FC927584
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC927584 vs. ExPASy Swiss-Prot
Match: RL15_PETHY (60S ribosomal protein L15 OS=Petunia hybrida GN=RPL15 PE=2 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 3.323e-77 Identity = 119/147 (80.95%), Postives = 122/147 (82.99%), Query Frame = 1
Query: 34 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPQ 474
MGAY YVSELWRKKQSDVMRFLQRVRCWEYRQ PSIVRVTRPTRPDKARRLGYKAKQ IVYGKPTNQGVTQLKFQR+KRSVAEERAGRKLGGL+VLNSYWINEDSTYKYFEVILVD AH AIRNDP+
Sbjct: 1 MGAYTYVSELWRKKQSDVMRFLQRVRCWEYRQLPSIVRVTRPTRPDKARRLGYKAKQGYVVYRVRVKRGGRKRPVPKGIVYGKPTNQGVTQLKFQRTKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDQAHAAIRNDPR 147 HSP 2 Score: 72.7886 bits (177), Expect = 3.323e-77 Identity = 31/33 (93.94%), Postives = 32/33 (96.97%), Query Frame = 2
Query: 470 PRINWICKPVHKHRELRGLTSAGKKYRGLRGKG 568
PRINWIC PVHKHRELRGLTSAGKKYRGLRG+G
Sbjct: 146 PRINWICNPVHKHRELRGLTSAGKKYRGLRGRG 178
BLAST of FC927584 vs. ExPASy Swiss-Prot
Match: RL152_ARATH (60S ribosomal protein L15-2 OS=Arabidopsis thaliana GN=RPL15B PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.630e-76 Identity = 115/147 (78.23%), Postives = 123/147 (83.67%), Query Frame = 1
Query: 34 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPQ 474
MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQ PSIVR+ RPTRPDKARRLGYKAKQ IVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGL+V+NSYW+NEDSTYKY+E+ILVD AHNA+RNDP+
Sbjct: 1 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLVRPTRPDKARRLGYKAKQGFVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYWLNEDSTYKYYEIILVDPAHNAVRNDPR 147 HSP 2 Score: 68.5514 bits (166), Expect = 3.630e-76 Identity = 30/33 (90.91%), Postives = 30/33 (90.91%), Query Frame = 2
Query: 470 PRINWICKPVHKHRELRGLTSAGKKYRGLRGKG 568
PRINWIC PVHKHRELRGLTS GKK RGLRGKG
Sbjct: 146 PRINWICNPVHKHRELRGLTSEGKKNRGLRGKG 178
BLAST of FC927584 vs. ExPASy Swiss-Prot
Match: RL151_ARATH (60S ribosomal protein L15-1 OS=Arabidopsis thaliana GN=RPL15A PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.630e-76 Identity = 115/147 (78.23%), Postives = 123/147 (83.67%), Query Frame = 1
Query: 34 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPQ 474
MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQ PSIVR+ RPTRPDKARRLGYKAKQ IVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGL+V+NSYW+NEDSTYKY+E+ILVD AHNA+RNDP+
Sbjct: 1 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLVRPTRPDKARRLGYKAKQGFVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYWLNEDSTYKYYEIILVDPAHNAVRNDPR 147 HSP 2 Score: 68.5514 bits (166), Expect = 3.630e-76 Identity = 30/33 (90.91%), Postives = 30/33 (90.91%), Query Frame = 2
Query: 470 PRINWICKPVHKHRELRGLTSAGKKYRGLRGKG 568
PRINWIC PVHKHRELRGLTS GKK RGLRGKG
Sbjct: 146 PRINWICNPVHKHRELRGLTSEGKKNRGLRGKG 178
BLAST of FC927584 vs. ExPASy Swiss-Prot
Match: RL15B_PICMA (60S ribosomal protein L15-2 OS=Picea mariana GN=SB62 PE=2 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.372e-58 Identity = 117/188 (62.23%), Postives = 133/188 (70.74%), Query Frame = 1
Query: 34 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPQDQLDL*ACPQAQGASWTHFCWEEVQRSPRKGVTLHHKARPS 597
MGAYKY+ ELW+KKQSDVMRFLQRVRCWEYRQ P IVR+T PTRPDKARRLGYKAKQ IVYGKP NQG+TQLKFQRS RSVAEERAGRKLGGL+VLNSYWIN+DSTYKY+EV+LVD AH IRNDP+ A + + ++ + +G L+HKARPS
Sbjct: 1 MGAYKYIEELWKKKQSDVMRFLQRVRCWEYRQLPGIVRITHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPKNQGITQLKFQRSLRSVAEERAGRKLGGLRVLNSYWINQDSTYKYYEVVLVDQAHTVIRNDPRINWICNAVHKHRELRGLTSAGKKYRGLRGRG-HLYHKARPS 187
BLAST of FC927584 vs. ExPASy Swiss-Prot
Match: RL15A_PICMA (60S ribosomal protein L15-1 OS=Picea mariana GN=SB61 PE=2 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 3.057e-58 Identity = 117/188 (62.23%), Postives = 135/188 (71.81%), Query Frame = 1
Query: 34 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPQDQLDL*ACPQAQGASWTHFCWEEVQRSPRKGVTLHHKARPS 597
MGAYKY+ ELW+KKQSDVMRFLQRVRCWE+RQ P IVRVTRP+RPDKARRLGYKAKQ IVYGKP NQG+TQLKFQRS RSVAEERAGRKLGGL+VLNSYWIN+DSTYKY+E+ILVD AH+AIR DP+ A + + ++ + +G L+HKARPS
Sbjct: 1 MGAYKYIEELWKKKQSDVMRFLQRVRCWEFRQLPGIVRVTRPSRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPKNQGITQLKFQRSLRSVAEERAGRKLGGLRVLNSYWINQDSTYKYYEIILVDQAHSAIRKDPRINWICNAVHKHRELRGLTSAGKKYRGLRGRG-HLYHKARPS 187
BLAST of FC927584 vs. ExPASy Swiss-Prot
Match: RL15_MYLPI (60S ribosomal protein L15 OS=Mylopharyngodon piceus GN=rpl15 PE=2 SV=3) HSP 1 Score: 192.2 bits (487), Expect = 2.930e-57 Identity = 94/149 (63.09%), Postives = 105/149 (70.47%), Query Frame = 1
Query: 34 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPQDQ 480
MGAYKY+ ELWRKKQSDVMRFL RVRCW+YRQ S+ R RPTRPDKARRLGYKAKQ YGKP + GV Q+KF RS +SVAEERAGR GGL+VLNSYW+ EDSTYK+FEVIL+D H AIR +P Q
Sbjct: 1 MGAYKYMQELWRKKQSDVMRFLLRVRCWQYRQLSSLHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLNSYWVGEDSTYKFFEVILIDTFHKAIRRNPDTQ 149 HSP 2 Score: 51.2174 bits (121), Expect = 2.930e-57 Identity = 25/33 (75.76%), Postives = 26/33 (78.79%), Query Frame = 2
Query: 470 PRINWICKPVHKHRELRGLTSAGKKYRGLRGKG 568
P WI K VHKHRE+RGLTSAGKK RGL GKG
Sbjct: 146 PDTQWITKAVHKHREMRGLTSAGKKSRGL-GKG 177
BLAST of FC927584 vs. ExPASy Swiss-Prot
Match: RL15_CTEID (60S ribosomal protein L15 OS=Ctenopharyngodon idella GN=rpl15 PE=2 SV=3) HSP 1 Score: 192.2 bits (487), Expect = 2.930e-57 Identity = 94/149 (63.09%), Postives = 105/149 (70.47%), Query Frame = 1
Query: 34 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPQDQ 480
MGAYKY+ ELWRKKQSDVMRFL RVRCW+YRQ S+ R RPTRPDKARRLGYKAKQ YGKP + GV Q+KF RS +SVAEERAGR GGL+VLNSYW+ EDSTYK+FEVIL+D H AIR +P Q
Sbjct: 1 MGAYKYMQELWRKKQSDVMRFLLRVRCWQYRQLSSLHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLNSYWVGEDSTYKFFEVILIDTFHKAIRRNPDTQ 149 HSP 2 Score: 51.2174 bits (121), Expect = 2.930e-57 Identity = 25/33 (75.76%), Postives = 26/33 (78.79%), Query Frame = 2
Query: 470 PRINWICKPVHKHRELRGLTSAGKKYRGLRGKG 568
P WI K VHKHRE+RGLTSAGKK RGL GKG
Sbjct: 146 PDTQWITKAVHKHREMRGLTSAGKKSRGL-GKG 177
BLAST of FC927584 vs. ExPASy Swiss-Prot
Match: RL15_ICTPU (60S ribosomal protein L15 OS=Ictalurus punctatus GN=rpl15 PE=2 SV=3) HSP 1 Score: 191.815 bits (486), Expect = 3.820e-57 Identity = 94/149 (63.09%), Postives = 105/149 (70.47%), Query Frame = 1
Query: 34 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPQDQ 480
MGAYKY+ ELWRKKQSDVMRFL RVRCW+YRQ ++ R RPTRPDKARRLGYKAKQ YGKP + GV QLKF RS +SVAEERAGR GGL+VLNSYW+ EDSTYK+FEVIL+D H AIR +P Q
Sbjct: 1 MGAYKYMQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGGLRVLNSYWVGEDSTYKFFEVILIDTFHKAIRRNPDTQ 149 HSP 2 Score: 51.2174 bits (121), Expect = 3.820e-57 Identity = 25/33 (75.76%), Postives = 26/33 (78.79%), Query Frame = 2
Query: 470 PRINWICKPVHKHRELRGLTSAGKKYRGLRGKG 568
P WI K VHKHRE+RGLTSAGKK RGL GKG
Sbjct: 146 PDTQWITKAVHKHREMRGLTSAGKKSRGL-GKG 177
BLAST of FC927584 vs. ExPASy Swiss-Prot
Match: RL15_RAT (60S ribosomal protein L15 OS=Rattus norvegicus GN=Rpl15 PE=1 SV=2) HSP 1 Score: 189.889 bits (481), Expect = 3.820e-57 Identity = 93/149 (62.42%), Postives = 104/149 (69.80%), Query Frame = 1
Query: 34 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPQDQ 480
MGAYKY+ ELWRKKQSDVMRFL RVRCW+YRQ ++ R RPTRPDKARRLGYKAKQ YGKP + GV QLKF RS +SVAEERAGR G L+VLNSYW+ EDSTYK+FEVIL+D H AIR +P Q
Sbjct: 1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQ 149 HSP 2 Score: 53.1434 bits (126), Expect = 3.820e-57 Identity = 25/33 (75.76%), Postives = 27/33 (81.82%), Query Frame = 2
Query: 470 PRINWICKPVHKHRELRGLTSAGKKYRGLRGKG 568
P WI KPVHKHRE+RGLTSAG+K RGL GKG
Sbjct: 146 PDTQWITKPVHKHREMRGLTSAGRKSRGL-GKG 177
BLAST of FC927584 vs. ExPASy Swiss-Prot
Match: RL15_PONAB (60S ribosomal protein L15 OS=Pongo abelii GN=RPL15 PE=2 SV=3) HSP 1 Score: 189.889 bits (481), Expect = 3.820e-57 Identity = 93/149 (62.42%), Postives = 104/149 (69.80%), Query Frame = 1
Query: 34 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPQDQ 480
MGAYKY+ ELWRKKQSDVMRFL RVRCW+YRQ ++ R RPTRPDKARRLGYKAKQ YGKP + GV QLKF RS +SVAEERAGR G L+VLNSYW+ EDSTYK+FEVIL+D H AIR +P Q
Sbjct: 1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQ 149 HSP 2 Score: 53.1434 bits (126), Expect = 3.820e-57 Identity = 25/33 (75.76%), Postives = 27/33 (81.82%), Query Frame = 2
Query: 470 PRINWICKPVHKHRELRGLTSAGKKYRGLRGKG 568
P WI KPVHKHRE+RGLTSAG+K RGL GKG
Sbjct: 146 PDTQWITKPVHKHREMRGLTSAGRKSRGL-GKG 177 The following BLAST results are available for this feature:
BLAST of FC927584 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >FC927584 ID=FC927584; Name=FC927584; organism=Citrus clementina; type=EST; length=598bpback to top |