FC930068

Overview
NameFC930068
Unique NameFC930068
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14162 contig Ccv1_Contig14162:4..743. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930068 vs. ExPASy Swiss-Prot
Match: C82A3_SOYBN (Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.725e-49
Identity = 105/243 (43.21%), Postives = 155/243 (63.79%), Query Frame = 2
Query:   20 TPAIFELLSLLIVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAK---VVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRINRAIKESTHLFGVFVLGDAIPWLESID 739
            T AI  +LSL+ +  F  +  K  N R K+ AP  SGAWP++GHL LLNG +   K+LGALADKYGP+++++LG  P L++S WE+ K+ FTTND  +++R K+VA + M Y+ A   LAPYG YWR++RKI T E LS+ R+E   H+R SEV T IK+L+ + S    N ++   V I + +  LTFN+ ++++ GKR+    + E   +A R  + I+E  +L G F + D +P L  +D
Sbjct:   12 TIAIASILSLIFLCLF--LYRK--NSRGKD-APVVSGAWPILGHLSLLNGSQTPHKVLGALADKYGPLFTIKLGMKPALVLSNWEMSKELFTTNDLAVSSRPKLVAVEVMSYNQAFVGLAPYGPYWRELRKIVTFEFLSNRRIEQRNHIRVSEVRTSIKELFDIWSNGNKNESRYTLVDIKQWLAYLTFNMVVRMVVGKRYFGVMHVEGKDKAQRFMKNIREFMNLMGTFTVADGVPCLRWLD 249          
BLAST of FC930068 vs. ExPASy Swiss-Prot
Match: C82A4_SOYBN (Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.976e-46
Identity = 98/242 (40.50%), Postives = 152/242 (62.81%), Query Frame = 2
Query:   20 TPAIFELLSLLIVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSL--CSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRINRAIKESTHLFGVFVLGDAIPWLESID 739
            T  +  L+ LL ++ +  +  K ++   K  AP   GAWP+ GHLPLL G +   K LGALA+K+GP+++++LG    L+VS WE+ ++CFTTND  ++ R K++  + M Y+NA+  +APYG YWR++RKI  TE+LSS R+E L+ VR SEV   I +LY +    +N  + A V + +   Q  FN+ L+++ GKRF +    ++ +E  +  +A+ E   L GVF +GDAIP+L  +D
Sbjct:   12 TIGVVSLIFLLCLFLYGPL--KKVHGSSKE-APTVGGAWPIFGHLPLLIGSKSPHKALGALAEKHGPLFTIKLGAKKALVVSDWEMARECFTTNDVAVSARPKLLVAELMCYNNAMLLVAPYGPYWRELRKIIVTEILSSSRVEQLQDVRVSEVQNSIVELYDVWRSQKNESDYASVELKQWFAQPIFNMVLRMVVGKRFLSATATDEKAE--KCVKAVDEFMRLAGVFTVGDAIPYLRWLD 248          
BLAST of FC930068 vs. ExPASy Swiss-Prot
Match: C82A1_PEA (Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 7.499e-45
Identity = 102/261 (39.08%), Postives = 145/261 (55.56%), Query Frame = 2
Query:   20 TPAIFELLSLLIVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSE---------------------NAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRINRAIKESTHLFGVFVLGDAIPWLESID 739
            T A   L+SLL  +F +R    S  K      P  SG+WPL+GHLPL+   +   K LGAL DKYGPI++++LG    L++S WE+ K+CFT ND ++++R K VA + M Y+ A    APYG YWR +RKI T E+LS+ R+ELL H+R SEV T IK+L ++ S                      +  +   V + K   QLT N+ L+++ GKR       E   EA R    I++   L G F +GD +P+L+ +D
Sbjct:   10 TIAFISLISLL--FFLFRFSKVSHTKEP----PIISGSWPLLGHLPLMRNTQTPHKTLGALVDKYGPIFTIKLGATNALVLSNWELAKECFTKNDIVVSSRPKPVAVELMSYNQAFIGWAPYGAYWRQLRKIVTLEILSNRRIELLSHIRVSEVQTSIKELVNVWSNQISSQYGLLDDTKSSSTNDEPSTTDYVSVELKKWFAQLTLNMVLRMVVGKRCFGDVDVENKEEAKRFLENIRDFMRLIGTFTVGDGVPFLKWLD 264          
BLAST of FC930068 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.463e-40
Identity = 95/250 (38.00%), Postives = 146/250 (58.40%), Query Frame = 2
Query:    2 MDSTSFTPAIFELLSLLIVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSEN---AFNPAKVVISKLIEQLTFNISLKLIAGKR-FSAKDYEEQGSEAWRINRAIKESTHLFGVFVLGDAIPWLESID 739
            ++ST+    +  L+  L++Y F R       K  +   P  +GAWP+IGHLPLL G +   K LG LADKYGPI+S+++G    ++VS WE+ K+C+TTND  +++   +++   + Y+ ++  +APYG YWR +RKI  +E LS  R+E L HVR SEV + I +L+     N       A V + +    L FN+ L+++ GKR FSA   +++  +A R  +A+ E   L   F +GDAIP+L   D
Sbjct:    5 LNSTTIGVGVVSLI--LLLYLFLR---GGSWKSGEEGPPTVAGAWPIIGHLPLLLGSKTPHKTLGDLADKYGPIFSIKIGAKNAVVVSNWEMAKECYTTNDIAVSSLPDLISANLLCYNRSMIVVAPYGPYWRQLRKILMSEFLSPSRVEQLHHVRVSEVQSSITELFRDWRSNKNVQSGFATVELKQWFSLLVFNMILRMVCGKRYFSASTSDDE--KANRCVKAVDEFVRLAATFTVGDAIPYLRWFD 247          
BLAST of FC930068 vs. ExPASy Swiss-Prot
Match: C81D1_ARATH (Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CYP81D1 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.856e-27
Identity = 72/231 (31.17%), Postives = 126/231 (54.55%), Query Frame = 2
Query:    2 MDSTSFTPAIFELLSLLIVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKY-----GPIYSLRLGKHPILIVSGWEIV-KDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRINRAIKE 676
            M+ T+    ++ + SL+    F  I  K +  +++N  P P G  P+IGHL LL  + PI + L + ++       G + SLRLG   + +VS  ++  ++CF  ND +LA R +++ GK++GY+N     APYG +WR++R++ T E+ S+HRL    +VR  EV   I  L  L          V +  ++  LTFN  ++++ GKR+  ++  ++  EA R+ + + +
Sbjct:    1 MEETNIRVVLYSIFSLI----FLIISFKFLKPKKQNLPPSPPGWLPIIGHLRLL--KPPIHRTLRSFSETLDHNDGGGVMSLRLGSRLVYVVSSHKVAAEECFGKNDVVLANRPQVIIGKHVGYNNTNMIAAPYGDHWRNLRRLCTIEIFSTHRLNCFLYVRTDEVRRLISRLSRLAGT---KKTVVELKPMLMDLTFNNIMRMMTGKRYYGEETTDE-EEAKRVRKLVAD 221          
BLAST of FC930068 vs. ExPASy Swiss-Prot
Match: C75A1_PINTA (Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.424e-27
Identity = 83/239 (34.73%), Postives = 122/239 (51.05%), Query Frame = 2
Query:   23 PAIFELLSLLIVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRINRAIKESTHLFGVFVLGDAIPWLESID 739
            PAI  L++  I +F   I+ +S         P P   WP+IG+   +  + P+ + L  LA+KYGPI  LR G  P ++VS  E  K    T+D I A+R     GKY  Y+    A +PYG +WR +RKI   ELL+S R+E  KHVR  E+   I   +S+  E+      V +SK I     NI  +++A K+FS  D    G++       + E +   G   +GD IP+L+ +D
Sbjct:   17 PAI--LIATFIFFFSCWILHQSQRNERLPPGPYP---WPIIGNFHQV--RLPLHRTLKNLAEKYGPILFLRFGSVPTVVVSSSEKAKHFLKTHDLIFASRPPTSVGKYFFYNFKDIAFSPYGDHWRKMRKICVLELLTSKRIESFKHVRQEELSAMI---HSIWEESESGRIAVNVSKAISTSLANILWRILARKKFSDNDL---GADGKGFADLVVEVSIAVGSLNIGDFIPYLDCLD 242          
BLAST of FC930068 vs. ExPASy Swiss-Prot
Match: C81E1_GLYEC (Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.330e-25
Identity = 72/243 (29.63%), Postives = 129/243 (53.09%), Query Frame = 2
Query:   35 ELLSLL-------IVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQG-SEAWRINRAIKESTHLFGVFVLGDAIPWLESID 739
            E+LSLL        ++F + I+ ++  ++ KN  P P    P+IG+L  L  + P+ +    L++KYG ++SL  G   +++VS     + CFT ND +LA R + ++GKY+ Y+        YG++WR++R+I   ++LS+HR+     +R  E    I     L  +++ N A++ +S  +  +TFN  +++I+GKR+  +D +     EA +    + E   L G     D +P L  +D
Sbjct:    2 EILSLLSYSVFYLALFFIFNIVIRA--RKFKNLPPGPPSL-PIIGNLHHL--KRPLHRTFKGLSEKYGHVFSLWFGSRLVVVVSSASEFQQCFTKNDVVLANRPRFLSGKYIFYNYTTLGSTSYGEHWRNLRRITALDVLSNHRINSFSGIRRDETQRLIT---RLADDSSTNFAEMELSSRLYDMTFNNIMRMISGKRYYGEDCDTSDLQEASQFRDMVSELLQLSGANNKTDFMPLLRFLD 236          
BLAST of FC930068 vs. ExPASy Swiss-Prot
Match: C81F1_ARATH (Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CYP81F1 PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.963e-25
Identity = 68/236 (28.81%), Postives = 127/236 (53.81%), Query Frame = 2
Query:   32 FELLSLLIVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFT-TNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDL--YSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRINRAIKESTHLFGVFVLGDAIPWLE 730
            F LL LL +   ++ +    +K ++   P    + P +GHL L+  + PI ++L   +++YGPI+SLR G   +++++   + ++ FT  ND +L++R   +  KY+ Y++     APYG +WR++R+I + E+LSSHRL   +H+R  E+   +  L  Y+  S  + +   + +  L+  LTFN  ++++ GKR+   D   +  EA    + + +     G     D +P L+
Sbjct:    4 FILLPLLFLVISYKFL---YSKTQRFNLPPGPPSRPFVGHLHLM--KPPIHRLLQRYSNQYGPIFSLRFGSRRVVVITSPSLAQESFTGQNDIVLSSRPLQLTAKYVAYNHTTVGTAPYGDHWRNLRRICSQEILSSHRLINFQHIRKDEILRMLTRLSRYTQTSNESNDFTHIELEPLLSDLTFNNIVRMVTGKRYYGDDVNNK-EEAELFKKLVYDIAMYSGANHSADYLPILK 233          
BLAST of FC930068 vs. ExPASy Swiss-Prot
Match: C71B2_ARATH (Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CYP71B2 PE=2 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 4.278e-24
Identity = 73/233 (31.33%), Postives = 114/233 (48.93%), Query Frame = 2
Query:   41 LSLLIVYFFWRI--IAKSI----NKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRINRAIKESTHLFGVFVLGDAIP 721
            +++L+ +F   +  I  SI    NK  K   P    + P+IG+L  L G    C     L+ KYGP+  LRLG  P++++S  E  +    TND    +R K V    + Y       APYG+YWR++RK+A  EL SS +++  +++R  EVD  +K +    SE+A   + V +SK    LT +I  ++  G+ F+   +     +  RI   + ES    G F   D  P
Sbjct:    1 MTILLCFFLVSLLTIVSSIFLKQNKTSKFNLPPSPSSLPIIGNLHHLAGLPHRC--FHKLSIKYGPLVFLRLGSVPVVVISSSEAAEAVLKTNDLECCSRPKTVGSGKLSYGFKDITFAPYGEYWREVRKLAVIELFSSKKVQSFRYIREEEVDFVVKKV----SESALKQSPVDLSKTFFSLTASIICRVALGQNFNESGFV---IDQDRIEELVTESAEALGTFTFSDFFP 224          
BLAST of FC930068 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.621e-23
Identity = 73/238 (30.67%), Postives = 123/238 (51.68%), Query Frame = 2
Query:   29 IFELLSLLIVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAK-DYEEQGSEAWRINRAIKESTHLFGVFVLGDAIPWLESID 739
            +F LL  +I      I  K    +++NT P P G  PLIG+L  L G+ P  + L +L+ +YGP+  L  G+ P+L+VS  E+ +D   T+DR+ A+R +    + + YD    A APYG+YWR ++ +    L S+  +   + VR  E+   ++ +    S        V +SK++  LT ++  K+  G+++  + D++E      R+N+       L G F +G  +PWL  ID
Sbjct:    4 MFFLLCSIIFVVTIIIFRKQKRGKKRNTLPSPPGL-PLIGNLHQL-GRHPH-RSLCSLSHRYGPLMLLHFGRVPVLVVSSAELARDVLKTHDRVFASRPRSKIFEKLLYDKHDVASAPYGEYWRQMKSVCVLHLFSNKMVRSFREVREEEISLMMEKIRKSIS------LPVNLSKILVSLTNDVICKVALGRKYGGETDFKELME---RLNK-------LLGTFSVGSYVPWLAWID 222          
The following BLAST results are available for this feature:
BLAST of FC930068 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
C82A3_SOYBN1.725e-4943.21Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=... [more]
C82A4_SOYBN3.976e-4640.50Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=... [more]
C82A1_PEA7.499e-4539.08Cytochrome P450 82A1 (Fragment) OS=Pisum sativum G... [more]
C82A2_SOYBN1.463e-4038.00Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=... [more]
C81D1_ARATH1.856e-2731.17Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CY... [more]
C75A1_PINTA2.424e-2734.73Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 P... [more]
C81E1_GLYEC1.330e-2529.63Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata ... [more]
C81F1_ARATH2.963e-2528.81Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CY... [more]
C71B2_ARATH4.278e-2431.33Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CY... [more]
C71AQ_ARATH3.621e-2330.67Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34003D11EF PostHarvC1 Citrus clementina cDNA clone C34003D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930068 ID=FC930068; Name=FC930068; organism=Citrus clementina; type=EST; length=740bp
GATGGATTCTACTTCTTTCACCCCAGCAATTTTTGAGCTCTTATCTCTGC
TAATTGTCTATTTTTTTTGGAGAATCATAGCAAAATCTATAAACAAAAGA
GAGAAAAATACTGCCCCCGAGCCATCTGGGGCATGGCCACTCATCGGCCA
TTTGCCTCTGCTAAATGGCCAAGAACCAATTTGCAAAATACTTGGAGCAT
TGGCCGATAAATATGGGCCCATCTATTCTCTTAGACTTGGCAAGCATCCC
ATATTGATTGTGAGCGGTTGGGAAATTGTGAAGGATTGCTTCACTACCAA
TGACAGAATTCTGGCTACAAGGGCAAAAATTGTAGCAGGCAAGTATATGG
GTTATGACAACGCCATTTTTGCACTTGCTCCCTACGGTCAGTACTGGCGT
GATATTCGCAAAATAGCCACCACAGAGCTTCTCTCAAGTCACCGGCTTGA
ATTGCTGAAGCACGTTCGCTACTCTGAAGTTGACACTTTCATCAAAGATT
TGTACTCACTTTGCTCAGAAAACGCATTCAATCCTGCGAAGGTGGTGATC
AGCAAGTTAATCGAGCAGTTAACTTTCAATATAAGCCTGAAACTGATAGC
TGGGAAGCGATTTTCAGCTAAAGATTATGAGGAACAAGGCAGCGAGGCTT
GGCGTATCAATAGAGCAATAAAAGAAAGCACGCACCTATTCGGGGTTTTC
GTCTTGGGAGATGCCATACCATGGCTTGAATCGATTGACT
back to top