FC929455

Overview
NameFC929455
Unique NameFC929455
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length872
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15029 contig Ccv1_Contig15029:1..872. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.265e-33
Identity = 89/230 (38.70%), Postives = 131/230 (56.96%), Query Frame = 1
Query:  190 SKEPCSETKPESKSNSRWHLFYDLFRNKSKKSLVTLYPLKLSIRRSSSMREGIDMPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYG--MKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            S+ P +ET+  ++ +    +   L    +  ++V L+ + L +      +E I    N   N   S    K F    LQ AT++FS EN +G+GG+  VYKG L +GQ +A+KRL++  A +   +F +E  ++A + H N  KLLGY IEG   + V E  P+ SL   ++      +L+W IRYKI  GVA GLLYLH+  + RIIHRD+KA+NILL E+  P+I DF
Sbjct:  261 SRPPKNETRSVTQGDKNRGVPKALIFASASVAIVVLFIVLLVVFLKLRRKENIRNSENKHENENISTDSMK-FDFSVLQDATSHFSLENKLGEGGFGAVYKGVLSDGQKIAVKRLSKN-AQQGETEFKNEFLLVAKLQHRNLVKLLGYSIEGTERLLVYEFLPHTSLDKFIFDPIQGNELEWEIRYKIIGGVARGLLYLHQDSRLRIIHRDLKASNILLDEEMTPKIADF 488          
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 3.271e-32
Identity = 73/159 (45.91%), Postives = 106/159 (66.67%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMKE---KLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            FSL +++ ATNNF   N IG+GG+  VYKG+L +G ++A+K+L+ G+      +FL+E+G+++ + HPN  KL G  +EGG + +V E   N SLA  L+G +E   +L W  R KI +GVA GL YLHE  + +I+HRDIKA N+LL +   P+I DF
Sbjct:  612 FSLRQIKIATNNFDSANRIGEGGFGPVYKGKLFDGTIIAVKQLSTGSKQGN-REFLNEIGMISALHHPNLVKLYGCCVEGGQLLLVYEFVENNSLARALFGPQETQLRLDWPTRRKICIGVARGLAYLHEESRLKIVHRDIKATNVLLDKQLNPKISDF 769          
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 1.243e-31
Identity = 76/168 (45.24%), Postives = 108/168 (64.29%), Query Frame = 1
Query:  382 DSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRL--TRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK--LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            D  S   +     L++AT+NFS EN +G+GG+  VYKG    GQ +A+KRL  T G  D   ++F +E+ ++A + H N  +LLG+ IEG   I V E   N SL + ++ +K++  L WG+RYK+  GVA GLLYLHE  + RIIHRD+KA+NILL ++  P+I DF
Sbjct:  341 DEFSDSLVVDFETLKAATDNFSPENELGRGGFGSVYKGVFSGGQEIAVKRLSCTSGQGD---SEFKNEILLLAKLQHRNLVRLLGFCIEGQERILVYEFIKNASLDNFIFDLKKRQLLDWGVRYKMIGGVARGLLYLHEDSRYRIIHRDLKASNILLDQEMNPKIADF 505          
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.769e-31
Identity = 73/158 (46.20%), Postives = 103/158 (65.19%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK--LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            F L  + +AT+ FS EN +G+GG+  VYKG L NGQ VA+KRLT+G+    I +F +E+ ++  + H N  KLLG+  EG   I V E  PN SL   ++  +++  L W +RY+I  G+A GLLYLHE  Q +IIHRD+KA+NILL  +  P++ DF
Sbjct:  341 FDLGMVLAATDEFSSENTLGQGGFGTVYKGTLLNGQEVAVKRLTKGSGQGDI-EFKNEVSLLTRLQHRNLVKLLGFCNEGDEQILVYEFVPNSSLDHFIFDDEKRSLLTWEMRYRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADF 497          
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.052e-30
Identity = 75/169 (44.38%), Postives = 107/169 (63.31%), Query Frame = 1
Query:  379 YDSQSPQKI--FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK--LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            +DS + Q +  F L  + +ATNNFS EN +G+GG+  VYKG L +GQ +A+KRL +G+    + +F +E+ ++  + H N  KLLG+  E    I V E  PN SL   ++  +++  L W +RY I  GVA GLLYLHE  Q RIIHRD+KA+NILL  +  P++ DF
Sbjct:  322 FDSNNGQSMLRFDLRMIVTATNNFSLENKLGQGGFGSVYKGILPSGQEIAVKRLRKGSGQGGM-EFKNEVLLLTRLQHRNLVKLLGFCNEKDEEILVYEFVPNSSLDHFIFDEEKRRVLTWDVRYTIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADF 489          
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.374e-30
Identity = 74/161 (45.96%), Postives = 103/161 (63.98%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGM-----KEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            F + ++++AT+NF   N IG+GG+ EVYKG L NG  VA+KRL+R T+D+   +F +E+ ++A + H N  +LLG+ ++G   I V E  PN SL   L+G      K +L W  RY I  G+  GLLYLH+  +  IIHRDIKA+NILL  D  P+I DF
Sbjct:  334 FDIKDIEAATSNFLASNKIGQGGFGEVYKGTLSNGTEVAVKRLSR-TSDQGELEFKNEVLLVAKLQHRNLVRLLGFALQGEEKILVFEFVPNKSLDYFLFGSTNPTKKGQLDWTRRYNIIGGITRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADF 493          
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.795e-30
Identity = 75/168 (44.64%), Postives = 106/168 (63.10%), Query Frame = 1
Query:  379 YDSQSPQKI-FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEKL--KWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            YD     K+ F    + +AT++FSFEN IG+GG+  VYKG+L  G+ +A+KRLTRG+    I +F +E+ ++  + H N  KLLG+  EG   I V E  PN SL   ++  +++L   W +R +I  GVA GL+YLHE  Q RIIHRD+KA+NILL     P++ DF
Sbjct:  317 YDYGGQSKLRFDFRMILTATDDFSFENKIGQGGFGSVYKGKLPGGEEIAVKRLTRGSGQGEI-EFRNEVLLLTRLQHRNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEEKRLLLTWDMRARIIEGVARGLVYLHEDSQLRIIHRDLKASNILLDAYMNPKVADF 483          
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.061e-30
Identity = 70/158 (44.30%), Postives = 101/158 (63.92%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK--LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            F L  +  AT++FS EN +G+GG+  VYKG   NGQ VA+KRLT+G+    + +F +E+ ++  + H N  KLLG+  EG   I V E  PN SL   ++   ++  L W +R++I  G+A GLLYLHE  Q +IIHRD+KA+NILL  +  P++ DF
Sbjct:  336 FDLGMIVMATDDFSSENTLGQGGFGTVYKGTFPNGQEVAVKRLTKGSGQGDM-EFKNEVSLLTRLQHKNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEDKRSLLTWEVRFRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADF 492          
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.061e-30
Identity = 73/158 (46.20%), Postives = 101/158 (63.92%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK--LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            F    +++ATN FS  N +G GG+ EVYKG+L  G+ VAIKRL++G+      +F +E+ ++A + H N AKLLGY ++G   I V E  PN SL   L+  +++  L W  RYKI  G+A G+LYLH   +  IIHRD+KA+NILL  D  P+I DF
Sbjct:  335 FQFSAIEAATNKFSESNKLGHGGFGEVYKGQLITGETVAIKRLSQGSTQGA-EEFKNEVDVVAKLQHRNLAKLLGYCLDGEEKILVYEFVPNKSLDYFLFDNEKRRVLDWQRRYKIIEGIARGILYLHRDSRLTIIHRDLKASNILLDADMHPKISDF 491          
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 8.907e-30
Identity = 80/198 (40.40%), Postives = 117/198 (59.09%), Query Frame = 1
Query:  286 LVTLYPLKLSIRRSSSMREGIDMPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYG--MKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            LV ++ ++   +R+ + +E +    N    +   Q     F    +++ATN F   N +G+GG+ EVYKG L +G  VA+KRL++ T+ +   +F +E+ ++A + H N  KLLGY +EG   I V E  PN SL   L+   MK KL W  RYKI  G+A G+LYLH+  +  IIHRD+KA NILL +D  P+I DF
Sbjct:  279 LVAVFSVRAKNKRTLNEKEPVAEDGNDITTAGSLQ-----FDFKAIEAATNCFLPINKLGQGGFGEVYKGTLSSGLQVAVKRLSK-TSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDHFLFDSTMKMKLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDDDMNPKIADF 470          
The following BLAST results are available for this feature:
BLAST of FC929455 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 390
Match NameE-valueIdentityDescription
CRK26_ARATH2.265e-3338.70Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
Y1534_ARATH3.271e-3245.91Probable LRR receptor-like serine/threonine-protei... [more]
CRK28_ARATH1.243e-3145.24Cysteine-rich receptor-like protein kinase 28 OS=A... [more]
CRK39_ARATH2.769e-3146.20Putative cysteine-rich receptor-like protein kinas... [more]
CRK37_ARATH1.052e-3044.38Cysteine-rich receptor-like protein kinase 37 OS=A... [more]
CRK30_ARATH1.374e-3045.96Putative cysteine-rich receptor-like protein kinas... [more]
CRK38_ARATH1.795e-3044.64Cysteine-rich receptor-like protein kinase 38 OS=A... [more]
CRK40_ARATH3.061e-3044.30Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
CRK25_ARATH3.061e-3046.20Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
CRK19_ARATH8.907e-3040.40Cysteine-rich receptor-like protein kinase 19 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2CC11RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2CC11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929455 ID=FC929455; Name=FC929455; organism=Citrus clementina; type=EST; length=872bp
ATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAAGAAACAGA
ATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAAT
ATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCTT
GAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAAGAACC
ATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTAT
TCTACGACTTATTCAGAAACAAATCGAAGAAATCATTAGTCACATTGTAT
CCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTGA
TATGCCGAGGAATCTTTTTGTAAATTCCTACGATTCACAGTCTCCCCAGA
AGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTTC
GAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTT
GAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCAG
ATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGTC
GATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCAT
GCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTTT
ATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTTA
GGGGTAGCCGAAGGCTTACTTTATCTTCATGAGGGCTGTCAGAGGAGAAT
CATTCATAGAGATATTAAAGCTGCCAATATTTTGCTCACTGAGGACTTCG
AGCCTCAGATTTGTGATTTTGG
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