYGC-----LRDRAEKILTIFMEYMPGGSVKDQLKAYGALTESVT-RKYTRQILEGMSYLHSNMIVHRDIKGANIL-RDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWM 534          
BLAST of FC927404 vs. ExPASy Swiss-Prot
Match: M3K3_HUMAN (Mitogen-activated protein kinase kinase kinase 3 OS=Homo sapiens GN=MAP3K3 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.059e-17
Identity = 62/184 (33.70%), Postives = 93/184 (50.54%), Query Frame = 2
Query:   20 VSWVRGKCIGRGSFGTVNVAVDRFNGDVFAVKSVDRNAALCHHMPAIQAECLENEIRILRSLSSPYIVKYLGDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQP-RGSPLWM 568
            ++W RGK +G+G+FG V +  D   G   A K V  +         + A  LE EI++L++L    IV+Y G        T +     + +EY+PGG+V D      A  + +T R +T  I+  + YLHS  IVH D+KG N+L   ++  VKL DFGA+         G  ++   G+P WM
Sbjct:  360 INWRRGKLLGQGAFGRVYLCYDVDTGRELASKQVQFDPDSPETSKEVSA--LECEIQLLKNLQHERIVQYYGCLRDRAEKTLT-----IFMEYMPGGSVKDQLKAYGALTESVT-RKYTRQILEGMSYLHSNMIVHRDIKGANIL-RDSAGNVKLGDFGASKRLQTICMSGTGMRSVTGTPYWM 534          
BLAST of FC927404 vs. ExPASy Swiss-Prot
Match: M3K2_HUMAN (Mitogen-activated protein kinase kinase kinase 2 OS=Homo sapiens GN=MAP3K2 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 3.082e-17
Identity = 62/183 (33.88%), Postives = 93/183 (50.82%), Query Frame = 2
Query:   23 SWVRGKCIGRGSFGTVNVAVDRFNGDVFAVKSVDRNAALCHHMPAIQAECLENEIRILRSLSSPYIVKYLGDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQP-RGSPLWM 568
            +W  GK +G+G+FG V +  D   G   AVK V  +         + A  LE EI++L++L    IV+Y G     +  T S     + +EY+PGG++ D      A  + +T R +T  I+  + YLHS  IVH D+KG N+L   ++  VKL DFGA+         G  ++   G+P WM
Sbjct:  355 NWRLGKLLGQGAFGRVYLCYDVDTGRELAVKQVQFDPDSPETSKEVNA--LECEIQLLKNLLHERIVQYYGCLRDPQEKTLS-----IFMEYMPGGSIKDQLKAYGALTENVT-RKYTRQILEGVHYLHSNMIVHRDIKGANIL-RDSTGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWM 528          
BLAST of FC927404 vs. ExPASy Swiss-Prot
Match: M3K1_HUMAN (Mitogen-activated protein kinase kinase kinase 1 OS=Homo sapiens GN=MAP3K1 PE=1 SV=4)

HSP 1 Score: 88.1965 bits (217), Expect = 3.082e-17
Identity = 54/173 (31.21%), Postives = 87/173 (50.29%), Query Frame = 2
Query:   26 WVRGKCIGRGSFGTVNVAVDRFNGDVFAVKSVDRNAALCHHMPAIQAECLENEIRILRSLSSPYIVKYLGDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQ 544
            W++G+ IG G+F +   A D   G + AVK V            +  E L  EIR++  L+ P I++ LG        T   S  NL +E++ GG+V+ L +   A+ + + + ++T  ++  L YLH   I+H DVKG N+L+      +++ADFGAA       T   + Q
Sbjct: 1243 WLKGQQIGLGAFSSCYQAQDVGTGTLMAVKQVTYVRNTSSEQEEV-VEALREEIRMMSHLNHPNIIRMLG-------ATCEKSNYNLFIEWMAGGSVAHLLSKYGAFKESVVI-NYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLASKGTGAGEFQ 1406          
BLAST of FC927404 vs. ExPASy Swiss-Prot
Match: M3K1_MOUSE (Mitogen-activated protein kinase kinase kinase 1 OS=Mus musculus GN=Map3k1 PE=1 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 4.026e-17
Identity = 54/173 (31.21%), Postives = 87/173 (50.29%), Query Frame = 2
Query:   26 WVRGKCIGRGSFGTVNVAVDRFNGDVFAVKSVDRNAALCHHMPAIQAECLENEIRILRSLSSPYIVKYLGDDVSYEAPTTSSSCRNLHLEYLPGGTVSDLATTLNAYADEITLRSHTYCIVSALKYLHSRNIVHCDVKGKNVLVGPNSSFVKLADFGAAGEATVSDTRGVKIQ 544
            W++G+ IG G+F +   A D   G + AVK V            +  E L  EIR++  L+ P I++ LG        T   S  NL +E++ GG+V+ L +   A+ + + + ++T  ++  L YLH   I+H DVKG N+L+      +++ADFGAA       T   + Q
Sbjct: 1224 WLKGQQIGLGAFSSCYQAQDVGTGTLMAVKQVTYVRNTSSEQEEV-VEALREEIRMMGHLNHPNIIRMLG-------ATCEKSNYNLFIEWMAGGSVAHLLSKYGAFKESVVI-NYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLASKGTGAGEFQ 1387          
The following BLAST results are available for this feature:
BLAST of FC927404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
M3K2_ARATH5.245e-2536.46Mitogen-activated protein kinase kinase kinase 2 O... [more]
ANP1_ARATH7.574e-2436.22Mitogen-activated protein kinase kinase kinase ANP... [more]
BYR2_SCHPO2.878e-2335.20Protein kinase byr2 OS=Schizosaccharomyces pombe G... [more]
M3K3_ARATH2.281e-2031.91Mitogen-activated protein kinase kinase kinase 3 O... [more]
MKKA_DICDI5.081e-2032.11Mitogen-activated protein kinase kinase kinase A O... [more]
M3K3_MOUSE4.755e-1833.70Mitogen-activated protein kinase kinase kinase 3 O... [more]
M3K3_HUMAN1.059e-1733.70Mitogen-activated protein kinase kinase kinase 3 O... [more]
M3K2_HUMAN3.082e-1733.88Mitogen-activated protein kinase kinase kinase 2 O... [more]
M3K1_HUMAN3.082e-1731.21Mitogen-activated protein kinase kinase kinase 1 O... [more]
M3K1_MOUSE4.026e-1731.21Mitogen-activated protein kinase kinase kinase 1 O... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YB14FM1 TF Citrus clementina cDNA clone KN0AAP9YB14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC927404 ID=FC927404; Name=FC927404; organism=Citrus clementina; type=EST; length=569bp
CATTTATTAAAAAAAAATGGTTTCTTGGGTGAGAGGCAAGTGCATAGGCA
GAGGCTCCTTTGGAACCGTCAACGTGGCCGTCGACAGATTCAACGGCGAC
GTTTTTGCGGTGAAATCAGTTGATCGAAACGCCGCGTTGTGTCACCATAT
GCCAGCAATTCAAGCCGAGTGTTTAGAAAACGAAATCAGAATTCTCCGCT
CACTCTCCTCCCCTTACATTGTCAAGTACCTCGGCGACGACGTGTCATAC
GAGGCCCCCACGACGTCGTCCTCGTGCCGGAACCTCCACCTAGAGTACTT
GCCAGGCGGCACCGTCTCCGACCTGGCAACAACTCTTAATGCTTACGCGG
ACGAGATCACCTTGCGTTCACACACGTACTGTATTGTCTCTGCGTTGAAG
TACTTGCATTCTAGGAACATCGTACACTGCGACGTCAAAGGCAAGAACGT
ACTAGTGGGTCCCAATTCGAGTTTCGTTAAACTCGCCGATTTCGGCGCAG
CGGGTGAGGCGACGGTTTCTGACACACGGGGTGTCAAGATTCAGCCGCGT
GGAAGTCCTCTATGGATGG
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