FC929910

Overview
NameFC929910
Unique NameFC929910
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14478 contig Ccv1_Contig14478:3..733. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929910 vs. ExPASy Swiss-Prot
Match: IN21B_ORYSJ (Protein IN2-1 homolog B OS=Oryza sativa subsp. japonica GN=GSTZ5 PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.238e-76
Identity = 137/216 (63.43%), Postives = 167/216 (77.31%), Query Frame = 1
Query:   82 ATTAQENLPPPLDSKAELPPLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLRDRPTWYKEKVYPVNKVPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKFADELFSHIDTFTNDVYTSF--KGDPAKQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNSSMLYS 723
            A++ +E LPP L S +E PPLFDGT RLY++Y CP+AQRAWI RNYKGLQDKIK+V ++L DRP WYKEKVYP NKVP+LEHN +V GESLDL+KY+D+NFEGP+LLPDD EK++FA+EL ++ D F    Y+S   KGD   +A  A D +E AL KF+DGPFFLGQFS VDIAY+PF+ERFQIF S    YDIT GRP L  +IEE+N    Y+
Sbjct:    9 ASSEKEVLPPSLTSSSEPPPLFDGTTRLYVAYHCPYAQRAWIARNYKGLQDKIKIVAIDLADRPAWYKEKVYPENKVPSLEHNNQVKGESLDLVKYIDTNFEGPALLPDDSEKQQFAEELLAYTDAFNKASYSSIVAKGDVCDEAVAALDKIEAALSKFNDGPFFLGQFSLVDIAYVPFIERFQIFFSGIKNYDITKGRPNLQKFIEEVNKIHAYT 224          
BLAST of FC929910 vs. ExPASy Swiss-Prot
Match: IN21B_ORYSI (Protein IN2-1 homolog B OS=Oryza sativa subsp. indica GN=GSTZ5 PE=1 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.238e-76
Identity = 137/216 (63.43%), Postives = 167/216 (77.31%), Query Frame = 1
Query:   82 ATTAQENLPPPLDSKAELPPLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLRDRPTWYKEKVYPVNKVPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKFADELFSHIDTFTNDVYTSF--KGDPAKQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNSSMLYS 723
            A++ +E LPP L S +E PPLFDGT RLY++Y CP+AQRAWI RNYKGLQDKIK+V ++L DRP WYKEKVYP NKVP+LEHN +V GESLDL+KY+D+NFEGP+LLPDD EK++FA+EL ++ D F    Y+S   KGD   +A  A D +E AL KF+DGPFFLGQFS VDIAY+PF+ERFQIF S    YDIT GRP L  +IEE+N    Y+
Sbjct:    9 ASSEKEVLPPSLTSSSEPPPLFDGTTRLYVAYHCPYAQRAWIARNYKGLQDKIKIVAIDLADRPAWYKEKVYPENKVPSLEHNNQVKGESLDLVKYIDTNFEGPALLPDDSEKQQFAEELLAYTDAFNKASYSSIVAKGDVCDEAVAALDKIEAALSKFNDGPFFLGQFSLVDIAYVPFIERFQIFFSGIKNYDITKGRPNLQKFIEEVNKIHAYT 224          
BLAST of FC929910 vs. ExPASy Swiss-Prot
Match: IN21A_ORYSJ (Protein IN2-1 homolog A OS=Oryza sativa subsp. japonica GN=Os03g0283200 PE=2 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 1.123e-69
Identity = 128/215 (59.53%), Postives = 161/215 (74.88%), Query Frame = 1
Query:   85 TTAQENLPPPLDSKAELPPLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLRDRPTWYKEKVYPVNKVPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKFADELFSHIDTFTNDVYTSF--KGDPAKQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNSSMLYS 723
            ++ +E LP  L S +E P LFDGT RLYI Y CPFAQRAWI RN+KGLQDKI+LV ++L+D+P WYKEKVY    VP+LEHNGK++GESLDLIKY+DS+FEGP+LLP+DPEKR+FADEL ++ + FT  +Y+    K D + +   A D +E AL KF DGPFFLGQFS VDIAY+  +ER QI+ S   KY+IT GRP L  +IEE+N    Y+
Sbjct:    9 SSGKEALPAALGSASEPPRLFDGTTRLYICYFCPFAQRAWIIRNFKGLQDKIELVGIDLQDKPAWYKEKVYEQGTVPSLEHNGKIMGESLDLIKYIDSHFEGPALLPEDPEKRQFADELIAYANAFTKALYSPLISKADLSAETVAALDKIEAALSKFGDGPFFLGQFSLVDIAYVTIIERIQIYYSHIRKYEITNGRPNLEKFIEEINRIEAYT 223          
BLAST of FC929910 vs. ExPASy Swiss-Prot
Match: IN21_MAIZE (Protein IN2-1 OS=Zea mays GN=IN2-1 PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 4.882e-65
Identity = 118/216 (54.63%), Postives = 156/216 (72.22%), Query Frame = 1
Query:   82 ATTAQENLPPPLDSKAELPPLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLRDRPTWYKEKVYPVNKVPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKFADELFSHIDTFTNDVYTSFKGDPA--KQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNSSMLYS 723
            +++ +E+LPP L S ++ PP+FDGT RLYI Y CPFAQRAW+TRN KGLQDK++LV ++L+D+P WYK+KVY    VP+LEH+ +V GESLDLI+Y+DSNF+GP+LLP+D  KR+FADELF+  + FT  +Y+      A   +   A D LE  L KFDDGPFFLGQFS  D+AY+  +ER QI+ S    YDI  GRP L  +I+E+N    Y+
Sbjct:    8 SSSVKESLPPALGSTSQPPPVFDGTTRLYICYFCPFAQRAWVTRNLKGLQDKMELVAIDLQDKPAWYKDKVYAQGTVPSLEHDSEVRGESLDLIRYIDSNFDGPALLPEDAAKRQFADELFASANAFTKALYSPLLSHAAVSDEVVAALDKLEADLSKFDDGPFFLGQFSLADVAYVTILERVQIYYSHLRNYDIAQGRPNLQEFIDEMNKIEAYA 223          
BLAST of FC929910 vs. ExPASy Swiss-Prot
Match: GSTO1_MOUSE (Glutathione S-transferase omega-1 OS=Mus musculus GN=Gsto1 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 7.397e-13
Identity = 64/209 (30.62%), Postives = 101/209 (48.33%), Query Frame = 1
Query:  139 PLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLRDRPTWYKEKVYPVNKVPALEHN-GKVIGESLDLIKYVDSNFEGPSLLPDDPEKR---KFADELFSHIDTFTNDVYTSFKGDPAKQAGPAF-DYLEKALDKFDDG----PFFLG--QFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNSS-MLYSHK 729
            P+ +G  R+Y    CPFAQR  +    KG++ ++  + +NL+++P W+ EK  P+  VP LE++ G ++ ES+   +Y+D  +    L PDDP K+   K   E FS +      +  SF     K+  P   + LE    K ++G      FLG    S VD    P+ +R +     E K +  A  PKL  W+  +    +  SHK
Sbjct:   18 PVPEGQIRVYSMRFCPFAQRTLMVLKAKGIRHEV--ININLKNKPEWFFEK-NPLGLVPVLENSQGHLVTESVITCEYLDEAYPEKKLFPDDPYKKARQKMTLESFSKVP----PLIASFVRSKRKEDSPNLREALENEFKKLEEGMDNYKSFLGGDSPSMVDYLTWPWFQRLEAL---ELK-ECLAHTPKLKLWMAAMQQDPVASSHK 215          
BLAST of FC929910 vs. ExPASy Swiss-Prot
Match: GSTO1_HUMAN (Glutathione S-transferase omega-1 OS=Homo sapiens GN=GSTO1 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 7.397e-13
Identity = 61/210 (29.05%), Postives = 101/210 (48.10%), Query Frame = 1
Query:  139 PLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLRDRPTWYKEKVYPVNKVPALEHN-GKVIGESLDLIKYVDSNFEGPSLLPDDPEKR---KFADELFSHIDTFTND-VYTSFKGDPA---KQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELN-----SSMLYSHK 729
            P+ +G+ R+Y    CPFA+R  +    KG++ ++  + +NL+++P W+ +K  P   VP LE++ G++I ES    +Y+D  + G  LLPDDP ++   K   ELFS + +     + +  K D A   ++    F  LE+ L       F     S +D    P+ ER +     E         PKL  W+  +      S++L S K
Sbjct:   18 PVPEGSIRIYSMRFCPFAERTRLVLKAKGIRHEV--ININLKNKPEWFFKK-NPFGLVPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELFSKVPSLVGSFIRSQNKEDYAGLKEEFRKEFTKLEEVLTNKKTTFFGGNSISMIDYLIWPWFERLEAMKLNE----CVDHTPKLKLWMAAMKEDPTVSALLTSEK 220          
BLAST of FC929910 vs. ExPASy Swiss-Prot
Match: GSTO1_RAT (Glutathione S-transferase omega-1 OS=Rattus norvegicus GN=Gsto1 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.648e-12
Identity = 63/207 (30.43%), Postives = 99/207 (47.83%), Query Frame = 1
Query:  139 PLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLRDRPTWYKEKVYPVNKVPALEH-NGKVIGESLDLIKYVDSNFEGPSLLPDDPEKR---KFADELFSHIDTFTNDVYTSFKGDPAKQAGPAF-DYLEKALDKFDDG------PFFLG-QFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNSSMLYS 723
            P+ +G  R+Y    CPFAQR  +    KG++ +I  + +NL+++P W+ EK  P   VP LE+  G +I ES+   +Y+D  +    L PDDP ++   K   ELFS + +    + TSF     K+  P   + L+K   K ++        FF G   S +D    P+ +R +     E   D T   PKL  W+  +    + S
Sbjct:   18 PVPEGQIRVYSMRFCPFAQRTLMVLKAKGIRHEI--ININLKNKPEWFFEK-NPFGLVPVLENTQGHLITESVITCEYLDEAYPEKKLFPDDPYEKACQKMTFELFSKVPS----LVTSFIRAKRKEDHPGIKEELKKEFSKLEEAMANKRTAFFGGNSLSMIDYLIWPWFQRLEALELNEC-IDHT---PKLKLWMATMQEDPVAS 213          
BLAST of FC929910 vs. ExPASy Swiss-Prot
Match: GSTO1_PIG (Glutathione S-transferase omega-1 OS=Sus scrofa GN=GSTO1 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 3.671e-12
Identity = 59/193 (30.57%), Postives = 92/193 (47.67%), Query Frame = 1
Query:  139 PLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLRDRPTWYKEKVYPVNKVPALEHN-GKVIGESLDLIKYVDSNFEGPSLLPDDPEKR---KFADELFSHID----TFTNDVYTSFKGDPAKQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWI 693
            P+ +G  R+Y    CPFAQR  +  N KG++ ++  + +NL+++P W+ +K  P   VP LE++ G++I ES    +Y+D  + G  LLPDDP ++   K   EL S +      F      +      ++    F  LE+ L K     F     S +D    P+ ER +     E   D T   PKL  W+
Sbjct:   18 PVPEGLIRVYSMRFCPFAQRTLLVLNAKGIRHQV--ININLKNKPEWFFQK-NPSGLVPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMVFELSSKVPPLLIRFIRRENEADCSGLKEELRKEFSKLEEVLTKKKTTYFGGSSLSMIDYLIWPWFERLEALELNEC-IDHT---PKLKLWM 203          
BLAST of FC929910 vs. ExPASy Swiss-Prot
Match: GSTO1_CAEEL (Glutathione transferase omega-1 OS=Caenorhabditis elegans GN=gsto-1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.262e-12
Identity = 62/205 (30.24%), Postives = 95/205 (46.34%), Query Frame = 1
Query:  136 PPLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLRDRPTWYKEKVYPVNKVPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDP----EKRKFADEL--FSHIDTFTNDVYTSFKGDPAKQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDITA-------GRPKLAAWIEELNSS 711
            PPL  G+ R+Y    CP+A+RA +    KG++ ++  V LN+ D+  WY  K Y   K PA+EHNGKV+ ES  + +Y+D  F    +LP DP    +++  AD L   +H       V         KQ    F+ L++A +   +  +   Q    D    PF E+     S +   D+           PKL  W +++ SS
Sbjct:   18 PPLSKGSFRVYNMRFCPWAERAMLYVAAKGIEAEV--VNLNVTDKLEWYWTKHYQ-GKAPAVEHNGKVVIESGFIPEYLDDAFPETRILPTDPYEKVQQKLLADRLTAVAHAVPLLFAVMRDRTLKDEKQR-KVFEVLKQAENLLANDFYAGSQPGYPDYLSFPFFEKIWWSASLDGVVDLPTIEFPGEEEYPKLTKWFQKMISS 218          
The following BLAST results are available for this feature:
BLAST of FC929910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
IN21B_ORYSJ1.238e-7663.43Protein IN2-1 homolog B OS=Oryza sativa subsp. jap... [more]
IN21B_ORYSI1.238e-7663.43Protein IN2-1 homolog B OS=Oryza sativa subsp. ind... [more]
IN21A_ORYSJ1.123e-6959.53Protein IN2-1 homolog A OS=Oryza sativa subsp. jap... [more]
IN21_MAIZE4.882e-6554.63Protein IN2-1 OS=Zea mays GN=IN2-1 PE=2 SV=1[more]
GSTO1_MOUSE7.397e-1330.62Glutathione S-transferase omega-1 OS=Mus musculus ... [more]
GSTO1_HUMAN7.397e-1329.05Glutathione S-transferase omega-1 OS=Homo sapiens ... [more]
GSTO1_RAT1.648e-1230.43Glutathione S-transferase omega-1 OS=Rattus norveg... [more]
GSTO1_PIG3.671e-1230.57Glutathione S-transferase omega-1 OS=Sus scrofa GN... [more]
GSTO1_CAEEL6.262e-1230.24Glutathione transferase omega-1 OS=Caenorhabditis ... [more]
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Properties
Property NameValue
Genbank descriptionC34001G05EF PostHarvC1 Citrus clementina cDNA clone C34001G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929910 ID=FC929910; Name=FC929910; organism=Citrus clementina; type=EST; length=730bp
GATTTCGGTATCAGGTAACTTTCTTCTTCAAAGCAAAAGAAAAGCTTTCA
GGAAACCTCTAGAGTCTTACCTTCCTCAATGGCAACCACAGCGCAAGAGA
ATCTCCCTCCACCGTTGGATTCGAAGGCCGAGCTACCACCTCTGTTCGAT
GGAACTCCCAGGTTGTACATTTCTTACTCGTGCCCATTTGCTCAGCGTGC
GTGGATCACCAGGAACTACAAGGGATTACAAGACAAGATTAAGTTAGTTC
CACTGAACCTCCGAGATAGGCCCACTTGGTACAAGGAGAAGGTTTATCCT
GTTAACAAGGTTCCAGCACTGGAGCACAATGGCAAAGTTATTGGAGAATC
TCTTGATTTGATTAAATATGTTGACAGCAATTTTGAAGGGCCTTCACTTT
TACCTGATGATCCTGAGAAACGAAAGTTTGCTGATGAACTGTTTTCCCAC
ATCGATACCTTCACCAACGATGTGTACACTTCATTCAAAGGAGACCCAGC
AAAACAAGCTGGTCCTGCTTTTGATTACTTAGAGAAGGCCCTTGATAAAT
TTGATGATGGCCCGTTCTTCCTTGGACAGTTCAGTCAGGTGGACATAGCC
TATATTCCATTTGTTGAGAGATTCCAGATCTTCTTATCAGAAGAATTTAA
GTATGACATCACTGCAGGCAGGCCTAAACTGGCAGCATGGATTGAGGAGT
TGAACAGCTCGATGCTTTACAGTCACAAAG
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