FC930071

Overview
NameFC930071
Unique NameFC930071
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length738
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC930071_ssr103 microsatellite FC930071_ssr103:103..114. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig15098 contig Ccv1_Contig15098:1..738. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930071 vs. ExPASy Swiss-Prot
Match: FL3H_MATIN (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1)

HSP 1 Score: 319.316 bits (817), Expect = 1.351e-86
Identity = 155/201 (77.11%), Postives = 177/201 (88.06%), Query Frame = 1
Query:  142 APSTLTALAAEKTLNPSFVRFQDERPKVAYNEFSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVVKDWREIVTYFSYPKQSRDYSRWPDKPEGWMEVTKEYSDQLMGVACKLLEVLSEAMGLEKEL*LSMC-GLDQK-MCHYY 738
            AP TLT LA E  LN  FVR +DERPKVAYNEFS+EIPVISLAGIDDV GKR EIC++IVEACE+WGIFQVVDHGVD  L++DMTRLA +FFALPPEEKL+FDMSGGKKGGFIVSSHLQGE V+DWREIVTYFSYP ++RDYSRWPDKP+GW +VT+EYS++LMG+ACKLLEVLSEAMGLEKE   + C  +DQK + +YY
Sbjct:    1 APGTLTELAGESKLNSKFVRDEDERPKVAYNEFSDEIPVISLAGIDDVDGKRGEICREIVEACENWGIFQVVDHGVDTSLVADMTRLARDFFALPPEEKLRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPVRNRDYSRWPDKPQGWAKVTEEYSEKLMGLACKLLEVLSEAMGLEKESLTNACVDMDQKIVVNYY 201          
BLAST of FC930071 vs. ExPASy Swiss-Prot
Match: FL3H_ARATH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 6.704e-86
Identity = 154/202 (76.24%), Postives = 177/202 (87.62%), Query Frame = 1
Query:  139 MAPSTLTALAAEKTLNPSFVRFQDERPKVAYNEFSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVVKDWREIVTYFSYPKQSRDYSRWPDKPEGWMEVTKEYSDQLMGVACKLLEVLSEAMGLEKEL*LSMC-GLDQK-MCHYY 738
            MAP TLT LA E  LN  FVR +DERPKVAYN FS+EIPVISLAGIDDV GKR EIC++IVEACE+WGIFQVVDHGVD  L++DMTRLA +FFALPPE+KL+FDMSGGKKGGFIVSSHLQGE V+DWREIVTYFSYP ++RDYSRWPDKPEGW++VT+EYS++LM +ACKLLEVLSEAMGLEKE   + C  +DQK + +YY
Sbjct:    1 MAPGTLTELAGESKLNSKFVRDEDERPKVAYNVFSDEIPVISLAGIDDVDGKRGEICRQIVEACENWGIFQVVDHGVDTNLVADMTRLARDFFALPPEDKLRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPVRNRDYSRWPDKPEGWVKVTEEYSERLMSLACKLLEVLSEAMGLEKESLTNACVDMDQKIVVNYY 202          
BLAST of FC930071 vs. ExPASy Swiss-Prot
Match: FL3H_PETHY (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 1.494e-85
Identity = 152/197 (77.16%), Postives = 174/197 (88.32%), Query Frame = 1
Query:  139 MAPSTLTALAAEKTLNPSFVRFQDERPKVAYNEFSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVVKDWREIVTYFSYPKQSRDYSRWPDKPEGWMEVTKEYSDQLMGVACKLLEVLSEAMGLEKEL*LSMC-GLDQKM 726
            + PSTLTALA EKTL  SF+R +DERPKVAYN+FSNEIP+ISL GIDD  GKRAEIC KIV+ACEDWG+FQVVDHGVDA++IS MT  A EFFALPPEEKL+FDMSGGKKGGFIVSSHLQGEVV+DWREIVTYFSYP ++RDYSRWPDKPEGW+ VT++YS++LM +ACKLL+VLSEAMGLEKE     C  +DQK+
Sbjct:    4 VTPSTLTALAEEKTLQTSFIRDEDERPKVAYNQFSNEIPIISLEGIDDETGKRAEICDKIVKACEDWGVFQVVDHGVDAEVISQMTTFAKEFFALPPEEKLRFDMSGGKKGGFIVSSHLQGEVVQDWREIVTYFSYPTRARDYSRWPDKPEGWIAVTQKYSEKLMELACKLLDVLSEAMGLEKEALTKACVDMDQKV 200          
BLAST of FC930071 vs. ExPASy Swiss-Prot
Match: FL3H_PETCR (Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 2.817e-84
Identity = 155/203 (76.35%), Postives = 176/203 (86.70%), Query Frame = 1
Query:  139 MAPSTLTALAAEKTLNPSFVRFQDERPKVAYNEFSNEIPVISLAGIDDVG-GKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVVKDWREIVTYFSYPKQSRDYSRWPDKPEGWMEVTKEYSDQLMGVACKLLEVLSEAMGLEKEL*LSMC-GLDQK-MCHYY 738
            MAPSTLTALA EKTLN  FVR +DERPK+AYN+FS+EIPVISLAGIDD    KR++IC+KIVEACEDWGIFQVVDHG+D  LIS+MTRLA +FFALP EEKL+FDM+GGKKGGFIVSSHLQGE V+DWREIVTYFSYP Q+RDYSRWPDKPEGW  +T+ YSD+LM +ACKLLEVLSEAMGLEKE     C  +DQK + +YY
Sbjct:    1 MAPSTLTALAQEKTLNSKFVRDEDERPKIAYNKFSDEIPVISLAGIDDDSVDKRSQICRKIVEACEDWGIFQVVDHGIDIDLISEMTRLARQFFALPAEEKLRFDMTGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPIQARDYSRWPDKPEGWRSITEMYSDELMALACKLLEVLSEAMGLEKEGLTKACVDMDQKVIVNYY 203          
BLAST of FC930071 vs. ExPASy Swiss-Prot
Match: FL3H_MALDO (Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 1.826e-83
Identity = 152/198 (76.77%), Postives = 172/198 (86.87%), Query Frame = 1
Query:  139 MAPST-LTALAAEKTLNPSFVRFQDERPKVAYNEFSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVVKDWREIVTYFSYPKQSRDYSRWPDKPEGWMEVTKEYSDQLMGVACKLLEVLSEAMGLEKEL*LSMC-GLDQKM 726
            MAP+T LT++A EKTL   FVR +DERPKVAYN+FSNEIP+ISLAGID+V G+R EICKKIV ACEDWGIFQ+VDHGVDA+LIS+MT LA EFFALP EEKL+FDMSGGKKGGFIVSSHLQGE V+DWREIVTYFSYP + RDYSRWPDKPE W EVTK+YSD+LMG+ACKLL VLSEAMGL+ E     C  +DQK+
Sbjct:    1 MAPATTLTSIAHEKTLQQKFVRDEDERPKVAYNDFSNEIPIISLAGIDEVEGRRGEICKKIVAACEDWGIFQIVDHGVDAELISEMTGLAREFFALPSEEKLRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPIRHRDYSRWPDKPEAWREVTKKYSDELMGLACKLLGVLSEAMGLDTEALTKACVDMDQKV 198          
BLAST of FC930071 vs. ExPASy Swiss-Prot
Match: FL3H_DIACA (Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 5.497e-80
Identity = 150/200 (75.00%), Postives = 169/200 (84.50%), Query Frame = 1
Query:  145 PSTLTALAAEKTLNPSFVRFQDERPKVAYNEFSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVVKDWREIVTYFSYPKQSRDYSRWPDKPEGWMEVTKEYSDQLMGVACKLLEVLSEAMGLEKEL*LSMC-GLDQK-MCHYY 738
            P TLT+L  +  LN +FVR +DERPKVAYNEFSN+IPVISLAGID  G KR EIC+KIVEACEDWGIFQVVDHGV   LI+DMTRLA EFFALP EEKL+FDMSGGKKGGFIVSSHLQGEVV+DWREIVTYFSYP  SRDY+RWPDKPEGW++VT+EYS++LM +AC LL VLSEAMGLE E     C  +DQK + +YY
Sbjct:    6 PKTLTSLEGDDKLNSNFVRDEDERPKVAYNEFSNDIPVISLAGID--GEKRGEICRKIVEACEDWGIFQVVDHGVGDDLIADMTRLAREFFALPAEEKLRFDMSGGKKGGFIVSSHLQGEVVQDWREIVTYFSYPTNSRDYTRWPDKPEGWIKVTEEYSNKLMTLACTLLGVLSEAMGLELEALTKACVDMDQKIVVNYY 203          
BLAST of FC930071 vs. ExPASy Swiss-Prot
Match: FL3H_VITVI (Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 9.377e-80
Identity = 147/198 (74.24%), Postives = 169/198 (85.35%), Query Frame = 1
Query:  139 MAPSTLTALAAEKTLNPSFVRFQDERPKVAYNEFSNEIPVISLAGID-DVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVVKDWREIVTYFSYPKQSRDYSRWPDKPEGWMEVTKEYSDQLMGVACKLLEVLSEAMGLEKEL*LSMC-GLDQKM 726
            MAP+TLTALA EKTL  SFVR +DERPKVAYN+FSNEIPVISL      +     EIC+KIVEACEDWGIFQVV+HGVD+ LIS+MTRLA EFFALPPEE ++FDMSGGKKGGFIVSSHLQGE V+DWREIVTYFSYP ++RDYSRWPDKPEGW  VT+EYS++LMG+ACKLLEVLSEAM L+K+   + C  +DQK+
Sbjct:    1 MAPTTLTALAGEKTLQSSFVRDEDERPKVAYNDFSNEIPVISLTKESMKLAAVVDEICRKIVEACEDWGIFQVVNHGVDSNLISEMTRLAREFFALPPEENVRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPLRTRDYSRWPDKPEGWRSVTQEYSEKLMGLACKLLEVLSEAMDLDKDALTNACVDMDQKV 198          
BLAST of FC930071 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 2.237e-73
Identity = 136/203 (67.00%), Postives = 167/203 (82.27%), Query Frame = 1
Query:  139 MAPSTLTALAAEKTLNPSFVRFQDERPKVAYNEFSNEIPVISLAGIDDVG-GKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVVKDWREIVTYFSYPKQSRDYSRWPDKPEGWMEVTKEYSDQLMGVACKLLEVLSEAMGLEK-EL*LSMCGLDQK-MCHYY 738
            MAP+T+TALA EKTLN  FVR +DERPKVAYN+FSNEIP+ISLAG+DD   G+R EIC+KIV+ACEDWGIFQVVDHG+D+ LIS+MTRL+ EFFALP EEKL++D +GGK+GGF +S+ LQG+   DWRE VTYFSYP  +RDYSRWP KPEGW   T+ YS++LM +  KLLEVLSEAMGLEK +L  +   ++QK + +YY
Sbjct:    1 MAPTTITALAKEKTLNLDFVRDEDERPKVAYNQFSNEIPIISLAGLDDDSDGRRPEICRKIVKACEDWGIFQVVDHGIDSGLISEMTRLSREFFALPAEEKLEYDTTGGKRGGFTISTVLQGDDAMDWREFVTYFSYPINARDYSRWPKKPEGWRSTTEVYSEKLMVLGAKLLEVLSEAMGLEKGDLTKACVDMEQKVLINYY 203          
BLAST of FC930071 vs. ExPASy Swiss-Prot
Match: FL3H_CALCH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis GN=FHT PE=2 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 3.816e-73
Identity = 138/184 (75.00%), Postives = 155/184 (84.24%), Query Frame = 1
Query:  193 FVRFQDERPKVAYNEFSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVVKDWREIVTYFSYPKQSRDYSRWPDKPEGWMEVTKEYSDQLMGVACKLLEVLSEAMGLEKEL*LSMC-GLDQK-MCHYY 738
            FVR +DERPKV YN FSNEIPVISLAGID  G +RAEIC +IV+ACEDWGIFQVVDHGVD KL+SDMT LA +FF LP +EKL+FDM+GGKKGGFIVSSHLQGE V+DWREIVTYFSYP ++RDYSRWPDKP  W  VT+EYS  LMG+ACKLLEVLSEAMGLEKE     C  +DQK + +YY
Sbjct:   19 FVRDEDERPKVPYNTFSNEIPVISLAGID--GCRRAEICDEIVKACEDWGIFQVVDHGVDTKLLSDMTGLARDFFHLPTQEKLRFDMTGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPIKARDYSRWPDKPNEWRAVTEEYSKVLMGLACKLLEVLSEAMGLEKEALTKACVDMDQKVVVNYY 200          
BLAST of FC930071 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 5.702e-69
Identity = 125/186 (67.20%), Postives = 152/186 (81.72%), Query Frame = 1
Query:  172 EKTLNPSFVRFQDERPKVAYNEFSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVVKDWREIVTYFSYPKQSRDYSRWPDKPEGWMEVTKEYSDQLMGVACKLLEVLSEAMGLEKEL*LSMC-GLDQKM 726
            E TL PSFVR +DERPKVA++ FS+ +P+ISL GID  G +RA+I  ++  ACEDWGIFQV+DHGVDA LI+DMTRLA EFFALP E+KL++DMSGGKKGGFIVSSHLQGE V+DWREIVTYFSYP ++RDY RWP+KP GW  V + YS++LMG++C L+ VLSEAMGLE E     C  +DQK+
Sbjct:   17 EATLRPSFVRDEDERPKVAHDRFSDAVPLISLHGID--GARRAQIRDRVAAACEDWGIFQVIDHGVDADLIADMTRLAREFFALPAEDKLRYDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPVKARDYGRWPEKPAGWCAVVERYSERLMGLSCNLMGVLSEAMGLETEALAKACVDMDQKV 200          
The following BLAST results are available for this feature:
BLAST of FC930071 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
FL3H_MATIN1.351e-8677.11Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
FL3H_ARATH6.704e-8676.24Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabido... [more]
FL3H_PETHY1.494e-8577.16Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
FL3H_PETCR2.817e-8476.35Flavanone 3-dioxygenase OS=Petroselinum crispum GN... [more]
FL3H_MALDO1.826e-8376.77Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus d... [more]
FL3H_DIACA5.497e-8075.00Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthu... [more]
FL3H_VITVI9.377e-8074.24Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis v... [more]
FNSI_PETCR2.237e-7367.00Flavone synthase OS=Petroselinum crispum GN=FNSI P... [more]
FL3H_CALCH3.816e-7375.00Naringenin,2-oxoglutarate 3-dioxygenase OS=Callist... [more]
FL3H_HORVU5.702e-6967.20Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]

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Properties
Property NameValue
Genbank descriptionC34003E02EF PostHarvC1 Citrus clementina cDNA clone C34003E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930071 ID=FC930071; Name=FC930071; organism=Citrus clementina; type=EST; length=738bp
GAAACATGCACATTAACCGCCCACAACACAAGCGGCAGTTGCGCATCACC
CTTGGACTCACTCTTTTGCTTTTAAACAGATACATATACATTTGCTCTAA
TATATTATTATTATTTGTGCTTCGTTGATCATCAATTAATGGCTCCTTCA
ACCCTCACCGCCCTTGCTGCGGAGAAAACCCTCAACCCAAGCTTTGTCCG
CTTTCAAGATGAGCGTCCCAAGGTGGCTTATAATGAATTCAGCAATGAAA
TTCCTGTGATTTCACTTGCTGGGATCGATGACGTCGGTGGCAAAAGGGCT
GAGATTTGCAAGAAAATTGTTGAGGCGTGTGAGGACTGGGGAATCTTTCA
AGTTGTTGATCATGGTGTTGATGCTAAGCTTATATCCGATATGACTCGTC
TTGCTACAGAATTTTTCGCCCTGCCCCCTGAGGAGAAGCTCAAGTTTGAT
ATGTCCGGTGGGAAGAAGGGTGGCTTCATTGTCTCCAGCCACCTTCAGGG
TGAAGTAGTAAAAGATTGGCGTGAAATAGTGACGTATTTTTCATACCCAA
AGCAAAGCCGAGACTACTCTCGTTGGCCGGACAAGCCAGAAGGGTGGATG
GAAGTAACAAAAGAATACAGTGACCAATTAATGGGAGTGGCGTGCAAGCT
TCTAGAAGTTTTATCAGAGGCAATGGGATTGGAGAAGGAGCTTTGACTAA
GCATGTGTGGACTGGACCAAAAGATGTGTCATTACTAT
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