FC928266

Overview
NameFC928266
Unique NameFC928266
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length575
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC928266 vs. ExPASy Swiss-Prot
Match: IPYR_SOLTU (Soluble inorganic pyrophosphatase OS=Solanum tuberosum GN=PPA PE=2 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 3.869e-68
Identity = 123/136 (90.44%), Postives = 130/136 (95.59%), Query Frame = 2
Query:  167 APQGSVPRLNERILSSMSRRSVAAHPWHDLEIGPGAPTIFNVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDHGEKDDKIIAVCADD 574
            +PQ   PRLNERILSS+SRRSVAAHPWHDLEIGP AP++FNVV+EISKGSKVKYELDKKTGLIKVDRILYSSVVYP NYGFIPRTLCEDNDPMDVL+LMQEPVLPGCFLRA+AIGLMPMID GEKDDKIIAVCADD
Sbjct:    9 SPQRRAPRLNERILSSISRRSVAAHPWHDLEIGPEAPSVFNVVIEISKGSKVKYELDKKTGLIKVDRILYSSVVYPQNYGFIPRTLCEDNDPMDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADD 144          
BLAST of FC928266 vs. ExPASy Swiss-Prot
Match: IPYR_MAIZE (Soluble inorganic pyrophosphatase OS=Zea mays GN=IPP PE=2 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 4.729e-66
Identity = 123/151 (81.46%), Postives = 133/151 (88.08%), Query Frame = 2
Query:  122 MSEEAAHGDGSEAVEAPQGSVPRLNERILSSMSRRSVAAHPWHDLEIGPGAPTIFNVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDHGEKDDKIIAVCADD 574
            MSEE    D + A        P+LNERILSS+SRRSVAAHPWHDLEIGP AP +FNVVVEI+KGSKVKYELDKKTGLIKVDR+LYSSVVYPHNYGF+PRTLCEDNDPMDVL+LMQEPV+PG FLRA+AIGLMPMID GEKDDKIIAVCADD
Sbjct:    1 MSEE----DKTAASAEQPKRAPKLNERILSSLSRRSVAAHPWHDLEIGPDAPAVFNVVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFVPRTLCEDNDPMDVLVLMQEPVVPGSFLRARAIGLMPMIDQGEKDDKIIAVCADD 147          
BLAST of FC928266 vs. ExPASy Swiss-Prot
Match: IPYR_HORVD (Soluble inorganic pyrophosphatase OS=Hordeum vulgare var. distichum GN=IPP PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 1.797e-65
Identity = 123/154 (79.87%), Postives = 134/154 (87.01%), Query Frame = 2
Query:  122 MSEEAAHGDGSEAVEAPQGS---VPRLNERILSSMSRRSVAAHPWHDLEIGPGAPTIFNVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDHGEKDDKIIAVCADD 574
            MS+E    D + A  A Q +    P+LNERILSS+SRR   AHPWHDLEIGPGAP +FNVVVEI+KGSKVKYELDKKTGLIKVDR+LYSSVVYPHNYGFIPRTLCEDNDPMDVL+LMQEPV+PG FLRA+AIGLMPMID GEKDDKIIAVCADD
Sbjct:    1 MSQE----DSTSAAAAQQPTSRPAPKLNERILSSLSRRGGGAHPWHDLEIGPGAPAVFNVVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDNDPMDVLVLMQEPVIPGSFLRARAIGLMPMIDQGEKDDKIIAVCADD 150          
BLAST of FC928266 vs. ExPASy Swiss-Prot
Match: IPYR_ORYSJ (Soluble inorganic pyrophosphatase OS=Oryza sativa subsp. japonica GN=IPP PE=2 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 1.424e-62
Identity = 119/150 (79.33%), Postives = 128/150 (85.33%), Query Frame = 2
Query:  134 AAHGDGSEAVEAPQGS---VPRLNERILSSMSRRSVAAHPWHDLEIGPGAPTIFNVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDHGEKDDKIIAVCADD 574
            A   DG    +AP GS      LNERILSSMS++ VAAHPWHDLEIGPGAP +FN VVEI +GSKVKYELDK TGLIKVDR+LYSSVVYPHNYGFIPRTLCED DPMDVL+LMQE V+PGCFLRA+AIGLMPMID GEKDDKIIAVCADD
Sbjct:    2 AGEADG----KAPLGSRYPPAALNERILSSMSQKHVAAHPWHDLEIGPGAPAVFNCVVEIPRGSKVKYELDKATGLIKVDRVLYSSVVYPHNYGFIPRTLCEDGDPMDVLVLMQEQVVPGCFLRARAIGLMPMIDQGEKDDKIIAVCADD 147          
BLAST of FC928266 vs. ExPASy Swiss-Prot
Match: IPYR_ORYSI (Soluble inorganic pyrophosphatase OS=Oryza sativa subsp. indica GN=IPP PE=2 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 1.424e-62
Identity = 119/150 (79.33%), Postives = 128/150 (85.33%), Query Frame = 2
Query:  134 AAHGDGSEAVEAPQGS---VPRLNERILSSMSRRSVAAHPWHDLEIGPGAPTIFNVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDHGEKDDKIIAVCADD 574
            A   DG    +AP GS      LNERILSSMS++ VAAHPWHDLEIGPGAP +FN VVEI +GSKVKYELDK TGLIKVDR+LYSSVVYPHNYGFIPRTLCED DPMDVL+LMQE V+PGCFLRA+AIGLMPMID GEKDDKIIAVCADD
Sbjct:    2 AGEADG----KAPLGSRYPPAALNERILSSMSQKHVAAHPWHDLEIGPGAPAVFNCVVEIPRGSKVKYELDKATGLIKVDRVLYSSVVYPHNYGFIPRTLCEDGDPMDVLVLMQEQVVPGCFLRARAIGLMPMIDQGEKDDKIIAVCADD 147          
BLAST of FC928266 vs. ExPASy Swiss-Prot
Match: IPYR2_ARATH (Soluble inorganic pyrophosphatase 2 OS=Arabidopsis thaliana GN=PPA2 PE=2 SV=2)

HSP 1 Score: 224.942 bits (572), Expect = 2.128e-58
Identity = 105/128 (82.03%), Postives = 116/128 (90.62%), Query Frame = 2
Query:  191 LNERILSSMSRRSVAAHPWHDLEIGPGAPTIFNVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDHGEKDDKIIAVCADD 574
            LNER  ++ + RS AAHPWHDLEIGP APT+FN VVEISKG KVKYELDK +GLIKVDR+LYSS+VYPHNYGFIPRT+CED+DPMDVL+LMQEPVL G FLRA+AIGLMPMID GEKDDKIIAVCADD
Sbjct:   24 LNERNFAAFTHRSAAAHPWHDLEIGPEAPTVFNCVVEISKGGKVKYELDKNSGLIKVDRVLYSSIVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLTGSFLRARAIGLMPMIDQGEKDDKIIAVCADD 151          
BLAST of FC928266 vs. ExPASy Swiss-Prot
Match: IPYR2_CHLRE (Soluble inorganic pyrophosphatase 2 OS=Chlamydomonas reinhardtii GN=ppa2 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.066e-45
Identity = 84/117 (71.79%), Postives = 97/117 (82.91%), Query Frame = 2
Query:  224 RSVAAHPWHDLEIGPGAPTIFNVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDHGEKDDKIIAVCADD 574
            R  A+HPWHDL  G  AP   + V+EI +GSKVKYELDK TGL  VDRILYSSVVYPHNYGF+P+TLCED DP+DVL+LMQEPV+P CFLRAK IG+M M+D GE+DDK+IAV ADD
Sbjct:    5 RGTASHPWHDLHPGNDAPNFVSCVIEIPRGSKVKYELDKDTGLCFVDRILYSSVVYPHNYGFVPKTLCEDGDPLDVLVLMQEPVVPMCFLRAKPIGVMQMLDQGERDDKLIAVHADD 121          
BLAST of FC928266 vs. ExPASy Swiss-Prot
Match: IPYR_LEPIN (Inorganic pyrophosphatase OS=Leptospira interrogans GN=ppa PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.063e-33
Identity = 63/112 (56.25%), Postives = 85/112 (75.89%), Query Frame = 2
Query:  239 HPWHDLEIGPGAPTIFNVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDHGEKDDKIIAVCADD 574
            HPWHD+  G   P I N V+EI +GS+ KYE+DK+ G++K+DR+LYSS  YP NYGFIP++ C D DP+D+L+L Q  + P C ++AK IG+M M+D GE+DDKIIAV A+D
Sbjct:    3 HPWHDISPGDQNPEIVNGVIEIKRGSRAKYEVDKEYGILKLDRVLYSSFYYPANYGFIPQSYCGDQDPLDILVLSQVELEPLCLVKAKVIGVMRMLDSGEEDDKIIAVAAND 114          
BLAST of FC928266 vs. ExPASy Swiss-Prot
Match: IPYR_LEPIC (Inorganic pyrophosphatase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=ppa PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.063e-33
Identity = 63/112 (56.25%), Postives = 85/112 (75.89%), Query Frame = 2
Query:  239 HPWHDLEIGPGAPTIFNVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDHGEKDDKIIAVCADD 574
            HPWHD+  G   P I N V+EI +GS+ KYE+DK+ G++K+DR+LYSS  YP NYGFIP++ C D DP+D+L+L Q  + P C ++AK IG+M M+D GE+DDKIIAV A+D
Sbjct:    3 HPWHDISPGDQNPEIVNGVIEIKRGSRAKYEVDKEYGILKLDRVLYSSFYYPANYGFIPQSYCGDQDPLDILVLSQVELEPLCLVKAKVIGVMRMLDSGEEDDKIIAVAAND 114          
BLAST of FC928266 vs. ExPASy Swiss-Prot
Match: IPYR_PYRFU (Inorganic pyrophosphatase OS=Pyrococcus furiosus GN=ppa PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.698e-31
Identity = 61/112 (54.46%), Postives = 83/112 (74.11%), Query Frame = 2
Query:  239 HPWHDLEIGPGAPTIFNVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLILMQEPVLPGCFLRAKAIGLMPMIDHGEKDDKIIAVCADD 574
            +P+HDLE GP  P +   ++EI KGS+ KYELDKKTGL+K+DR+LYS   YP +YG IPRT  ED+DP D++++M+EPV P   + A+ IGL  MID G+KD K++AV  +D
Sbjct:    2 NPFHDLEPGPDVPEVVYAIIEIPKGSRNKYELDKKTGLLKLDRVLYSPFFYPVDYGIIPRTWYEDDDPFDIMVIMREPVYPLTIIEARPIGLFKMIDSGDKDYKVLAVPVED 113          
The following BLAST results are available for this feature:
BLAST of FC928266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
IPYR_SOLTU3.869e-6890.44Soluble inorganic pyrophosphatase OS=Solanum tuber... [more]
IPYR_MAIZE4.729e-6681.46Soluble inorganic pyrophosphatase OS=Zea mays GN=I... [more]
IPYR_HORVD1.797e-6579.87Soluble inorganic pyrophosphatase OS=Hordeum vulga... [more]
IPYR_ORYSJ1.424e-6279.33Soluble inorganic pyrophosphatase OS=Oryza sativa ... [more]
IPYR_ORYSI1.424e-6279.33Soluble inorganic pyrophosphatase OS=Oryza sativa ... [more]
IPYR2_ARATH2.128e-5882.03Soluble inorganic pyrophosphatase 2 OS=Arabidopsis... [more]
IPYR2_CHLRE2.066e-4571.79Soluble inorganic pyrophosphatase 2 OS=Chlamydomon... [more]
IPYR_LEPIN1.063e-3356.25Inorganic pyrophosphatase OS=Leptospira interrogan... [more]
IPYR_LEPIC1.063e-3356.25Inorganic pyrophosphatase OS=Leptospira interrogan... [more]
IPYR_PYRFU1.698e-3154.46Inorganic pyrophosphatase OS=Pyrococcus furiosus G... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YK15FM1 TF Citrus clementina cDNA clone KN0AAP12YK15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC928266 ID=FC928266; Name=FC928266; organism=Citrus clementina; type=EST; length=575bp
TTAATCATGCCAAAACATTAATATATTATAGATGGCAATAGATCCATTGC
TGTATCACTCTATGAATCTCCTCTCAAGATTACACCTACAGTAAGTGATT
ATATGTTATGTTGGGGCAGAGATGAGTGAGGAGGCGGCGCATGGAGATGG
AAGTGAAGCTGTTGAAGCTCCACAGGGTTCAGTTCCTCGGCTGAACGAGA
GGATCCTCTCATCTATGTCGAGGAGATCAGTTGCTGCACATCCTTGGCAT
GATCTTGAAATTGGACCTGGAGCTCCCACCATCTTCAATGTTGTTGTTGA
GATATCAAAGGGAAGTAAGGTCAAATATGAACTTGACAAGAAAACAGGAT
TGATTAAGGTTGATCGAATTCTTTATTCCTCTGTGGTCTATCCTCATAAC
TATGGTTTCATCCCTCGCACATTATGTGAAGATAATGATCCAATGGATGT
TTTGATTCTTATGCAGGAGCCAGTCCTTCCCGGATGTTTCCTGCGGGCCA
AGGCTATTGGATTAATGCCCATGATTGATCACGGAGAAAAAGATGATAAG
ATCATTGCAGTTTGTGCCGATGATC
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