FC930005
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930005 vs. ExPASy Swiss-Prot
Match: STHY_ARATH (Probable salt tolerance-like protein At1g78600 OS=Arabidopsis thaliana GN=At1g78600 PE=1 SV=2) HSP 1 Score: 198.364 bits (503), Expect = 2.935e-50 Identity = 111/236 (47.03%), Postives = 141/236 (59.75%), Query Frame = 1 Query: 1 EAAEAKVPCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVGLEPADPGAXXXXXXXXXGENILDMKSHSLSRRDAL---------MPVAAECKEVLPASSGGVGDFAMNKVSF-AGGSAAGSTPSWHMDDFLALPELNQNYSFMD-NXXXXXXXXXXXXXXXXXILRSAEE-RLDDDECL 672 EAAEA V CCADEAALCW CD+K+HAANKLA KHQRVPLS+S++ +PKCDICQE SGFFFCLQDRALLCRKCDVAIHT N +VSAHQRFLLTG+KVGLE D G + ++ K S + + + V+P + V D K+ + GS GS P W +++ L + +Q+Y +M+ N ++RSAEE D++ CL Sbjct: 9 EAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDICQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTG-PSTKSSPTNDDKTMETKPFVQSIPEPQKMAFDHHHHQQQQEQQEGVIPGTK--VNDQTSTKLPLVSSGSTTGSIPQWQIEEIFGLTDFDQSYEYMENNGSSKADTSRRGDSDSSSMMRSAEEDGEDNNNCL 241
BLAST of FC930005 vs. ExPASy Swiss-Prot
Match: STO_ARATH (Salt tolerance protein OS=Arabidopsis thaliana GN=STO PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 7.262e-33 Identity = 65/98 (66.33%), Postives = 78/98 (79.59%), Query Frame = 1 Query: 1 EAAEAKVPCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVGL 294 E A A V CCADEAALC +CD ++HAANKLASKHQR+ L+S ST+ P+CDICQE + F FC++DRALLCR CD +IH ANS + HQRFL TG+KV L Sbjct: 9 EKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDICQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVAL 106
BLAST of FC930005 vs. ExPASy Swiss-Prot
Match: STH_ARATH (Salt tolerance-like protein OS=Arabidopsis thaliana GN=STH PE=1 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 1.282e-29 Identity = 61/98 (62.24%), Postives = 73/98 (74.49%), Query Frame = 1 Query: 1 EAAEAKVPCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVGL 294 E A A + CCADEAALC +CD +VHAANKLASKHQR+ L S ST+ P CDIC E + F FC++DRALLCR CD A H N+ + HQRFL TG++V L Sbjct: 9 EKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDICLEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVAL 106
BLAST of FC930005 vs. ExPASy Swiss-Prot
Match: STHX_ARATH (Probable salt tolerance-like protein At1g75540 OS=Arabidopsis thaliana GN=At1g75540 PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.417e-28 Identity = 74/184 (40.22%), Postives = 97/184 (52.72%), Query Frame = 1 Query: 10 EAKVPCCADEAALCWECDDKVHAANKLASKHQRVPL---SSSSTQMPKCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVGLEPADPGAXXXXXXXXXGENILDMKSHSLSRRDAL-MPVAA--ECKEVLPASSGGVGDFAMNK---VSFAGGSAAGSTPSWHMDDFL 534 EA V C ADEA+LC CD +VH ANKLASKH R L SSS+T P CDICQ+ FC QDRA+LC+ CD +IH AN + H RFLLTGVK+ + + S+S L P++A + ++ P S GD ++N+ S + P WH++DFL Sbjct: 12 EASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLCDICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSKSSSSSSSNQDFSVPGSSISNPPPLKKPLSAPPQSNKIQPFSKINGGDASVNQWGSTSTISEYLMDTLPGWHVEDFL 195
BLAST of FC930005 vs. ExPASy Swiss-Prot
Match: COL1_ARATH (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.682e-13 Identity = 39/87 (44.83%), Postives = 47/87 (54.02%), Query Frame = 1 Query: 4 AAEAKVPCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQR 264 +A V C AD A LC CD +VHAAN+LAS+H+RV + C C+ FFC D A LC CD IH+AN HQR Sbjct: 17 SAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRV---------CQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQR 94
BLAST of FC930005 vs. ExPASy Swiss-Prot
Match: COL3_ARATH (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.391e-13 Identity = 39/101 (38.61%), Postives = 54/101 (53.47%), Query Frame = 1 Query: 1 EAAEAKVPCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVGLEPA 303 ++ A + C AD A LC +CD K+H ANKLAS+H+RV L C++C++ C D A LC CD IH+AN H+R +T + PA Sbjct: 12 KSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWL---------CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVGPA 103
BLAST of FC930005 vs. ExPASy Swiss-Prot
Match: COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.090e-12 Identity = 38/92 (41.30%), Postives = 50/92 (54.35%), Query Frame = 1 Query: 1 EAAEAKVPCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLT 276 ++A A + C D A LC CD KVHAANKLAS+H RV + C++C++ C D A LC CD IH+AN H+R +T Sbjct: 10 KSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWM---------CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVT 92
BLAST of FC930005 vs. ExPASy Swiss-Prot
Match: COL2_ARATH (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.090e-12 Identity = 37/87 (42.53%), Postives = 46/87 (52.87%), Query Frame = 1 Query: 4 AAEAKVPCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQR 264 +A V C AD A LC CD +VHAAN++AS+H+RV + C C+ F C D A LC CD IH+AN HQR Sbjct: 21 SAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRV---------CQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQR 98
BLAST of FC930005 vs. ExPASy Swiss-Prot
Match: CONS_ARATH (Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.229e-12 Identity = 34/82 (41.46%), Postives = 45/82 (54.88%), Query Frame = 1 Query: 19 VPCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQR 264 V C AD A LC CD +VH+AN++AS+H+RV + C+ C+ F C D A LC CD +H+AN HQR Sbjct: 30 VYCHADSAYLCMSCDAQVHSANRVASRHKRVRV---------CESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQR 102 The following BLAST results are available for this feature:
BLAST of FC930005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930005 ID=FC930005; Name=FC930005; organism=Citrus clementina; type=EST; length=673bpback to top |