FC930067

Overview
NameFC930067
Unique NameFC930067
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length744
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930067 vs. ExPASy Swiss-Prot
Match: PRU1_PRUAR (Major allergen Pru ar 1 OS=Prunus armeniaca PE=1 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.940e-40
Identity = 77/159 (48.43%), Postives = 102/159 (64.15%), Query Frame = 1
Query:   85 MGVMRFEKEVSAAVAPSRMFKAFFLEAHNFLPKLVPQAIKSVEILQGDGGAGSIKITNFADGGNFNYAKHRIDELDKDNFRCKYTVIEGDMLGTILESIVYDVKFEASGNGGSICKVASEFHTKGDQXXXXXXXXXXXXXXMGLHKIVEAHLLANPDLY 561
            MGV  +E E ++ + P ++FKAF L+A N +PK+ P A+K  EIL+GDGG G+IK   F +G  + Y KHR+D +DKDN    YT+IEGD L  ++E+I YD+K  AS +GGSI K  S +HTKGD                GL K+VEA+LLANPD Y
Sbjct:    1 MGVFTYETEFTSVIPPEKLFKAFILDADNLIPKVAPTAVKGTEILEGDGGVGTIKKVTFGEGSQYAYVKHRVDGIDKDNLSYSYTLIEGDALSDVIENIAYDIKLVASPDGGSIVKTTSHYHTKGDVEIKEEQVKAGKEKAAGLFKLVEAYLLANPDAY 159          
BLAST of FC930067 vs. ExPASy Swiss-Prot
Match: PRU1_PRUAV (Major allergen Pru av 1 OS=Prunus avium GN=PRUA1 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.220e-36
Identity = 73/159 (45.91%), Postives = 98/159 (61.64%), Query Frame = 1
Query:   85 MGVMRFEKEVSAAVAPSRMFKAFFLEAHNFLPKLVPQAIKSVEILQGDGGAGSIKITNFADGGNFNYAKHRIDELDKDNFRCKYTVIEGDMLGTILESIVYDVKFEASGNGGSICKVASEFHTKGDQXXXXXXXXXXXXXXMGLHKIVEAHLLANPDLY 561
            MGV  +E E ++ + P R+FKAF L+A N +PK+ PQAIK  EIL+GDGG G+IK   F +G  + Y KH+ID +DK+N+   YT+IEGD LG  LE I Y+ K  AS +GGSI K  S +HTKG+                 L K++E +L  +PD Y
Sbjct:    1 MGVFTYESEFTSEIPPPRLFKAFVLDADNLVPKIAPQAIKHSEILEGDGGPGTIKKITFGEGSQYGYVKHKIDSIDKENYSYSYTLIEGDALGDTLEKISYETKLVASPSGGSIIKSTSHYHTKGNVEIKEEHVKAGKEKASNLFKLIETYLKGHPDAY 159          
BLAST of FC930067 vs. ExPASy Swiss-Prot
Match: MAL12_MALDO (Major allergen Mal d 1 OS=Malus domestica PE=1 SV=3)

HSP 1 Score: 146.362 bits (368), Expect = 1.591e-34
Identity = 72/159 (45.28%), Postives = 98/159 (61.64%), Query Frame = 1
Query:   85 MGVMRFEKEVSAAVAPSRMFKAFFLEAHNFLPKLVPQAIKSVEILQGDGGAGSIKITNFADGGNFNYAKHRIDELDKDNFRCKYTVIEGDMLGTILESIVYDVKFEASGNGGSICKVASEFHTKGDQXXXXXXXXXXXXXXMGLHKIVEAHLLANPDLY 561
            MGV  FE E ++ + P R+FKAF L+A N +PK+ PQAIK  EIL+GDGG G+IK   F +G  + Y KH+ID +D+ N+   YT+IEGD L   +E + Y+ K  ASG+ GSI K  S +HTKGD                GL K++E++L  +PD Y
Sbjct:    1 MGVYTFENEYTSEIPPPRLFKAFVLDADNLIPKIAPQAIKHAEILEGDGGPGTIKKITFGEGSQYGYVKHKIDSVDEANYSYAYTLIEGDALTDTIEKVSYETKLVASGS-GSIIKSISHYHTKGDVEIKEEHVKAGKEKAHGLFKLIESYLKGHPDAY 158          
BLAST of FC930067 vs. ExPASy Swiss-Prot
Match: PRS2_SOLTU (Pathogenesis-related protein STH-2 OS=Solanum tuberosum GN=STH-2 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.078e-34
Identity = 77/160 (48.12%), Postives = 103/160 (64.38%), Query Frame = 1
Query:   85 MGVMRFEKEVSAAVAPSRMFKAFFLEAHNFLPKLVPQAIKSVEILQGDGGAGSIKITNFADGGNFNYAKHRIDELDKDNFRCKYTVIEGDMLGTILESIVYDVKFEASGNGGSICKVASEFHTKGDQXXXXXXXXXXXXXXMGLHKIVEAHLLANPDLYA 564
            MGV  +  E +  +AP+R+FKA  +++ N +PKL+PQ +K++E  +GDG   SIK  NF +G    Y KH+I  +D  N   KY++IEGD+LG  LESI YD+KFEA GNGG +CK  +E+HTKGD               M L KIVEA+LLANP +YA
Sbjct:    1 MGVTSYTHETTTPIAPTRLFKALVVDSDNLIPKLMPQ-VKNIEA-EGDG---SIKKMNFVEGSPIKYLKHKIHVVDDKNLVTKYSMIEGDVLGDKLESISYDLKFEAHGNGGCVCKSITEYHTKGDYVLKDEEHNEGQKQGMELFKIVEAYLLANPSVYA 155          
BLAST of FC930067 vs. ExPASy Swiss-Prot
Match: PRS1_SOLTU (Pathogenesis-related protein STH-21 OS=Solanum tuberosum GN=STH-21 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.031e-33
Identity = 77/160 (48.12%), Postives = 102/160 (63.75%), Query Frame = 1
Query:   85 MGVMRFEKEVSAAVAPSRMFKAFFLEAHNFLPKLVPQAIKSVEILQGDGGAGSIKITNFADGGNFNYAKHRIDELDKDNFRCKYTVIEGDMLGTILESIVYDVKFEASGNGGSICKVASEFHTKGDQXXXXXXXXXXXXXXMGLHKIVEAHLLANPDLYA 564
            MGV  +  E +  VAP+R+FKA  +++ N +PKL+PQ +K++E  +GDG   SIK   F +G    Y KH+I  +D  N   KY++IEGD+LG  LESI YD+KFEA GNGG +CK  +E+HTKGD               M L KIVEA+LLANP +YA
Sbjct:    1 MGVTSYTLETTTPVAPTRLFKALVVDSDNLIPKLMPQ-VKNIEA-EGDG---SIKKMTFVEGSPIKYLKHKIHVVDDKNLVTKYSMIEGDVLGDKLESISYDLKFEAHGNGGCVCKSIAEYHTKGDYVLKDEDHNEGKKQGMELFKIVEAYLLANPSVYA 155          
BLAST of FC930067 vs. ExPASy Swiss-Prot
Match: MAL11_MALDO (Major allergen Mal d 1 OS=Malus domestica GN=MALD1 PE=1 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 5.118e-33
Identity = 70/159 (44.03%), Postives = 98/159 (61.64%), Query Frame = 1
Query:   85 MGVMRFEKEVSAAVAPSRMFKAFFLEAHNFLPKLVPQAIKSVEILQGDGGAGSIKITNFADGGNFNYAKHRIDELDKDNFRCKYTVIEGDMLGTILESIVYDVKFEASGNGGSICKVASEFHTKGDQXXXXXXXXXXXXXXMGLHKIVEAHLLANPDLY 561
            MGV  FE E ++ + PSR+FKAF L+A N +PK+ PQAIK  EIL+G+GG G+IK   F +G  + Y KHRID +D+ ++   YT+IEGD L   +E I Y+ K  A G+G +I K  S +HTKG+                GL K++E++L  +PD Y
Sbjct:    1 MGVYTFENEFTSEIPPSRLFKAFVLDADNLIPKIAPQAIKQAEILEGNGGPGTIKKITFGEGSQYGYVKHRIDSIDEASYSYSYTLIEGDALTDTIEKISYETKLVACGSGSTI-KSISHYHTKGNIEIKEEHVKVGKEKAHGLFKLIESYLKDHPDAY 158          
BLAST of FC930067 vs. ExPASy Swiss-Prot
Match: PYRC1_PYRCO (Major allergen Pyr c 1 OS=Pyrus communis GN=PYRC1 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.684e-33
Identity = 69/159 (43.40%), Postives = 98/159 (61.64%), Query Frame = 1
Query:   85 MGVMRFEKEVSAAVAPSRMFKAFFLEAHNFLPKLVPQAIKSVEILQGDGGAGSIKITNFADGGNFNYAKHRIDELDKDNFRCKYTVIEGDMLGTILESIVYDVKFEASGNGGSICKVASEFHTKGDQXXXXXXXXXXXXXXMGLHKIVEAHLLANPDLY 561
            MG+  FE E ++ + P R+FKAF L+A N +PK+ PQAIK  EIL+G+GG G+IK   F +G  + Y KHR+D +D+ ++   YT+IEGD L   +E I Y+ K  ASG+G +I K  S +HTKGD                GL K++E++L  +PD Y
Sbjct:    1 MGLYTFENEFTSEIPPPRLFKAFVLDADNLIPKIAPQAIKHAEILEGNGGPGTIKKITFGEGSQYGYVKHRVDSIDEASYSYAYTLIEGDALTDTIEKISYEAKLVASGSGSTI-KSISHYHTKGDIEIKEEHVKAGKEKAHGLFKLIESYLKDHPDAY 158          
BLAST of FC930067 vs. ExPASy Swiss-Prot
Match: BEV1C_BETVE (Major pollen allergen Bet v 1-C OS=Betula verrucosa GN=BETV1C PE=1 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 8.730e-33
Identity = 68/159 (42.77%), Postives = 99/159 (62.26%), Query Frame = 1
Query:   85 MGVMRFEKEVSAAVAPSRMFKAFFLEAHNFLPKLVPQAIKSVEILQGDGGAGSIKITNFADGGNFNYAKHRIDELDKDNFRCKYTVIEGDMLGTILESIVYDVKFEASGNGGSICKVASEFHTKGDQXXXXXXXXXXXXXXMGLHKIVEAHLLANPDLY 561
            MGV  +E E ++ +  +R+FKAF LE    +PK+ PQAI SVE ++G+GG G+IK   F +G  F Y K R+DE+D  NF+  Y++IEG  LG  LE I  ++K  A+ +GGSI K+++++HTKGDQ                L + VE++LLA+ D Y
Sbjct:    1 MGVFNYESETTSVIPAARLFKAFILEGDTLIPKVAPQAISSVENIEGNGGPGTIKKITFPEGSPFKYVKERVDEVDHANFKYSYSMIEGGALGDTLEKICNEIKIVATPDGGSILKISNKYHTKGDQEMKAEHMKAIKEKGEALLRAVESYLLAHSDAY 159          
BLAST of FC930067 vs. ExPASy Swiss-Prot
Match: MPAG1_ALNGL (Major pollen allergen Aln g 1 OS=Alnus glutinosa PE=1 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 1.140e-32
Identity = 66/159 (41.51%), Postives = 100/159 (62.89%), Query Frame = 1
Query:   85 MGVMRFEKEVSAAVAPSRMFKAFFLEAHNFLPKLVPQAIKSVEILQGDGGAGSIKITNFADGGNFNYAKHRIDELDKDNFRCKYTVIEGDMLGTILESIVYDVKFEASGNGGSICKVASEFHTKGDQXXXXXXXXXXXXXXMGLHKIVEAHLLANPDLY 561
            MGV  +E E  + +  +R+FKAF L+    LPK+ P+A+ SVE ++G+GG G+IK   F +G  F Y K R+DE+D+ NF+  ++VIEG  +G  LE +  ++K  A+ +GGSI K++++FHTKGD               +GL K VE++LLA+ D Y
Sbjct:    1 MGVFNYEAETPSVIPAARLFKAFILDGDKLLPKVAPEAVSSVENIEGNGGPGTIKKITFPEGSPFKYVKERVDEVDRVNFKYSFSVIEGGAVGDALEKVCNEIKIVAAPDGGSILKISNKFHTKGDHEINAEQIKIEKEKAVGLLKAVESYLLAHSDAY 159          
BLAST of FC930067 vs. ExPASy Swiss-Prot
Match: BEV1M_BETVE (Major pollen allergen Bet v 1-M/N OS=Betula verrucosa GN=BETV1M PE=1 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.489e-32
Identity = 67/159 (42.14%), Postives = 99/159 (62.26%), Query Frame = 1
Query:   85 MGVMRFEKEVSAAVAPSRMFKAFFLEAHNFLPKLVPQAIKSVEILQGDGGAGSIKITNFADGGNFNYAKHRIDELDKDNFRCKYTVIEGDMLGTILESIVYDVKFEASGNGGSICKVASEFHTKGDQXXXXXXXXXXXXXXMGLHKIVEAHLLANPDLY 561
            MGV  +E E ++ +  +R+FKAF L+  N +PK+ PQAI SVE ++G+GG G+IK   F +G  F Y K R+DE+D  NF+  Y++IEG  LG  LE I  ++K  A+ +GGSI K+++++HTKGD                 L + VE++LLA+ D Y
Sbjct:    1 MGVFNYESETTSVIPAARLFKAFILDGDNLIPKVAPQAISSVENIEGNGGPGTIKKITFPEGSPFKYVKERVDEVDHANFKYSYSMIEGGALGDTLEKICNEIKIVATPDGGSILKISNKYHTKGDHEMKAEHMKAIKEKGEALLRAVESYLLAHSDAY 159          
The following BLAST results are available for this feature:
BLAST of FC930067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
PRU1_PRUAR1.940e-4048.43Major allergen Pru ar 1 OS=Prunus armeniaca PE=1 S... [more]
PRU1_PRUAV2.220e-3645.91Major allergen Pru av 1 OS=Prunus avium GN=PRUA1 P... [more]
MAL12_MALDO1.591e-3445.28Major allergen Mal d 1 OS=Malus domestica PE=1 SV=... [more]
PRS2_SOLTU2.078e-3448.13Pathogenesis-related protein STH-2 OS=Solanum tube... [more]
PRS1_SOLTU1.031e-3348.13Pathogenesis-related protein STH-21 OS=Solanum tub... [more]
MAL11_MALDO5.118e-3344.03Major allergen Mal d 1 OS=Malus domestica GN=MALD1... [more]
PYRC1_PYRCO6.684e-3343.40Major allergen Pyr c 1 OS=Pyrus communis GN=PYRC1 ... [more]
BEV1C_BETVE8.730e-3342.77Major pollen allergen Bet v 1-C OS=Betula verrucos... [more]
MPAG1_ALNGL1.140e-3241.51Major pollen allergen Aln g 1 OS=Alnus glutinosa P... [more]
BEV1M_BETVE1.489e-3242.14Major pollen allergen Bet v 1-M/N OS=Betula verruc... [more]

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Properties
Property NameValue
Genbank descriptionC34003D10EF PostHarvC1 Citrus clementina cDNA clone C34003D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930067 ID=FC930067; Name=FC930067; organism=Citrus clementina; type=EST; length=744bp
GACGAAAAATCGATCAAAATCATTTTTTTTCTTTTCTAATAGAGCAAGTT
CATTATCACAATTATTTTCAATTGTATTGACAACATGGGTGTCATGCGCT
TTGAGAAAGAGGTCTCAGCTGCTGTTGCGCCATCTAGGATGTTCAAAGCT
TTCTTCCTTGAGGCTCACAATTTTCTGCCAAAATTGGTGCCTCAAGCAAT
CAAGAGCGTTGAGATTCTCCAAGGAGATGGAGGTGCTGGTAGCATTAAAA
TAACCAACTTTGCTGATGGTGGTAATTTCAACTACGCGAAGCATAGAATT
GATGAACTTGACAAAGACAACTTTAGGTGCAAGTACACTGTGATTGAAGG
AGATATGTTGGGGACAATCCTGGAATCAATTGTATACGATGTTAAATTCG
AGGCTTCTGGCAATGGTGGATCCATCTGCAAGGTTGCTTCTGAGTTCCAT
ACAAAAGGTGATCAAGAGATCAAAGAGGAGGCACTCAAGGAAGCTGAAGA
GAAAGCAATGGGATTGCACAAGATTGTGGAGGCGCATCTCTTGGCAAATC
CTGATCTCTATGCTTGAGTTAAATTATTTATCTTTGGTTTCATTTTACTA
TTTAAATATATGCATGGCTACTGGTACTGAATAAGGGTTGTGTCACTATA
TATGATTTGTGAGCTTTATTATATATGTTTTTTATTTCTTTGCGCGCAGT
GGAATGTTTACTGAGCCTTCATGTCGTGCTGTGATTTGTCATAA
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