FC928829
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC928829 vs. ExPASy Swiss-Prot
Match: AB15G_ARATH (ABC transporter G family member 15 OS=Arabidopsis thaliana GN=ABCG15 PE=2 SV=2) HSP 1 Score: 234.187 bits (596), Expect = 8.970e-64 Identity = 112/194 (57.73%), Postives = 147/194 (75.77%), Query Frame = 3 Query: 3 IKMGLQACAETKIGNWHLRGISSGEKKRLSISIEILTQPTVLLLDEPTSGLDSASAFFVIQVLKCIALDGRIVVCSIHQPSSHXXXXXXXXXXXSNGETIYFGDAKMAVKFFAEAGFPCPSRRNPSDHFLRCINSDFDKVAGSSLKSQAPTEIPMSSNSLMYLSTEEIKAKLVEEYRNSEISMNIRKRVRELAH 584 +++GLQ C++ IGNWH RG+S GE+KR+SI++EILT+P +L LDEPTSGLDSASAFFVIQ L+ IA DGR V+ S+HQPSS S+GE++YFG+AK AV+FFAE+GFPCP +RNPSDHFLRCINSDFD V + SQ E P +S+ LM L+T IKA+LVE Y+ S+ + + + R+REL++ Sbjct: 149 MELGLQDCSDRVIGNWHARGVSGGERKRVSIALEILTRPQILFLDEPTSGLDSASAFFVIQALRNIARDGRTVISSVHQPSSEVFALFDDLFLLSSGESVYFGEAKSAVEFFAESGFPCPKKRNPSDHFLRCINSDFDTVTATLKGSQRIQETPATSDPLMNLATSVIKARLVENYKRSKYAKSAKSRIRELSN 342 HSP 2 Score: 31.187 bits (69), Expect = 8.970e-64 Identity = 13/27 (48.15%), Postives = 17/27 (62.96%), Query Frame = 1 Query: 667 EETVLSKDRASWWKQLCILSHRSFLNM 747 E + A+WWKQL L+ RSF+NM Sbjct: 347 EMEIRKGSEATWWKQLRTLTARSFINM 373
BLAST of FC928829 vs. ExPASy Swiss-Prot
Match: AB12G_ARATH (ABC transporter G family member 12 OS=Arabidopsis thaliana GN=ABCG12 PE=1 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 1.989e-63 Identity = 119/194 (61.34%), Postives = 146/194 (75.26%), Query Frame = 3 Query: 3 IKMGLQACAETKIGNWHLRGISSGEKKRLSISIEILTQPTVLLLDEPTSGLDSASAFFVIQVLKCIALDG-RIVVCSIHQPSSHXXXXXXXXXXXSNGETIYFGDAKMAVKFFAEAGFPCPSRRNPSDHFLRCINSDFDKVAGSSLKSQAPTEIPMSSNSLMYLSTEEIKAKLVEEYRNSEISMNIRKRVRELA 581 I++GLQ CA+ IGNWH RG+S GE+KR+S+++EILT+P +L LDEPTSGLDSASAFFVIQ L+ IA DG R VV SIHQPSS S+GET+YFG++K AV+FFAEAGFPCP +RNPSDHFLRCINSDFD V + SQ E P +S+ LM L+T EIKA+LVE YR S + + + R+RELA Sbjct: 148 IELGLQDCADRVIGNWHSRGVSGGERKRVSVALEILTRPQILFLDEPTSGLDSASAFFVIQALRNIARDGGRTVVSSIHQPSSEVFALFDDLFLLSSGETVYFGESKFAVEFFAEAGFPCPKKRNPSDHFLRCINSDFDTVTATLKGSQRIRETPATSDPLMNLATSEIKARLVENYRRSVYAKSAKSRIRELA 341 HSP 2 Score: 26.9498 bits (58), Expect = 1.989e-63 Identity = 11/18 (61.11%), Postives = 15/18 (83.33%), Query Frame = 1 Query: 694 ASWWKQLCILSHRSFLNM 747 A+W+KQL L+ RSF+NM Sbjct: 357 ATWFKQLRTLTKRSFVNM 374
BLAST of FC928829 vs. ExPASy Swiss-Prot
Match: AB13G_ARATH (ABC transporter G family member 13 OS=Arabidopsis thaliana GN=ABCG13 PE=2 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 3.315e-57 Identity = 106/201 (52.74%), Postives = 138/201 (68.66%), Query Frame = 3 Query: 9 MGLQACAETKIGNWHLRGISSGEKKRLSISIEILTQPTVLLLDEPTSGLDSASAFFVIQVLKCIALDGRIVVCSIHQPSSHXXXXXXXXXXXSNGETIYFGDAKMAVKFFAEAGFPCPSRRNPSDHFLRCINSDFDKVAGSSLKSQAPTEIPMSSNSLMY----------LSTEEIKAKLVEEYRNSEISMNIRKRVRELA 581 MGL+ C++ IGNWHLRGIS GEKKRLSI++E+LT+P++L LDEPTSGLDSASAFFV+Q+L+ IA G+ VV SIHQPS S GET+YFG+A+ A KFF EAGFPCPSRRNPSDHFLRC+NSDFD V + ++S+ + S + L + T EI+ LV +++ S + R R++E+A Sbjct: 136 MGLEECSDRTIGNWHLRGISGGEKKRLSIALEVLTKPSLLFLDEPTSGLDSASAFFVVQILRNIASSGKTVVSSIHQPSGEVFALFDDLLLLSGGETVYFGEAESATKFFGEAGFPCPSRRNPSDHFLRCVNSDFDNVTAALVESRRINDSSFSLHQLHETTNTLDPLDDIPTAEIRTTLVRKFKCSLYAAASRARIQEIA 336 HSP 2 Score: 32.3426 bits (72), Expect = 3.315e-57 Identity = 12/19 (63.16%), Postives = 16/19 (84.21%), Query Frame = 1 Query: 691 RASWWKQLCILSHRSFLNM 747 + +WWKQL IL+ RSF+NM Sbjct: 350 QTNWWKQLRILTQRSFINM 368
BLAST of FC928829 vs. ExPASy Swiss-Prot
Match: AB11G_ARATH (ABC transporter G family member 11 OS=Arabidopsis thaliana GN=ABCG11 PE=1 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 3.435e-53 Identity = 105/193 (54.40%), Postives = 133/193 (68.91%), Query Frame = 3 Query: 3 IKMGLQACAETKIGNWHLRGISSGEKKRLSISIEILTQPTVLLLDEPTSGLDSASAFFVIQVLKCIALDGRIVVCSIHQPSSHXXXXXXXXXXXSNGETIYFGDAKMAVKFFAEAGFPCPSRRNPSDHFLRCINSDFDKVAGSSLKSQAPTEIPMSSNSLMYLSTEEIKAKLVEEYRNSEISMNIRKRVRELA 581 I+MGLQ CA+T IGNWHLRGIS GEK+R+SI++EIL +P +L LDEPTSGLDSASAFFV Q L+ ++ DGR V+ SIHQPSS S G+T+YFG A A +FFA+AGFPCP+ RNPSDHFLRCINSDFDKV ++LK S + L ++T E LV+ Y S+ + +V E++ Sbjct: 173 IEMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALSRDGRTVIASIHQPSSEVFELFDRLYLLSGGKTVYFGQASDAYEFFAQAGFPCPALRNPSDHFLRCINSDFDKVR-ATLKGSMKLRFEASDDPLEKITTAEAIRLLVDYYHTSDYYYTAKAKVEEIS 364
BLAST of FC928829 vs. ExPASy Swiss-Prot
Match: ABCG1_DICDI (ABC transporter G family member 1 OS=Dictyostelium discoideum GN=abcG1 PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.395e-30 Identity = 64/144 (44.44%), Postives = 96/144 (66.67%), Query Frame = 3 Query: 6 KMGLQACAETKIGNWH--LRGISSGEKKRLSISIEILTQPTVLLLDEPTSGLDSASAFFVIQVLKCIALDGRIVVCSIHQPSSHXXXXXXXXXXXSNGETIYFGDAKMAVKFFAEAGFPCPSRRNPSDHFLRCINSDFDKVAGS 431 +MGL CA+T +G +RGIS GE++R++ISIE+LT P+V+LLDEPTSGLD++++F+V+ LK +A GR ++C+IHQP S+ +G TIY+G A A+++F G+ C + NP+D FL IN+ + A S Sbjct: 243 EMGLNRCADTLVGTADNKIRGISGGERRRVTISIELLTGPSVILLDEPTSGLDASTSFYVMSALKKLAKSGRTIICTIHQPRSNIYDMFDNLLLLGDGNTIYYGKANKALEYFNANGYHCSEKTNPADFFLDLINTQVEDQADS 386
BLAST of FC928829 vs. ExPASy Swiss-Prot
Match: WHT1_CAEEL (ABC transporter ATP-binding protein/permease wht-1 OS=Caenorhabditis elegans GN=wht-1 PE=2 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 7.212e-27 Identity = 65/147 (44.22%), Postives = 91/147 (61.90%), Query Frame = 3 Query: 6 KMGLQACAETKIGNWH-LRGISSGEKKRLSISIEILTQPTVLLLDEPTSGLDSASAFFVIQVLKCIALDGRIVVCSIHQPSSHXXXXXXXXXXXSNGETIYFGDAKMAVKFFAEAGFPCPSRRNPSDHFLRCINSDFDKVAGSSLKS 443 +MGL+ CA+T IG + L+G+S GEKKRLS + EILT P +L DEPTSGLD+ A V+Q L+ +A +G V+ +IHQPSSH + G IY G AV F + G+PCP+ NP+DH +R + + D +S+K+ Sbjct: 117 QMGLKKCADTVIGIPNQLKGLSCGEKKRLSFASEILTCPKILFCDEPTSGLDAFMAGHVVQALRSLADNGMTVIITIHQPSSHVYSLFNNVCLMACGRVIYLGPGDQAVPLFEKCGYPCPAYYNPADHLIRTL-AVIDSDRATSMKT 262
BLAST of FC928829 vs. ExPASy Swiss-Prot
Match: ABCG2_HUMAN (ATP-binding cassette sub-family G member 2 OS=Homo sapiens GN=ABCG2 PE=1 SV=3) HSP 1 Score: 120.553 bits (301), Expect = 9.419e-27 Identity = 67/192 (34.90%), Postives = 107/192 (55.73%), Query Frame = 3 Query: 6 KMGLQACAETKIGNWHLRGISSGEKKRLSISIEILTQPTVLLLDEPTSGLDSASAFFVIQVLKCIALDGRIVVCSIHQPSSHXXXXXXXXXXXSNGETIYFGDAKMAVKFFAEAGFPCPSRRNPSDHFLRCINSDFDKVAGSSLKSQAPTEIPMSSNSLMYLSTEEIKAKLVEEYRNSEISMNIRKRVRELA 581 ++GL A++K+G +RG+S GE+KR SI +E++T P++L LDEPT+GLDS++A V+ +LK ++ GR ++ SIHQP ++G ++ G A+ A+ +F AG+ C + NP+D FL IN D VA + + TEI S + + KL E Y NS + + +L+ Sbjct: 167 ELGLDKVADSKVGTQFIRGVSGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFKLFDSLTLLASGRLMFHGPAQEALGYFESAGYHCEAYNNPADFFLDIINGDSTAVALNREEDFKATEIIEPSK-----QDKPLIEKLAEIYVNSSFYKETKAELHQLS 353
BLAST of FC928829 vs. ExPASy Swiss-Prot
Match: ABCG2_MOUSE (ATP-binding cassette sub-family G member 2 OS=Mus musculus GN=Abcg2 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.607e-26 Identity = 57/139 (41.01%), Postives = 90/139 (64.75%), Query Frame = 3 Query: 6 KMGLQACAETKIGNWHLRGISSGEKKRLSISIEILTQPTVLLLDEPTSGLDSASAFFVIQVLKCIALDGRIVVCSIHQPSSHXXXXXXXXXXXSNGETIYFGDAKMAVKFFAEAGFPCPSRRNPSDHFLRCINSDFDKV 422 ++GL+ A++K+G +RGIS GE+KR SI +E++T P++L LDEPT+GLDS++A V+ +LK ++ GR ++ SIHQP ++G+ ++ G A+ A+++FA AG+ C NP+D FL IN D V Sbjct: 166 ELGLEKVADSKVGTQFIRGISGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFKLFDSLTLLASGKLVFHGPAQKALEYFASAGYHCEPYNNPADFFLDVINGDSSAV 304
BLAST of FC928829 vs. ExPASy Swiss-Prot
Match: ABCG2_MACMU (ATP-binding cassette sub-family G member 2 OS=Macaca mulatta GN=ABCG2 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.579e-26 Identity = 66/192 (34.38%), Postives = 107/192 (55.73%), Query Frame = 3 Query: 6 KMGLQACAETKIGNWHLRGISSGEKKRLSISIEILTQPTVLLLDEPTSGLDSASAFFVIQVLKCIALDGRIVVCSIHQPSSHXXXXXXXXXXXSNGETIYFGDAKMAVKFFAEAGFPCPSRRNPSDHFLRCINSDFDKVAGSSLKSQAPTEIPMSSNSLMYLSTEEIKAKLVEEYRNSEISMNIRKRVRELA 581 ++GL A++K+G +RG+S GE+KR SI +E++T P++L LDEPT+GLDS++A V+ +LK ++ GR ++ SIHQP ++G ++ G A+ A+ +F AG+ C + NP+D FL IN D VA + + TEI S + + KL E Y +S + + +L+ Sbjct: 167 ELGLDKVADSKVGTQFIRGVSGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFKLFDSLTLLASGRLMFHGPAQEALGYFESAGYHCEAYNNPADFFLDIINGDSTAVALNREEDFKATEIIEPSK-----RDKPLVEKLAEIYVDSSFYKETKAELHQLS 353
BLAST of FC928829 vs. ExPASy Swiss-Prot
Match: ABCG2_RAT (ATP-binding cassette sub-family G member 2 OS=Rattus norvegicus GN=Abcg2 PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.041e-25 Identity = 57/139 (41.01%), Postives = 88/139 (63.31%), Query Frame = 3 Query: 6 KMGLQACAETKIGNWHLRGISSGEKKRLSISIEILTQPTVLLLDEPTSGLDSASAFFVIQVLKCIALDGRIVVCSIHQPSSHXXXXXXXXXXXSNGETIYFGDAKMAVKFFAEAGFPCPSRRNPSDHFLRCINSDFDKV 422 ++GL A++K+G RGIS GE+KR SI +E++T P++L LDEPT+GLDS++A V+ +LK ++ GR ++ SIHQP ++G+ ++ G A+ A+++FA AG+ C NP+D FL IN D V Sbjct: 166 ELGLDKVADSKVGTQFTRGISGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFKLFDSLTLLASGKLMFHGPAQKALEYFASAGYHCEPYNNPADFFLDVINGDSSAV 304 The following BLAST results are available for this feature:
BLAST of FC928829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC928829 ID=FC928829; Name=FC928829; organism=Citrus clementina; type=EST; length=749bpback to top |