FC928831
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC928831 vs. ExPASy Swiss-Prot
Match: RPG1_ARATH (Protein RUPTURED POLLEN GRAIN 1 OS=Arabidopsis thaliana GN=RPG1 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.032e-27 Identity = 65/182 (35.71%), Postives = 110/182 (60.44%), Query Frame = 3 Query: 93 MFDHHQWGVAFGILGNIISFLVYLAPVPTFYRIYRKKSTESFQSLPYLVALFSSMLWFYYAL--VKQNAFLLVTINCFGCVIETIYIILFITY-APKGSRNSTVKLFVSMNVGVFSLILLLTHF-LATDSTRILILGWICVAVSVSVFAAPLSIVAQVIRTKSVEFMPFILSFFLTLSAIMW 626 M D Q G++GN+ISF ++ AP TF+RI++KKS E F +PY+ + + MLW +Y L V +++ L+ TIN G VIE Y+ +++ Y K + + F+++ V + I+L+T F L D + +G IC +++++ AP + +V++TKSVE+MPF+LS ++A +W Sbjct: 1 MVDAKQVRFIIGVIGNVISFGLFAAPAKTFWRIFKKKSVEEFSYVPYVATVMNCMLWVFYGLPVVHKDSILVSTINGVGLVIELFYVGVYLMYCGHKKNHRRNILGFLALEVILVVAIILITLFALKGDFVKQTFVGVICDVFNIAMYGAPSLAIIKVVKTKSVEYMPFLLSLVCFVNAGIW 182
BLAST of FC928831 vs. ExPASy Swiss-Prot
Match: R1AP1_XENTR (RAG1-activating protein 1 homolog OS=Xenopus tropicalis GN=rag1ap1 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.598e-12 Identity = 41/143 (28.67%), Postives = 82/143 (57.34%), Query Frame = 3 Query: 198 KKSTESFQSLPYLVALFSSMLWFYYALVKQNAFLLVTINCFGCVIETIYIILFITYAPKGSRNSTVKLFVSMNVGVFSLILLLTHFLATDSTRILILGWICVAVSVSVFAAPLSIVAQVIRTKSVEFMPFILSFFLTLSAIMW 626 K+S E+ Q LP+L +++ WFYY +K + L++ +N G ++T+Y+ +I Y+ + R ++ VS+ V +F T + ++R+ LG C ++S++ +PL+ +AQ+I++KS + + F L+ L++ W Sbjct: 32 KRSVENIQFLPFLTTDLNNLGWFYYGYLKGDGTLII-VNLIGASLQTLYMAAYILYSLE-RRYVVSQVLVSLGV-LFLAHCYFTLWTPDINSRLNQLGLFCSIFTISMYLSPLADLAQIIKSKSTKCLSFPLTVATFLTSTSW 171
BLAST of FC928831 vs. ExPASy Swiss-Prot
Match: R1AP1_XENLA (RAG1-activating protein 1 homolog OS=Xenopus laevis GN=rag1ap1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.047e-11 Identity = 41/148 (27.70%), Postives = 84/148 (56.76%), Query Frame = 3 Query: 198 KKSTESFQSLPYLVALFSSMLWFYYALVKQNAFLLVTINCFGCVIETIYIILFITYAPKGSRNSTVKLFVSMNVGVFSLILLL-----THFLATDSTRILILGWICVAVSVSVFAAPLSIVAQVIRTKSVEFMPFILSFFLTLSAIMW 626 ++S E+ Q LP+L +++ WFYY +K + L++ +N G ++++Y+ ++ Y+P+ + +V V V +LLL T ++ ++R+ LG C ++S++ +PL+ +AQ+IR+KS + + F L+ L++ W Sbjct: 32 QRSVENIQYLPFLTTDLNNLGWFYYGYLKGDGTLMI-VNVIGASLQSLYMGAYLLYSPE-------RRYVGSQVLVSLGVLLLGYCYFTLWILDLNSRLNQLGLFCSVFTISMYLSPLADLAQIIRSKSTKCLSFPLTVATFLTSSSW 171
BLAST of FC928831 vs. ExPASy Swiss-Prot
Match: R1AP1_PAPAN (RAG1-activating protein 1 OS=Papio anubis GN=RAG1AP1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.786e-11 Identity = 41/145 (28.28%), Postives = 80/145 (55.17%), Query Frame = 3 Query: 201 KSTESFQSLPYLVALFSSMLWFYYALVKQNAFLLVTINCFGCVIETIYIILFITYAPKGSRNSTVKLFVSMNVGVFSLILLLTHF---LATDSTRILILGWICVAVSVSVFAAPLSIVAQVIRTKSVEFMPFILSFFLTLSAIMW 626 +S ++ Q LP+L +++ W Y +K + L+V +N G ++T+YI+ ++ Y P R V L + +GV L+L +F + R+ +LG C ++S++ +PL+ +A+VI+TKS + + + L+ L++ W Sbjct: 37 RSVDNVQFLPFLTTEVNNLGWLSYGALKGDRILIV-VNTVGAALQTLYILAYLHYCP---RKRVVLLQTATLLGV--LLLGYGYFWLLVPNPEARLQLLGLFCSVFTISMYLSPLADLAKVIQTKSTQCLSYPLTIATVLTSASW 175
BLAST of FC928831 vs. ExPASy Swiss-Prot
Match: R1AP1_MOUSE (RAG1-activating protein 1 OS=Mus musculus GN=Rag1ap1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.332e-11 Identity = 39/146 (26.71%), Postives = 79/146 (54.11%), Query Frame = 3 Query: 195 RKKSTESFQSLPYLVALFSSMLWFYYALVKQNAFLLVTINCFGCVIETIYIILFITYAPK--GSRNSTVKLFVSMNVGVFSLILLLTHFLATDSTRILILGWICVAVSVSVFAAPLSIVAQVIRTKSVEFMPFILSFFLTLSAIMW 626 R +S ++ Q LP+L +++ W Y ++K + L++ +N G V++T+YI+ ++ Y+P+ G T L + +G LL+ A R+ LG C ++S++ +PL+ +A++++TKS + + F L+ + W Sbjct: 35 RTRSVDNIQFLPFLTTDVNNLSWLSYGVLKGDGTLII-VNSVGAVLQTLYILAYLHYSPQKHGVLLQTATLLAVLLLGYGYFWLLVPDLEA----RLQQLGLFCSVFTISMYLSPLADLAKIVQTKSTQRLSFSLTIATLFCSASW 175
BLAST of FC928831 vs. ExPASy Swiss-Prot
Match: R1AP1_HUMAN (RAG1-activating protein 1 OS=Homo sapiens GN=RAG1AP1 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.785e-11 Identity = 41/145 (28.28%), Postives = 79/145 (54.48%), Query Frame = 3 Query: 201 KSTESFQSLPYLVALFSSMLWFYYALVKQNAFLLVTINCFGCVIETIYIILFITYAPKGSRNSTVKLFVSMNVGVFSLILLLTHF---LATDSTRILILGWICVAVSVSVFAAPLSIVAQVIRTKSVEFMPFILSFFLTLSAIMW 626 +S ++ Q LP+L +++ W Y +K + L+V +N G ++T+YI+ ++ Y P R V L + +GV L+L +F + R+ LG C ++S++ +PL+ +A+VI+TKS + + + L+ L++ W Sbjct: 37 RSVDNVQFLPFLTTEVNNLGWLSYGALKGDGILIV-VNTVGAALQTLYILAYLHYCP---RKRVVLLQTATLLGV--LLLGYGYFWLLVPNPEARLQQLGLFCSVFTISMYLSPLADLAKVIQTKSTQCLSYPLTIATLLTSASW 175 The following BLAST results are available for this feature:
BLAST of FC928831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC928831 ID=FC928831; Name=FC928831; organism=Citrus clementina; type=EST; length=626bpback to top |