FC929909
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929909 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 292.352 bits (747), Expect = 1.675e-78 Identity = 140/243 (57.61%), Postives = 171/243 (70.37%), Query Frame = 1 Query: 4 CNQVVCR-ECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFF 717 C Q C+ +C P G G+L IIS F+D+L++RND CPAR FYTY+AFI AAK+FP FG +G+ RK+E+AAFF QT HETTGGW AP G Y+WGYCF +E A SDYC+P+ +PC +YYGRGP+QLSWNYNY C NNPDL+A D V++FK+AIWFWMTAQPPKPSCH VI +W+PS D AGRLPGYG+ TNIINGG+ECG + V +RIGF+ Sbjct: 64 CKQPGCQSQCTPGGTPPGPTGDLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPA-SDYCEPSATWPCASGKRYYGRGPMQLSWNYNYGLC--GRAIGVDLLNNPDLVANDAVIAFKAAIWFWMTAQPPKPSCHAVIAGQWQPSDADRAAGRLPGYGVITNIINGGLECGRGQDGRVADRIGFY 303
BLAST of FC929909 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 2.418e-77 Identity = 142/231 (61.47%), Postives = 168/231 (72.73%), Query Frame = 1 Query: 43 GTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGG--WPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFF 717 G+ GD G L +I+R+ F+ +L +RND CPAR FYTYDAFI AAK+FPAF +G++ RKRE+AAF AQT HETTGG W AP G Y WGYC+NRE+ A DYC DPNYPC GK Y+GRGP+QL+WNYNY +C NNPDLLATDP +SFKSA WFWMT Q PKPSCH+VII W PS +D AGR+PG+GL TNIINGG+ECG N V +RIGF+ Sbjct: 64 GSGGDTGGLDSLITRERFDQMLLHRNDGGCPARGFYTYDAFIAAAKSFPAFATTGDDATRKREVAAFLAQTSHETTGGAGWA-APDGPYTWGYCYNRELNPA--DYCQWDPNYPCAPGKQYFGRGPMQLTWNYNYGQCGRAIGVDLL--NNPDLLATDPTISFKSAFWFWMTPQSPKPSCHDVIIGAWSPSGSDQAAGRVPGFGLITNIINGGLECGQGWNAKVEDRIGFY 289
BLAST of FC929909 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 1.200e-76 Identity = 139/242 (57.44%), Postives = 170/242 (70.25%), Query Frame = 1 Query: 4 CNQVVCRECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFF 717 C C+ P T GG+LG IIS MF+ +L++RND C + FY+Y+AFI AA++FP FG SG+ T RKREIAAFFAQT HETTGGW AP G YAWGYC+ RE G + DYC P+ +PC KY+GRGPIQ+S NYNY C NNPDL+ATDPV+SFKSA+WFWMT Q PKPSCH+VII W+PS+ D A RLPG+G+ TNIINGG+ECG + V++RIGF+ Sbjct: 54 CGPGNCQSQCPGGPTPPGGGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQG-SPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPC--GRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSSADRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFY 292
BLAST of FC929909 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 286.189 bits (731), Expect = 1.200e-76 Identity = 140/243 (57.61%), Postives = 169/243 (69.55%), Query Frame = 1 Query: 1 NCNQVVCRECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFF 717 NC P T GG+LG IIS MF+ +L++RND C + FY+Y+AFI AA++FP FG SG+ T RKREIAAFFAQT HETTGGW AP G YAWGYC+ RE G + DYC P+ +PC KY+GRGPIQ+S NYNY C NNPDL+ATDPV+SFKSA+WFWMT Q PKPSCH+VII W+PSA D A RLPG+G+ TNIINGG+ECG + V++RIGF+ Sbjct: 58 NCQSQCPGGPTPTPPTPPGGGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQG-SPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPC--GRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSAGDRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFY 297
BLAST of FC929909 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 285.804 bits (730), Expect = 1.567e-76 Identity = 140/244 (57.38%), Postives = 172/244 (70.49%), Query Frame = 1 Query: 4 CNQVVCR-ECDPDDGTA-GDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFF 717 C Q C+ +C GT G G+L IISR F+D+L++RND CPAR FYTYDAFI AAK+FP FG +G+ RK+EIAAFF QT HETTGGW AP G Y+WGYCF +E SS+YC P+ +PC YYGRGP+QLSWNYNY +C NNPDL++ DPV++FK+AIWFWMT Q PKPSCH VI+ +W+PS D AGR+PGYG+ TNIINGG+ECG + V +RIGF+ Sbjct: 51 CKQPGCQSQCG---GTPPGPTGDLSGIISRSQFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQN-PSSNYCSPSAEWPCASGKSYYGRGPMQLSWNYNYGQC--GRAIGSDLLNNPDLVSNDPVIAFKAAIWFWMTPQSPKPSCHAVIVGQWQPSDADRAAGRVPGYGVITNIINGGLECGRGQDARVADRIGFY 288
BLAST of FC929909 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 284.648 bits (727), Expect = 3.492e-76 Identity = 144/237 (60.76%), Postives = 164/237 (69.20%), Query Frame = 1 Query: 28 CDPDDGTAGDG--GELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDP--NYPC-RGKYY-GRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVG-NDAVRNRIGFF 717 CD D GDG G L II + F+ LL++RND RCPA FYTY+AFI AAK FP FGN+G++ MRKREIAAF QT HETTGGWPDAP G YAWGYC+ +E+ YCDP NY C GK Y GRGPIQLSWNYNY C P+L+ TDPV+SFK+AIWFWM Q PKPSCH VI W PSA D+ AGR+PGYG+ TNIINGGIECG G N A +RIGF+ Sbjct: 74 CDGGDDGGGDGDDGYLSDIIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEINC--QPYCDPSSNYQCVAGKQYCGRGPIQLSWNYNYGLC--GDDLKLPLLQEPELVETDPVISFKTAIWFWMKPQSPKPSCHAVITGNWTPSAADLEAGRVPGYGVITNIINGGIECGQGGPNAANEDRIGFY 306
BLAST of FC929909 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 1.016e-75 Identity = 137/233 (58.80%), Postives = 167/233 (71.67%), Query Frame = 1 Query: 34 PDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARC-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFF 717 P G GG++G +IS MF+ +L++RND C + FY+Y+AFI AA++F FG +G+ T RKREIAAFFAQT HETTGGWP AP G YAWGYCF RE G+ DYC P+ +PC KY+GRGPIQ+S NYNY C NNPDL+ATDPV+SFKSAIWFWMT Q PKPSCH+VII W+PSA D A RLPG+G+ TNIINGG+ECG + V++RIGF+ Sbjct: 67 PTPGPGPSGGDIGSVISNSMFDQMLKHRNDNACQGKNNFYSYNAFINAARSFGGFGTTGDTTARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPG-DYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLL--NNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVIIGRWQPSAADRAANRLPGFGVITNIINGGLECGRGSDSRVQDRIGFY 296
BLAST of FC929909 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 1.016e-75 Identity = 144/244 (59.02%), Postives = 169/244 (69.26%), Query Frame = 1 Query: 4 CNQVVCRECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGG--WPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFF 717 C C+ G A G L +ISR+ F +L +RND CPAR FYTYDAFI AA++FPAF +G++ RKREIAAF AQT HETTGG W AP G YAWGYC+NRE+ SS YC DPNYPC GK Y+GRGP+QLSWNYNY +C NNPDLL++DP +SFKSA WFWMT Q PKPSCH VII W PS++D AGR+PGYG+ TNIINGG+ECG N V +RIGF+ Sbjct: 53 CTVPGCQSQCSGSGPAPGPGGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSS-YCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLL--NNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRVPGYGVITNIINGGLECGKGWNAQVEDRIGFY 292
BLAST of FC929909 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1) HSP 1 Score: 282.722 bits (722), Expect = 1.327e-75 Identity = 134/219 (61.19%), Postives = 162/219 (73.97%), Query Frame = 1 Query: 73 KIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFF 717 KIISR MF+ +L++RN+ CPA+ FYTYDAF+ AAK+FP+FG +G+ +RKRE+AAF QT HETTGGWP AP G YAWGYCF +E SS+YC P YPC GK YYGRGP+QLSWNYNY C NPDL+ATD VLSFK+A+WFWMT Q PKPSCH+V+ W+PSA D AGRLPGYG+ TN++NGG+ECG N V +R+GFF Sbjct: 4 KIISRSMFDQMLKHRNNPACPAKGFYTYDAFLAAAKSFPSFGTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERN-PSSNYCAPSPRYPCAPGKSYYGRGPLQLSWNYNYGPC--GEALRVNLLGNPDLVATDRVLSFKTALWFWMTPQAPKPSCHDVLTGRWQPSAADTAAGRLPGYGVLTNLLNGGLECGKGPNPQVADRLGFF 219
BLAST of FC929909 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1) HSP 1 Score: 281.567 bits (719), Expect = 2.956e-75 Identity = 131/229 (57.21%), Postives = 166/229 (72.49%), Query Frame = 1 Query: 43 GTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFF 717 G G GG + ++S+++FE LL +RND CPAR FYTYDA + AA AFP F +G++ RKRE+AAF QT HETTGGW AP G Y+WGYCF E+GA +S YC P+ +PC KY+GRGPIQLS+NYNY NNP+L+A+DPV+SFK+A+WFWMT Q PKPSCH+VI +W PS+ D+ AGR+PGYG+ TNIINGG+ECG+ +D V NRIGF+ Sbjct: 78 GGGGGGGAVEAVVSKELFEQLLLHRNDAACPARGFYTYDALVTAAAAFPDFAATGDDEARKREVAAFLGQTSHETTGGWATAPDGPYSWGYCFKEEIGATAS-YCVPSAEWPCAPDKKYFGRGPIQLSYNYNY--GPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTPQSPKPSCHDVITGQWTPSSGDIAAGRVPGYGVITNIINGGLECGFGPDDRVANRIGFY 303 The following BLAST results are available for this feature:
BLAST of FC929909 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929909 ID=FC929909; Name=FC929909; organism=Citrus clementina; type=EST; length=717bpback to top |