FC930012

Overview
NameFC930012
Unique NameFC930012
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12949 contig Ccv1_Contig12949:129..828. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930012 vs. ExPASy Swiss-Prot
Match: GMPPB_DICDI (Mannose-1-phosphate guanyltransferase beta OS=Dictyostelium discoideum GN=gmppB PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.492e-65
Identity = 124/172 (72.09%), Postives = 147/172 (85.47%), Query Frame = 1
Query:  163 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEKP*LFVGNKI 678
            MKALILVGGFGTRLRPLTLS PKP+VEFANK MILHQIEAL  +GV EVVLA+NY+P++M  +L+ +E KLGIKI  S ET PLGTAGPLALARD L D  GEPFFVLNSD+I ++PFA+++ FHK+HGGE +IMVTKV+EPSKYGVVV +E  G++ KFVEKP ++VGNKI
Sbjct:    1 MKALILVGGFGTRLRPLTLSKPKPIVEFANKAMILHQIEALCKIGVNEVVLAVNYRPQLMSQYLEPYEKKLGIKISYSHETVPLGTAGPLALARDLLND--GEPFFVLNSDIICDFPFADLLAFHKSHGGEGTIMVTKVEEPSKYGVVVYKEENGQILKFVEKPQVYVGNKI 170          
BLAST of FC930012 vs. ExPASy Swiss-Prot
Match: MPG1_YARLI (Mannose-1-phosphate guanyltransferase OS=Yarrowia lipolytica GN=MPG1 PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.589e-60
Identity = 115/173 (66.47%), Postives = 142/173 (82.08%), Query Frame = 1
Query:  163 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLI-DDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEKP*LFVGNKI 678
            MK LILVGG+GTRLRPLTL++PKPLVEF NKPMILHQ+E+L A GV ++VLA+NY+PEVM+  LK++E K G+ I  S ETEPLGTAGPL LA + L  DDT  PFFVLNSDVI +YPFAE+ EFHK +  EA+I+ TKV+EPSKYGV+V ++ T K+++FVEKP  FVGN+I
Sbjct:    1 MKGLILVGGYGTRLRPLTLTLPKPLVEFGNKPMILHQVESLAAAGVKDIVLAVNYRPEVMIETLKKYEEKYGVNITFSVETEPLGTAGPLKLAEEILCKDDT--PFFVLNSDVICDYPFAELAEFHKKNNAEATIVATKVEEPSKYGVIVHKQGTSKIDRFVEKPVEFVGNRI 171          
BLAST of FC930012 vs. ExPASy Swiss-Prot
Match: MPG12_CANGA (Mannose-1-phosphate guanyltransferase 2 OS=Candida glabrata GN=MPG1 PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 4.417e-60
Identity = 115/173 (66.47%), Postives = 141/173 (81.50%), Query Frame = 1
Query:  163 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEEST-GKVEKFVEKP*LFVGNKI 678
            MK LILVGG+GTRLRPLTLSVPKPLVEF N+PMILHQIEAL   GVT++VLA+NY+PEVM++ LK++E + G+ I  S ETEPLGTAGPL LA +K++     PFFVLNSDVI EYPF E+ EFHK+HGG+ +I+ TKVDEPSKYGV+V +  T   +++FVEKP  FVGN+I
Sbjct:    1 MKGLILVGGYGTRLRPLTLSVPKPLVEFCNRPMILHQIEALAEAGVTDIVLAVNYRPEVMVDTLKKYEKEYGVNITFSVETEPLGTAGPLKLA-EKILKKDNSPFFVLNSDVICEYPFKELAEFHKSHGGKGTIVATKVDEPSKYGVIVHDLGTPNLIDRFVEKPKEFVGNRI 172          
BLAST of FC930012 vs. ExPASy Swiss-Prot
Match: MPG1_SCHPO (Mannose-1-phosphate guanyltransferase OS=Schizosaccharomyces pombe GN=mpg1 PE=2 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 5.768e-60
Identity = 118/173 (68.21%), Postives = 139/173 (80.35%), Query Frame = 1
Query:  163 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVV-TEESTGKVEKFVEKP*LFVGNKI 678
            MKALILVGGFGTRLRPLTL++PKPLVEF NKPMILHQ+EAL A GVT++VLA+NY+PE+M+  LK++E +  + I  S E EPLGTAGPLALARD L  D   PFFVLNSDVI EYPFA++  FHKAHG E +I+VTKV+EPSKYGVVV    S   +E+FVEKP  FV N+I
Sbjct:    1 MKALILVGGFGTRLRPLTLTLPKPLVEFGNKPMILHQVEALAAAGVTDIVLAVNYRPEIMVEALKKYEKEYNVNITFSVENEPLGTAGPLALARDILAKD-HSPFFVLNSDVICEYPFADLAAFHKAHGAEGTIVVTKVEEPSKYGVVVHYPNSESLIERFVEKPVEFVSNRI 172          
BLAST of FC930012 vs. ExPASy Swiss-Prot
Match: MPG1_YEAST (Mannose-1-phosphate guanyltransferase OS=Saccharomyces cerevisiae GN=MPG1 PE=1 SV=2)

HSP 1 Score: 230.335 bits (586), Expect = 7.534e-60
Identity = 116/173 (67.05%), Postives = 140/173 (80.92%), Query Frame = 1
Query:  163 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEEST-GKVEKFVEKP*LFVGNKI 678
            MK LILVGG+GTRLRPLTL+VPKPLVEF N+PMILHQIEAL   GVT++VLA+NY+PEVM+  LK++E + G+ I  S ETEPLGTAGPL LA D L  D   PFFVLNSDVI EYPF E+ +FHKAHGG+ +I+ TKVDEPSKYGV+V + +T   +++FVEKP  FVGN+I
Sbjct:    1 MKGLILVGGYGTRLRPLTLTVPKPLVEFGNRPMILHQIEALANAGVTDIVLAVNYRPEVMVETLKKYEKEYGVNITFSVETEPLGTAGPLKLAEDVLKKD-NSPFFVLNSDVICEYPFKELADFHKAHGGKGTIVATKVDEPSKYGVIVHDIATPNLIDRFVEKPKEFVGNRI 172          
BLAST of FC930012 vs. ExPASy Swiss-Prot
Match: MPG1_ASHGO (Mannose-1-phosphate guanyltransferase OS=Ashbya gossypii GN=MPG1 PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.678e-59
Identity = 114/173 (65.90%), Postives = 141/173 (81.50%), Query Frame = 1
Query:  163 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEEST-GKVEKFVEKP*LFVGNKI 678
            MK LILVGG+GTRLRPLTL+VPKPLVEF N+PMILHQIEAL A GVT++VLA+NY+PEVM+  LK++E + G+ I  S ETEPLGTAGPL LA +K++     PFFVLNSDVI EYPF E+  FH+AHGG+ +I+ TKVDEPSKYGV+V + +T   +++FVEKP  FVGN+I
Sbjct:    1 MKGLILVGGYGTRLRPLTLTVPKPLVEFCNRPMILHQIEALAAAGVTDIVLAVNYRPEVMVETLKKYEKQYGVSITFSVETEPLGTAGPLKLA-EKVLKKDNSPFFVLNSDVICEYPFKELAAFHRAHGGKGTIVATKVDEPSKYGVIVHDIATPNLIDRFVEKPVEFVGNRI 172          
BLAST of FC930012 vs. ExPASy Swiss-Prot
Match: GMPPB_PIG (Mannose-1-phosphate guanyltransferase beta OS=Sus scrofa GN=GMPPB PE=1 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.678e-59
Identity = 111/172 (64.53%), Postives = 140/172 (81.40%), Query Frame = 1
Query:  163 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEKP*LFVGNKI 678
            MKALILVGG+GTRLRPLTLS+PKPLV+F NKP++LHQ+EAL + GV  V+LA++Y  +++   +K  E +LGI+I  S E EPLGTAGPLALARD L+ +T EPFFVLNSDVI ++PF  M++FH+ HG E SI+VTKV+EPSKYGVVV E  TG++ +FVEKP +FV NKI
Sbjct:    1 MKALILVGGYGTRLRPLTLSIPKPLVDFCNKPILLHQVEALASAGVDHVILAVSYMSQMLEKEMKAQEQRLGIRISMSHEEEPLGTAGPLALARD-LLSETAEPFFVLNSDVICDFPFQAMVQFHRHHGQEGSILVTKVEEPSKYGVVVCEADTGRIHRFVEKPQVFVSNKI 171          
BLAST of FC930012 vs. ExPASy Swiss-Prot
Match: GMPPB_HUMAN (Mannose-1-phosphate guanyltransferase beta OS=Homo sapiens GN=GMPPB PE=1 SV=2)

HSP 1 Score: 229.18 bits (583), Expect = 1.678e-59
Identity = 112/172 (65.12%), Postives = 139/172 (80.81%), Query Frame = 1
Query:  163 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEKP*LFVGNKI 678
            MKALILVGG+GTRLRPLTLS PKPLV+F NKP++LHQ+EAL A GV  V+LA++Y  +V+   +K  E +LGI+I  S E EPLGTAGPLALARD L+ +T +PFFVLNSDVI ++PF  M++FH+ HG E SI+VTKV+EPSKYGVVV E  TG++ +FVEKP +FV NKI
Sbjct:    1 MKALILVGGYGTRLRPLTLSTPKPLVDFCNKPILLHQVEALAAAGVDHVILAVSYMSQVLEKEMKAQEQRLGIRISMSHEEEPLGTAGPLALARD-LLSETADPFFVLNSDVICDFPFQAMVQFHRHHGQEGSILVTKVEEPSKYGVVVCEADTGRIHRFVEKPQVFVSNKI 171          
BLAST of FC930012 vs. ExPASy Swiss-Prot
Match: GMPPB_BOVIN (Mannose-1-phosphate guanyltransferase beta OS=Bos taurus GN=GMPPB PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.678e-59
Identity = 113/172 (65.70%), Postives = 139/172 (80.81%), Query Frame = 1
Query:  163 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEKP*LFVGNKI 678
            MKALILVGG+GTRLRPLTLS+PKPL +F NKP++LHQ+EAL A GV  V+LA++Y  +V+   +K  E KLGI+I  S E EPLGTAGPLALARD L+ +T +PFFVLNSDVI ++PF  M++FH+ HG E SI+VTKV+EPSKYGVVV E  TG+V +FVEKP +FV NKI
Sbjct:    1 MKALILVGGYGTRLRPLTLSIPKPLADFCNKPILLHQVEALAAAGVDHVILAVSYMSQVLEKEMKAQEQKLGIRISMSHEEEPLGTAGPLALARD-LLCETADPFFVLNSDVICDFPFEAMVQFHRHHGQEGSILVTKVEEPSKYGVVVCEADTGRVHRFVEKPQVFVSNKI 171          
BLAST of FC930012 vs. ExPASy Swiss-Prot
Match: GMPPB_MOUSE (Mannose-1-phosphate guanyltransferase beta OS=Mus musculus GN=Gmppb PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 3.739e-59
Identity = 111/172 (64.53%), Postives = 139/172 (80.81%), Query Frame = 1
Query:  163 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEKP*LFVGNKI 678
            MKALILVGG+GTRLRPLTLS PKPLV+F NKP++LHQ+EAL A GV  V+LA++Y  +++   +K  E +LGI+I  S E EPLGTAGPLALARD L+ +T +PFFVLNSDVI ++PF  M++FH+ HG E SI+VTKV+EPSKYGVVV E  TG++ +FVEKP +FV NKI
Sbjct:    1 MKALILVGGYGTRLRPLTLSTPKPLVDFCNKPILLHQVEALAAAGVDHVILAVSYMSQMLEKEMKAQEQRLGIRISMSHEEEPLGTAGPLALARD-LLSETADPFFVLNSDVICDFPFQAMVQFHRHHGQEGSILVTKVEEPSKYGVVVCEADTGRIHRFVEKPQVFVSNKI 171          
The following BLAST results are available for this feature:
BLAST of FC930012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
GMPPB_DICDI3.492e-6572.09Mannose-1-phosphate guanyltransferase beta OS=Dict... [more]
MPG1_YARLI2.589e-6066.47Mannose-1-phosphate guanyltransferase OS=Yarrowia ... [more]
MPG12_CANGA4.417e-6066.47Mannose-1-phosphate guanyltransferase 2 OS=Candida... [more]
MPG1_SCHPO5.768e-6068.21Mannose-1-phosphate guanyltransferase OS=Schizosac... [more]
MPG1_YEAST7.534e-6067.05Mannose-1-phosphate guanyltransferase OS=Saccharom... [more]
MPG1_ASHGO1.678e-5965.90Mannose-1-phosphate guanyltransferase OS=Ashbya go... [more]
GMPPB_PIG1.678e-5964.53Mannose-1-phosphate guanyltransferase beta OS=Sus ... [more]
GMPPB_HUMAN1.678e-5965.12Mannose-1-phosphate guanyltransferase beta OS=Homo... [more]
GMPPB_BOVIN1.678e-5965.70Mannose-1-phosphate guanyltransferase beta OS=Bos ... [more]
GMPPB_MOUSE3.739e-5964.53Mannose-1-phosphate guanyltransferase beta OS=Mus ... [more]

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Properties
Property NameValue
Genbank descriptionC34002H01EF PostHarvC1 Citrus clementina cDNA clone C34002H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930012 ID=FC930012; Name=FC930012; organism=Citrus clementina; type=EST; length=699bp
GAGACAACAAAAGCAAAGCAAAAGCGAAGCGCGCGAAGCTCGCCTCATCC
GTTGACTGAGCTGTCGGTCCCGAGTCACGACTCGCGACTCTTGTTTTTGA
ACTCAGTTGTTTGCCGTTCGGATCCGGTCTTAATTAAAGGATAAAGCAGG
CTCCGTATCACAATGAAGGCACTTATTCTTGTTGGAGGGTTCGGAACACG
GTTGAGGCCGTTGACGCTTAGTGTCCCTAAGCCACTTGTTGAATTTGCTA
ACAAACCCATGATCCTGCATCAGATAGAGGCCCTTAAGGCAGTTGGAGTG
ACTGAAGTAGTTTTGGCTATTAACTACCAGCCAGAGGTGATGTTGAACTT
TTTGAAGGAATTTGAAGCAAAGCTTGGGATCAAGATCATCTGCTCACAAG
AGACTGAGCCACTGGGCACTGCTGGTCCTCTGGCTCTGGCTAGAGACAAA
TTGATTGACGATACTGGTGAGCCATTTTTCGTCCTTAACAGTGATGTTAT
TAGTGAGTACCCATTTGCAGAAATGATTGAATTCCACAAAGCACATGGAG
GAGAGGCCTCCATCATGGTAACCAAGGTGGATGAGCCATCAAAATATGGT
GTGGTGGTTACGGAAGAGTCTACTGGAAAAGTTGAGAAATTCGTTGAGAA
ACCCTAATTATTTGTTGGTAACAAAATTATGCTGGAATTTATCTTTTGA
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