FC929836

Overview
NameFC929836
Unique NameFC929836
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length761
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9285 contig Ccv1_Contig9285:2..762. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 342.428 bits (877), Expect = 1.569e-93
Identity = 168/238 (70.59%), Postives = 194/238 (81.51%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEMVSMLEGSSNI 716
            EF+ EI MIS LQHPNLVK++GCC+EG +LLLVYEY+ENNSLA ALFG E  +L L+W  R K+C+GIA+GLA+LHEESR KIVHRDIKATNVLLD  LN KISDFGLAKLDEEE THISTR+AGTIGYMAPEYA+ GYLT KADVYSFGVV LEIVSGK+N +Y P       LDWA+ L   G+L+ELVDP LG+ F+K EA RM+ IALLCTN SP+LRP MS +VSML+G   +
Sbjct:  707 EFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFIYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLQGKIKV 944          
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 340.117 bits (871), Expect = 7.787e-93
Identity = 167/238 (70.17%), Postives = 194/238 (81.51%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEMVSMLEGSSNI 716
            EF+ EI MIS LQHPNLVK++GCC+EG +LLLVYEY+ENNSLA ALFG E  +L L+W  R KIC+GIA+GLA+LHEESR KIVHRDIKATNVLLD  LN KISDFGLAKL+++E THISTR+AGTIGYMAPEYA+ GYLT KADVYSFGVV LEIVSGK+N +Y P       LDWA+ L   G+L+ELVDP LG+ F+K EA RM+ IALLCTN SP+LRP MS +VSMLEG   +
Sbjct:  709 EFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKICIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLNDDENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLEGKIKV 946          
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 1.918e-91
Identity = 163/245 (66.53%), Postives = 207/245 (84.49%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFG-GENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEMVSMLEGSSNIPDVIPE 734
            EF+NEI MIS LQHPNLVK++GCCVEG+QL+LVYEY+ENN L+ ALFG  E+S+LKL+W  R+KI LGIA+GL FLHEESR KIVHRDIKA+NVLLD+DLN KISDFGLAKL+++  THISTR+AGTIGYMAPEYA+ GYLT KADVYSFGVVALEIVSGK+N ++ P  +    LDWA+ L   G+L+ELVDP L S++++ EA  M+ +AL+CTNASP+LRPTMS++VS++EG + + +++ +
Sbjct:  718 EFVNEIGMISALQHPNLVKLYGCCVEGNQLILVYEYLENNCLSRALFGKDESSRLKLDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLDKDLNAKISDFGLAKLNDDGNTHISTRIAGTIGYMAPEYAMRGYLTEKADVYSFGVVALEIVSGKSNTNFRPTEDFVYLLDWAYVLQERGSLLELVDPTLASDYSEEEAMLMLNVALMCTNASPTLRPTMSQVVSLIEGKTAMQELLSD 962          
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 334.724 bits (857), Expect = 3.272e-91
Identity = 162/238 (68.07%), Postives = 195/238 (81.93%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEMVSMLEGSSNI 716
            EFLNEI MIS L HPNLVK++GCCVEG QLLLVYE++ENNSLA ALFG + +QL+L+WP R+KIC+G+ARGLA+LHEESR KIVHRDIKATNVLLD+ LNPKISDFGLAKLDEE+ THISTR+AGT GYMAPEYA+ G+LT KADVYSFG+VALEIV G++N      +N    +DW   L     L+ELVDPRLGSE+N+ EA  MI+IA++CT++ P  RP+MSE+V MLEG   +
Sbjct:  664 EFLNEIGMISALHHPNLVKLYGCCVEGGQLLLVYEFVENNSLARALFGPQETQLRLDWPTRRKICIGVARGLAYLHEESRLKIVHRDIKATNVLLDKQLNPKISDFGLAKLDEEDSTHISTRIAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVHGRSNKIERSKNNTFYLIDWVEVLREKNNLLELVDPRLGSEYNREEAMTMIQIAIMCTSSEPCERPSMSEVVKMLEGKKMV 901          
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 329.717 bits (844), Expect = 1.053e-89
Identity = 164/251 (65.34%), Postives = 200/251 (79.68%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEMVSMLEGSSNIPDVIPEAGGLSEN 755
            EFLNEI  ISCLQHPNLVK+HG CVE  QLLL YEYMENNSL+ ALF  ++ Q+ ++WP R KIC GIA+GLAFLHEES  K VHRDIKATN+LLD+DL PKISDFGLA+LDEEEKTHIST+VAGTIGYMAPEYALWGYLT+KADVYSFGV+ LEIV+G  N +++   +  C L++A     SG LM++VD RL  E ++ EAE +IK+AL+C++ASP+ RP MSE+V+MLEG   +P+  P   G+S N
Sbjct:  721 EFLNEIGAISCLQHPNLVKLHGFCVERAQLLLAYEYMENNSLSSALFSPKHKQIPMDWPTRFKICCGIAKGLAFLHEESPLKFVHRDIKATNILLDKDLTPKISDFGLARLDEEEKTHISTKVAGTIGYMAPEYALWGYLTFKADVYSFGVLVLEIVAGITNSNFMGAGDSVCLLEFANECVESGHLMQVVDERLRPEVDRKEAEAVIKVALVCSSASPTDRPLMSEVVAMLEGLYPVPESTP---GVSRN 968          
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 279.641 bits (714), Expect = 1.249e-74
Identity = 142/250 (56.80%), Postives = 185/250 (74.00%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEMVSMLEGSSNIPDVIPEAGGLSE 752
            +F+ EI  IS +QH NLVK++GCC EG+  LLVYEY+ N SL  ALFG +   L L+W  R +ICLG+ARGL +LHEE+R +IVHRD+KA+N+LLD  L PK+SDFGLAKL +++KTHISTRVAGTIGY+APEYA+ G+LT K DVY+FGVVALE+VSG+ N     +      L+WA++LH  G  +EL+D +L +EFN  E +RMI IALLCT  S +LRP MS +V+ML G   + DV  + G L++
Sbjct:  733 QFVAEIVAISAVQHRNLVKLYGCCYEGEHRLLVYEYLPNGSLDQALFGEKT--LHLDWSTRYEICLGVARGLVYLHEEARLRIVHRDVKASNILLDSKLVPKVSDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEDEKRYLLEWAWNLHEKGREVELIDHQL-TEFNMEEGKRMIGIALLCTQTSHALRPPMSRVVAMLSGDVEVSDVTSKPGYLTD 979          
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 270.396 bits (690), Expect = 7.578e-72
Identity = 139/250 (55.60%), Postives = 183/250 (73.20%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEMVSMLEGSSNIPDVIPEAGGLSE 752
            +F+ EI  IS + H NLVK++GCC EG+  +LVYEY+ N SL  ALFG +   L L+W  R +ICLG+ARGL +LHEE+  +IVHRD+KA+N+LLD  L P+ISDFGLAKL +++KTHISTRVAGTIGY+APEYA+ G+LT K DVY+FGVVALE+VSG+ N     +      L+WA++LH     +EL+D +L ++FN  EA+RMI IALLCT  S +LRP MS +V+ML G   I DV  + G +S+
Sbjct:  734 QFVAEIVAISSVLHRNLVKLYGCCFEGEHRMLVYEYLPNGSLDQALFGDKT--LHLDWSTRYEICLGVARGLVYLHEEASVRIVHRDVKASNILLDSRLVPQISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEEEKKYLLEWAWNLHEKSRDIELIDDKL-TDFNMEEAKRMIGIALLCTQTSHALRPPMSRVVAMLSGDVEIGDVTSKPGYVSD 980          
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 7.595e-64
Identity = 123/237 (51.90%), Postives = 166/237 (70.04%), Query Frame = 3
Query:    6 FLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEMVSMLEGSSNI 716
            F NE+ +IS + H NLVK+ GC + G + LLVYEY+ N SL   LF  ++ Q  LNW  R KI LG A G+A+LHEES  +I+HRDIK +N+LL+ D  P+I+DFGLA+L  E+KTHIST +AGT+GYMAPEY + G LT KADVYSFGV+ +E+++GK N ++V D+       W+  L+R+  + E VDP LG  FNK+EA R+++I LLC  A+   RP MS +V M++GS  I
Sbjct:  364 FFNEVNLISQVDHKNLVKLLGCSITGPESLLVYEYIANQSLHDYLFVRKDVQ-PLNWAKRFKIILGTAEGMAYLHEESNLRIIHRDIKLSNILLEDDFTPRIADFGLARLFPEDKTHISTAIAGTLGYMAPEYVVRGKLTEKADVYSFGVLMIEVITGKRNNAFVQDAGSILQSVWS--LYRTSNVEEAVDPILGDNFNKIEASRLLQIGLLCVQAAFDQRPAMSVVVKMMKGSLEI 597          
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: CRK42_ARATH (Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 3.302e-59
Identity = 122/237 (51.48%), Postives = 161/237 (67.93%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEF-----NKVEAERMIKIALLCTNASPSLRPTMSEMVSML 698
            EF NE+ +IS +QH NLVK+ GC +EG + LLVYEY+ N SL   LF    S++ LNW  R  I LG A GLA+LH  S  +I+HRDIK +NVLLD  LNPKI+DFGLA+    +KTH+ST +AGT+GYMAPEY + G LT KADVYSFGV+ LEI  G    ++VP++       W  +L+    L+E +DP L  EF     ++ EA +++++ LLCT ASPSLRP+M E++ ML
Sbjct:  355 EFFNEVNLISGIQHKNLVKLLGCSIEGPESLLVYEYVPNKSLDQFLFDESQSKV-LNWSQRLNIILGTAEGLAYLHGGSPVRIIHRDIKTSNVLLDDQLNPKIADFGLARCFGLDKTHLSTGIAGTLGYMAPEYVVRGQLTEKADVYSFGVLVLEIACGTRINAFVPETGHLLQRVW--NLYTLNRLVEALDPCLKDEFLQVQGSEAEACKVLRVGLLCTQASPSLRPSMEEVIRML 588          
BLAST of FC929836 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 220.32 bits (560), Expect = 8.993e-57
Identity = 117/249 (46.99%), Postives = 169/249 (67.87%), Query Frame = 3
Query:    3 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHIST-RVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMS-YVPDSNCTCPLDWAFHLHRSGTLMELVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEMVSMLEGSSNIPDVIPEAGG 743
            EF NE  ++S LQH NLV++ G C+EG++ +LVYE++ N SL + LF     Q +L+W  R  I  GIARG+ +LH++SR  I+HRD+KA+N+LLD D+NPKI+DFG+A++   +++  +T R+AGT GYM+PEYA+ G+ + K+DVYSFGV+ LEI+SGK N S Y  D + +  +  A+ L R+G+ +ELVDP +G  +   EA R I IALLC    P+ RP +  ++ ML  S+    V P A G
Sbjct:  385 EFKNEAVLVSKLQHKNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLFDPAK-QGELDWTRRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGVDQSQANTRRIAGTFGYMSPEYAMRGHFSMKSDVYSFGVLVLEIISGKKNSSFYNIDDSGSNLVTHAWRLWRNGSPLELVDPTIGESYQSSEATRCIHIALLCVQEDPADRPLLPAIIMMLTSSTTTLHV-PRAPG 631          
The following BLAST results are available for this feature:
BLAST of FC929836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y5344_ARATH1.569e-9370.59Probable LRR receptor-like serine/threonine-protei... [more]
Y5343_ARATH7.787e-9370.17Probable LRR receptor-like serine/threonine-protei... [more]
Y1765_ARATH1.918e-9166.53Probable LRR receptor-like serine/threonine-protei... [more]
Y1534_ARATH3.272e-9168.07Probable LRR receptor-like serine/threonine-protei... [more]
RKF1_ARATH1.053e-8965.34Probable LRR receptor-like serine/threonine-protei... [more]
Y5614_ARATH1.249e-7456.80Probable LRR receptor-like serine/threonine-protei... [more]
Y1561_ARATH7.578e-7255.60Probable LRR receptor-like serine/threonine-protei... [more]
CRK3_ARATH7.595e-6451.90Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]
CRK42_ARATH3.302e-5951.48Cysteine-rich receptor-like protein kinase 42 OS=A... [more]
CRK35_ARATH8.993e-5746.99Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3AG09RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3AG09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929836 ID=FC929836; Name=FC929836; organism=Citrus clementina; type=EST; length=761bp
GTGAATTCTTAAATGAGATAGCCATGATTTCGTGTTTGCAACACCCAAAT
CTTGTTAAAATTCATGGCTGTTGTGTTGAAGGGGATCAACTCTTGCTAGT
ATATGAATACATGGAAAACAACAGCCTTGCCCATGCTTTATTCGGTGGCG
AAAACAGTCAACTGAAATTGAACTGGCCAGTGAGGCAGAAGATCTGCCTT
GGGATAGCCAGAGGTTTAGCTTTTCTACATGAAGAATCCAGATTCAAAAT
AGTTCATAGAGACATCAAAGCTACGAATGTTCTGCTAGATAGAGATTTAA
ACCCCAAAATATCTGACTTTGGACTGGCTAAGCTTGATGAGGAGGAAAAA
ACTCACATCAGTACTCGAGTTGCTGGAACAATAGGATATATGGCACCAGA
GTACGCTCTATGGGGTTACTTGACCTACAAAGCAGATGTTTACAGTTTCG
GAGTTGTGGCTTTGGAAATCGTCAGTGGGAAGAATAATATGAGTTATGTG
CCAGACAGTAATTGCACCTGTCCTCTTGACTGGGCCTTCCATTTACACCG
AAGTGGTACGTTAATGGAGTTAGTGGATCCAAGGCTCGGATCAGAATTCA
ACAAGGTTGAAGCAGAGAGAATGATTAAAATAGCACTCTTATGCACCAAT
GCGTCACCTTCACTAAGGCCAACCATGTCTGAAATGGTAAGCATGCTGGA
AGGATCTTCTAACATTCCGGATGTAATCCCTGAAGCCGGTGGTTTGAGTG
AAAACTTGAGG
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