FC929947

Overview
NameFC929947
Unique NameFC929947
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length738
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929947 vs. ExPASy Swiss-Prot
Match: B3GTB_ARATH (Probable beta-1,3-galactosyltransferase 11 OS=Arabidopsis thaliana GN=B3GALT11 PE=2 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 6.669e-78
Identity = 128/176 (72.73%), Postives = 152/176 (86.36%), Query Frame = 3
Query:    3 DSLDQDIDSENKQTNDFFILDHHMEAPKEFPNKAKLFFAYAVDKWDAEYYAKVNDDVYVNIDSLGATLATHLDKPRVYIGCMKSGDVFSEPGHKWYEPDWWKFGDKKLYFRHASGEMYVISRALAKFISINRSILRTYAHDDVSAGSWFLGLDVKYLNEGKFCCSSWSSGAICAGV 530
            DS+D+ ID+EN QT+DF ILD  +EAP+E   K KLFFAYA D+WDA++YAK  D++YVNID+LG TLA HL+ PR YIGCMKSG+VFSEP HKWYEP+WWKFGDKK YFRHA GEMYVI+ ALA+F+SINR IL +YAHDDVS GSWF+GLDVK+++EGKFCCS+WSS AICAGV
Sbjct:  163 DSMDKSIDTENSQTDDFIILDDVVEAPEEASKKVKLFFAYAADRWDAQFYAKAIDNIYVNIDALGTTLAAHLENPRAYIGCMKSGEVFSEPNHKWYEPEWWKFGDKKAYFRHAYGEMYVITHALARFVSINRDILHSYAHDDVSTGSWFVGLDVKHVDEGKFCCSAWSSEAICAGV 338          
BLAST of FC929947 vs. ExPASy Swiss-Prot
Match: B3GTA_ARATH (Probable beta-1,3-galactosyltransferase 10 OS=Arabidopsis thaliana GN=B3GALT10 PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.388e-51
Identity = 84/174 (48.28%), Postives = 124/174 (71.26%), Query Frame = 3
Query:    3 DSLDQDIDSENKQTNDFFILDHHMEAPKEFPNKAKLFFAYAVDKWDAEYYAKVNDDVYVNIDSLGATLATHLDKPRVYIGCMKSGDVFSEPGHKWYEPDWWKFGDKKLYFRHASGEMYVISRALAKFISINRSILRTYAHDDVSAGSWFLGLDVKYLNEGKFCCSSWSSGAICA 524
            DSLD+ ID EN+ T DF IL++H EA +E P K K F++ AV  WDAE+Y KV+D+V ++++ + A L +   +   YIGCMKSGDV +E G +WYEP+WWKFGD K YFRHA+G + ++S+ LA++++IN  +L+TYA DD + GSW +G+   Y+++ + CCSS     +C+
Sbjct:  170 DSLDRKIDEENRATKDFLILENHEEAQEELPKKVKFFYSAAVQNWDAEFYVKVDDNVDLDLEGMIALLESRRSQDGAYIGCMKSGDVITEEGSQWYEPEWWKFGDDKSYFRHATGSLVILSKNLAQYVNINSGLLKTYAFDDTTIGSWMIGVQATYIDDNRLCCSSTRQEKVCS 343          
BLAST of FC929947 vs. ExPASy Swiss-Prot
Match: B3GT9_ARATH (Probable beta-1,3-galactosyltransferase 9 OS=Arabidopsis thaliana GN=B3GALT9 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.311e-49
Identity = 83/174 (47.70%), Postives = 121/174 (69.54%), Query Frame = 3
Query:    3 DSLDQDIDSENKQTNDFFILDHHMEAPKEFPNKAKLFFAYAVDKWDAEYYAKVNDDVYVNIDSLGATLATHLDKPRVYIGCMKSGDVFSEPGHKWYEPDWWKFGDKKLYFRHASGEMYVISRALAKFISINRSILRTYAHDDVSAGSWFLGLDVKYLNEGKFCCSSWSSGAICA 524
            DSLD+ ID EN+   DF IL++H EA +E   K K FF+ AV  WDAE+Y KV+D++ ++++ L   L +   +   YIGCMKSG+V +E G KWYEP+WWKFGD+K YFRHA+G + ++S+ LA++++IN   L+TYA DD S GSW +G+   Y+++ + CCSS     +C+
Sbjct:  171 DSLDRKIDEENQARKDFLILENHEEAQEELAKKVKFFFSAAVQNWDAEFYIKVDDNIDLDLEGLIGLLESRRGQDAAYIGCMKSGEVVAEEGGKWYEPEWWKFGDEKSYFRHAAGSLLILSKTLAQYVNINSGSLKTYAFDDTSIGSWMIGVQATYIDDNRLCCSSIRQDKVCS 344          
BLAST of FC929947 vs. ExPASy Swiss-Prot
Match: B3GT6_ARATH (Probable beta-1,3-galactosyltransferase 6 OS=Arabidopsis thaliana GN=B3GALT6 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.506e-48
Identity = 86/165 (52.12%), Postives = 126/165 (76.36%), Query Frame = 3
Query:    9 LDQDIDSENKQTNDFFILDHHMEAPKEFPNKAKLFFAYAVDKWDAEYYAKVNDDVYVNIDSLGATLATHLDKPRVYIGCMKSGDVFSEPGHKWYEPDWWKFGDK-KLYFRHASGEMYVISRALAKFISINRSILRTYAHDDVSAGSWFLGLDVKYLNEGKFCCSS 500
            LD  I++E +Q  DFF L+H +E   E  +K +++F+ AV KWDA++Y KV+DDV+VN+  LG+TLA H  KPRVYIGCMKSG V ++ G K++EP++WKFG++   YFRHA+G++Y IS+ LA +IS+NR +L  YA++DVS GSWF+GLDV+++++   CC +
Sbjct:  185 LDHTIEAEEEQHKDFFRLNH-IEGYHELSSKTQIYFSSAVAKWDADFYIKVDDDVHVNLGMLGSTLARHRSKPRVYIGCMKSGPVLAQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISVNRQLLHKYANEDVSLGSWFIGLDVEHIDDRSLCCGT 348          
BLAST of FC929947 vs. ExPASy Swiss-Prot
Match: B3GT5_ARATH (Probable beta-1,3-galactosyltransferase 5 OS=Arabidopsis thaliana GN=B3GALT5 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 7.951e-47
Identity = 88/165 (53.33%), Postives = 124/165 (75.15%), Query Frame = 3
Query:    9 LDQDIDSENKQTNDFFILDHHMEAPKEFPNKAKLFFAYAVDKWDAEYYAKVNDDVYVNIDSLGATLATHLDKPRVYIGCMKSGDVFSEPGHKWYEPDWWKFGDK-KLYFRHASGEMYVISRALAKFISINRSILRTYAHDDVSAGSWFLGLDVKYLNEGKFCCSS 500
            LD++IDSE+ Q NDFF LDH +E       K K FF+ AV KWDAE+Y K++DDV+VN+ +L +TLA+H  KPRVYIGCMKSG V ++   K+ EP++WKFG++   YFRHA+G++Y IS+ LA +IS N+ IL  YA++DV+ GSWF+GL+V+ +++  FCC +
Sbjct:  181 LDKEIDSEDAQYNDFFRLDH-VEGYYNLSAKTKSFFSSAVAKWDAEFYVKIDDDVHVNLGTLASTLASHRSKPRVYIGCMKSGPVLTKKTAKYREPEFWKFGEEGNKYFRHATGQIYAISKDLATYISNNQPILHKYANEDVTLGSWFIGLEVEQIDDRNFCCGT 344          
BLAST of FC929947 vs. ExPASy Swiss-Prot
Match: B3GT2_ARATH (Probable beta-1,3-galactosyltransferase 2 OS=Arabidopsis thaliana GN=B3GALT2 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.313e-46
Identity = 84/165 (50.91%), Postives = 122/165 (73.94%), Query Frame = 3
Query:    9 LDQDIDSENKQTNDFFILDHHMEAPKEFPNKAKLFFAYAVDKWDAEYYAKVNDDVYVNIDSLGATLATHLDKPRVYIGCMKSGDVFSEPGHKWYEPDWWKFGDK-KLYFRHASGEMYVISRALAKFISINRSILRTYAHDDVSAGSWFLGLDVKYLNEGKFCCSS 500
            LD+ I++E+++  DF  LDH +E   E   K K +F+ A   WDA++Y KV+DDV+VNI +LG TL  H  KPRVYIGCMKSG V S+ G +++EP++WKFG+    YFRHA+G++Y ISR LA +ISIN+ +L  YA++DVS G+WF+G+DVK++++ + CC +
Sbjct:  193 LDRAIEAEDRKHGDFLRLDH-VEGYLELSGKTKTYFSTAFSMWDADFYVKVDDDVHVNIATLGETLVRHRKKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGENGNKYFRHATGQLYAISRDLASYISINQHVLHKYANEDVSLGAWFIGIDVKHIDDRRLCCGT 356          
BLAST of FC929947 vs. ExPASy Swiss-Prot
Match: B3GT3_ARATH (Probable beta-1,3-galactosyltransferase 3 OS=Arabidopsis thaliana GN=B3GALT3 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.021e-46
Identity = 84/165 (50.91%), Postives = 122/165 (73.94%), Query Frame = 3
Query:    9 LDQDIDSENKQTNDFFILDHHMEAPKEFPNKAKLFFAYAVDKWDAEYYAKVNDDVYVNIDSLGATLATHLDKPRVYIGCMKSGDVFSEPGHKWYEPDWWKFGDK-KLYFRHASGEMYVISRALAKFISINRSILRTYAHDDVSAGSWFLGLDVKYLNEGKFCCSS 500
            LD+ I++E+K+  DF  LDH +E   E   K K +F+ AV KWDAE+Y KV+DDV+VNI +LG TL  H  K RVY+GCMKSG V S+ G +++EP++WKFG+    YFRHA+G++Y ISR LA +IS+N+ +L  YA++DV+ G+WF+GLDV ++++ + CC +
Sbjct:  195 LDRSIEAEDKKHGDFLRLDH-VEGYLELSGKTKTYFSTAVSKWDAEFYVKVDDDVHVNIATLGETLVRHRKKHRVYLGCMKSGPVLSQKGVRYHEPEYWKFGENGNKYFRHATGQLYAISRDLASYISLNQHVLHKYANEDVTLGAWFIGLDVTHIDDRRLCCGT 358          
BLAST of FC929947 vs. ExPASy Swiss-Prot
Match: B3GT7_ARATH (Beta-1,3-galactosyltransferase 7 OS=Arabidopsis thaliana GN=B3GALT7 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.958e-45
Identity = 90/171 (52.63%), Postives = 123/171 (71.93%), Query Frame = 3
Query:    9 LDQDIDSENKQTNDFFILDHHMEAPKEFPNKAKLFFAYAVDKWDAEYYAKVNDDVYVNIDSLGATLATHLDKPRVYIGCMKSGDVFSE------PGHKWYEPDWWKFG-DKKLYFRHASGEMYVISRALAKFISINRSILRTYAHDDVSAGSWFLGLDVKYLNEGKFCCSS 500
            LD+ IDSE+ Q  DF  L+H +E   E   K K+FF+ AV KWDAE+Y KV+DDV+VN+  L +TLA H  KPRVYIGCMKSG V ++         K++EP++WKFG D   YFRHA+G++Y IS+ LA +ISIN+ IL  YA++DVS GSWF+GL+V+++++  FCC +
Sbjct:  173 LDRAIDSEDAQHKDFLRLEH-VEGYHELSAKTKIFFSTAVAKWDAEFYIKVDDDVHVNLGMLASTLARHRSKPRVYIGCMKSGPVLAQNLLNCFRTVKYHEPEYWKFGEDGNKYFRHATGQIYAISKDLANYISINQPILHKYANEDVSLGSWFIGLEVEHIDDRNFCCGT 342          
BLAST of FC929947 vs. ExPASy Swiss-Prot
Match: B3GT4_ARATH (Probable beta-1,3-galactosyltransferase 4 OS=Arabidopsis thaliana GN=B3GALT4 PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.269e-44
Identity = 88/178 (49.44%), Postives = 125/178 (70.22%), Query Frame = 3
Query:    9 LDQDIDSENKQTNDFFILDHHMEAPKEFPNKAKLFFAYAVDKWDAEYYAKVNDDVYVNIDSLGATLATHLDKPRVYIGCMKSGDVFSEPGHKWYEPDWWKFGDK-KLYFRHASGEMYVISRALAKFISINRSILRTYAHDDVSAGSWFLGLDVKYLNEGKFCCSS----W--SSGAIC 521
            LD+ I +E  +  DF  LDH +E   E   K K +F  A   WDA++Y KV+DDV+VNI +LGA LA +  KPRVYIGCMKSG V ++ G +++EP++WKFG++   YFRHA+G++Y ISR LA +ISIN+++L  Y ++DVS GSWFLGLDV+++++ + CC +    W   +G IC
Sbjct:  194 LDRAIQAEESKHGDFLRLDH-VEGYLELSAKTKTYFTTAFAMWDADFYVKVDDDVHVNIATLGAELARYRMKPRVYIGCMKSGPVLAQKGVRYHEPEYWKFGEEGNKYFRHATGQLYAISRELASYISINQNVLHKYVNEDVSLGSWFLGLDVEHVDDRRLCCGTTDCEWKAQAGNIC 370          
BLAST of FC929947 vs. ExPASy Swiss-Prot
Match: B3GT1_ARATH (Probable beta-1,3-galactosyltransferase 1 OS=Arabidopsis thaliana GN=B3GALT1 PE=2 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 4.084e-43
Identity = 83/165 (50.30%), Postives = 117/165 (70.91%), Query Frame = 3
Query:    9 LDQDIDSENKQTNDFFILDHHMEAPKEFPNKAKLFFAYAVDKWDAEYYAKVNDDVYVNIDSLGATLATHLDKPRVYIGCMKSGDVFSEPGHKWYEPDWWKFGD-KKLYFRHASGEMYVISRALAKFISINRSILRTYAHDDVSAGSWFLGLDVKYLNEGKFCCSS 500
            LD+ I++E K   DF  L+H  E   +   K K FFA AV  WDAE+Y KV+DDV+VN+ SL   L+ H +KPRVY+GCMKSG V +    K++EP++WKFG+    YFRHA+G+ Y IS+ LA +I IN+ +L  YA++DVS GSWF+GL+V++++E + CCS+
Sbjct:  170 LDKAIEAEEKTHGDFLRLEH-TEGYMKLSAKTKTFFATAVSLWDAEFYIKVDDDVHVNLASLKKALSAHQNKPRVYVGCMKSGPVLARKSVKYHEPEYWKFGEVGNKYFRHATGQFYAISKDLATYILINQDLLHKYANEDVSLGSWFIGLNVEHVDEKRLCCST 333          
The following BLAST results are available for this feature:
BLAST of FC929947 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
B3GTB_ARATH6.669e-7872.73Probable beta-1,3-galactosyltransferase 11 OS=Arab... [more]
B3GTA_ARATH2.388e-5148.28Probable beta-1,3-galactosyltransferase 10 OS=Arab... [more]
B3GT9_ARATH1.311e-4947.70Probable beta-1,3-galactosyltransferase 9 OS=Arabi... [more]
B3GT6_ARATH5.506e-4852.12Probable beta-1,3-galactosyltransferase 6 OS=Arabi... [more]
B3GT5_ARATH7.951e-4753.33Probable beta-1,3-galactosyltransferase 5 OS=Arabi... [more]
B3GT2_ARATH2.313e-4650.91Probable beta-1,3-galactosyltransferase 2 OS=Arabi... [more]
B3GT3_ARATH3.021e-4650.91Probable beta-1,3-galactosyltransferase 3 OS=Arabi... [more]
B3GT7_ARATH1.958e-4552.63Beta-1,3-galactosyltransferase 7 OS=Arabidopsis th... [more]
B3GT4_ARATH1.269e-4449.44Probable beta-1,3-galactosyltransferase 4 OS=Arabi... [more]
B3GT1_ARATH4.084e-4350.30Probable beta-1,3-galactosyltransferase 1 OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionC34002B06EF PostHarvC1 Citrus clementina cDNA clone C34002B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929947 ID=FC929947; Name=FC929947; organism=Citrus clementina; type=EST; length=738bp
GGGACAGTTTGGACCAGGATATTGACAGTGAAAATAAGCAGACAAATGAC
TTCTTCATTCTTGATCACCACATGGAGGCACCTAAAGAATTCCCAAATAA
GGCTAAGTTGTTCTTTGCTTATGCTGTGGATAAGTGGGATGCGGAATATT
ATGCTAAAGTCAATGACGATGTATATGTGAATATTGATTCCTTGGGAGCT
ACCCTTGCTACTCATTTGGACAAACCTCGTGTTTATATTGGGTGTATGAA
ATCTGGCGACGTTTTCTCTGAACCAGGCCATAAATGGTATGAACCAGATT
GGTGGAAGTTTGGCGATAAGAAATTATACTTCCGCCATGCATCTGGTGAG
ATGTATGTCATATCACGAGCTCTGGCTAAATTCATATCAATAAACAGATC
CATACTCCGCACCTATGCCCATGATGATGTTAGTGCTGGATCCTGGTTTC
TCGGGCTTGATGTCAAATATCTAAATGAAGGAAAGTTTTGCTGCTCCTCT
TGGTCATCAGGAGCTATCTGCGCAGGAGTTTAATTTAGTTTGGCATCAAC
ATCCCAGGAGGCAGGTATAGACCTGATATTAACAAAGTTTTGGGGGAAGA
TGCCATATTTGACTTGCATTGTTGCAGTTTGCTTTACACAAACATTTCTC
TTATGAAGTTGCTTATAGGCTTCCCATCTGTTCGATAGAAATTGATTACC
CAAAGACAGGAACACAGTGTGTCCCAGAAGAAGCTACT
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