FC930072
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: IVD_ARATH (Isovaleryl-CoA dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=IVD PE=1 SV=2) HSP 1 Score: 239.965 bits (611), Expect = 6.874e-100 Identity = 115/143 (80.42%), Postives = 124/143 (86.71%), Query Frame = 3 Query: 27 QDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTTLKLAQK 455 +DVNLWKLMG FNLHGITAP+E HCIAMEEISRASGSV LSYGAHSNLCINQLVR+G+ AQK+KYLPKLISGEHVGALAMSEPNAGSDVVGMKCKA++VDGGYI+NGNKMWCTNGP A+TLVVYAKT K K Sbjct: 65 KDVNLWKLMGEFNLHGITAPEEYGGLGLGYLYHCIAMEEISRASGSVALSYGAHSNLCINQLVRNGTAAQKEKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKAEKVDGGYILNGNKMWCTNGPSAETLVVYAKTDTKAGSK 207 HSP 2 Score: 145.976 bits (367), Expect = 6.874e-100 Identity = 71/80 (88.75%), Postives = 75/80 (93.75%), Query Frame = 2 Query: 428 KNNIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGP 667 K + KAGSKGITAFIIEKGM GFSTAQKLDKLGMRGSDTCELVFENCFVP EN+L +EGKGVYV+MSGLDLERLVLAAGP Sbjct: 199 KTDTKAGSKGITAFIIEKGMTGFSTAQKLDKLGMRGSDTCELVFENCFVPEENILDKEGKGVYVLMSGLDLERLVLAAGP 278
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: IVD2_SOLTU (Isovaleryl-CoA dehydrogenase 2, mitochondrial (Fragment) OS=Solanum tuberosum GN=IVD2 PE=1 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 1.177e-96 Identity = 111/143 (77.62%), Postives = 122/143 (85.31%), Query Frame = 3 Query: 27 QDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTTLKLAQK 455 QDVNLWKLMG+FNL GIT P+E HCIAMEEISRASGSVGLSYGAH+NLCINQLVR+G+ QK KYLPKLISGEHVGALAMSEP+AGSDVV MKCKADRV+GGY++NGNKMWCTNGP AQTLVVYAKT + + K Sbjct: 57 QDVNLWKLMGDFNLLGITVPEEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHTNLCINQLVRNGTHEQKQKYLPKLISGEHVGALAMSEPDAGSDVVSMKCKADRVEGGYVLNGNKMWCTNGPTAQTLVVYAKTDVTASSK 199 HSP 2 Score: 143.665 bits (361), Expect = 1.177e-96 Identity = 70/80 (87.50%), Postives = 74/80 (92.50%), Query Frame = 2 Query: 428 KNNIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGP 667 K ++ A SKGITAFIIEKGM GFSTAQKLDKLGMRGSDTCELVFENCFVP ENVLGQ GKGVYV+MSGLDLERLVLA+GP Sbjct: 191 KTDVTASSKGITAFIIEKGMTGFSTAQKLDKLGMRGSDTCELVFENCFVPEENVLGQVGKGVYVLMSGLDLERLVLASGP 270
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: IVD_PONAB (Isovaleryl-CoA dehydrogenase, mitochondrial OS=Pongo abelii GN=IVD PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.862e-76 Identity = 89/133 (66.92%), Postives = 103/133 (77.44%), Query Frame = 3 Query: 42 WKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTTL 440 WK +GN + GITAP + H + MEEISRASG+VGLSYGAHSNLCINQLVR+G+ AQK+KYLPKLISGE++GALAMSEPNAGSDVV MK KA++ YI+NGNK W TNGP A L+VYAKT L Sbjct: 81 WKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRASGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEYIGALAMSEPNAGSDVVSMKLKAEKKGNHYILNGNKFWITNGPDADVLIVYAKTDL 213 HSP 2 Score: 124.79 bits (312), Expect = 1.862e-76 Identity = 58/73 (79.45%), Postives = 67/73 (91.78%), Query Frame = 2 Query: 449 SKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGP 667 S+GITAFI+EKGMPGFST++KLDKLGMRGS+TCEL+FE+C VP N+LG E KGVYV+MSGLDLERLVLA GP Sbjct: 219 SRGITAFIVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKVPAANILGHENKGVYVLMSGLDLERLVLAGGP 291
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: IVD_HUMAN (Isovaleryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=IVD PE=1 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 2.428e-76 Identity = 89/133 (66.92%), Postives = 103/133 (77.44%), Query Frame = 3 Query: 42 WKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTTL 440 WK +GN + GITAP + H + MEEISRASG+VGLSYGAHSNLCINQLVR+G+ AQK+KYLPKLISGE++GALAMSEPNAGSDVV MK KA++ YI+NGNK W TNGP A L+VYAKT L Sbjct: 81 WKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRASGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEYIGALAMSEPNAGSDVVSMKLKAEKKGNHYILNGNKFWITNGPDADVLIVYAKTDL 213 HSP 2 Score: 124.405 bits (311), Expect = 2.428e-76 Identity = 57/73 (78.08%), Postives = 67/73 (91.78%), Query Frame = 2 Query: 449 SKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGP 667 S+GITAFI+EKGMPGFST++KLDKLGMRGS+TCEL+FE+C +P N+LG E KGVYV+MSGLDLERLVLA GP Sbjct: 219 SRGITAFIVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKIPAANILGHENKGVYVLMSGLDLERLVLAGGP 291
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: IVD_MOUSE (Isovaleryl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Ivd PE=1 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 4.511e-75 Identity = 86/133 (64.66%), Postives = 102/133 (76.69%), Query Frame = 3 Query: 42 WKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTTL 440 WK +G+ + GITAP + H + MEEISRASG+VGLSYGAHSNLC+NQ+VR+G+ AQK+KYLPKLISGE +GALAMSEPNAGSDVV MK KA++ Y++NGNK W TNGP A LVVYAKT L Sbjct: 82 WKQLGSLGVLGITAPVQYGGSGLGYLEHVLVMEEISRASGAVGLSYGAHSNLCVNQIVRNGNEAQKEKYLPKLISGEFIGALAMSEPNAGSDVVSMKLKAEKKGDHYVLNGNKFWITNGPDADILVVYAKTDL 214 HSP 2 Score: 125.176 bits (313), Expect = 4.511e-75 Identity = 60/73 (82.19%), Postives = 67/73 (91.78%), Query Frame = 2 Query: 449 SKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGP 667 S+GITAFI+EKGMPGFST++KLDKLGMRGS+TCELVFE+C VP NVL QE KGVYV+MSGLDLERLVLA GP Sbjct: 220 SRGITAFIVEKGMPGFSTSKKLDKLGMRGSNTCELVFEDCKVPAANVLSQESKGVYVLMSGLDLERLVLAGGP 292
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: IVD_BOVIN (Isovaleryl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=IVD PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 6.423e-74 Identity = 84/131 (64.12%), Postives = 100/131 (76.34%), Query Frame = 3 Query: 42 WKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKT 434 WK +GN + GITAP + + + MEEISR SG+VGLSYGAHSNLCINQ+VR+G+ QK+KYLPKLISGE++GALAMSEPNAGSDVV MK KA++ Y++NGNK W TNGP A LVVYAKT Sbjct: 84 WKQLGNLGVLGITAPVQYGGSGLGFLENVLVMEEISRVSGAVGLSYGAHSNLCINQIVRNGNETQKEKYLPKLISGEYIGALAMSEPNAGSDVVSMKLKAEKKGDHYVLNGNKFWITNGPDADVLVVYAKT 214 HSP 2 Score: 124.405 bits (311), Expect = 6.423e-74 Identity = 59/73 (80.82%), Postives = 67/73 (91.78%), Query Frame = 2 Query: 449 SKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGP 667 S+GITAFI+EKGMPGFST++KLDKLGMRGS+TCELVFE+C VP N+LG GKGVYV+MSGLDLERLVLA GP Sbjct: 222 SRGITAFIVEKGMPGFSTSKKLDKLGMRGSNTCELVFEDCEVPAANILGHLGKGVYVLMSGLDLERLVLAGGP 294
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: IVD_RAT (Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Ivd PE=1 SV=2) HSP 1 Score: 175.252 bits (443), Expect = 2.424e-73 Identity = 85/133 (63.91%), Postives = 101/133 (75.94%), Query Frame = 3 Query: 42 WKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTTL 440 WK +G+ + GITAP + H + MEEISRAS +VGLSYGAHSNLCINQ+VR+G+ AQK+KYLPKLISGE +GALAMSEPNAGSDVV M+ KA++ Y++NGNK W TNGP A LVVYAKT L Sbjct: 82 WKQLGSLGVLGITAPVQYGGSGLGYLEHVLVMEEISRASAAVGLSYGAHSNLCINQIVRNGNEAQKEKYLPKLISGEFIGALAMSEPNAGSDVVSMRLKAEKKGDHYVLNGNKFWITNGPDADVLVVYAKTDL 214 HSP 2 Score: 122.094 bits (305), Expect = 2.424e-73 Identity = 58/73 (79.45%), Postives = 66/73 (90.41%), Query Frame = 2 Query: 449 SKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGP 667 S+GITAFI+EK MPGFST++KLDKLGMRGS+TCELVFE+C VP N+L QE KGVYV+MSGLDLERLVLA GP Sbjct: 220 SRGITAFIVEKDMPGFSTSKKLDKLGMRGSNTCELVFEDCKVPAANILSQESKGVYVLMSGLDLERLVLAGGP 292
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: IVD1_SOLTU (Isovaleryl-CoA dehydrogenase 1, mitochondrial OS=Solanum tuberosum GN=IVD1 PE=2 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 9.882e-59 Identity = 106/155 (68.39%), Postives = 123/155 (79.35%), Query Frame = 3 Query: 27 QDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTTLKLAQKESQHLS*RKECP 491 +++NLWKLMG+FNLHGITAP+E HCIA+EEISRASG+V +SYG SN+CINQLVR+G+P QK KYLPKLISG+H+GALAMSEPNAGSDVV MKC+ADRVDGGY++NGNKMWCTNGPVA TL+VYAKT K KE P Sbjct: 68 KEINLWKLMGDFNLHGITAPEEYGGLNLGYLYHCIALEEISRASGAVAVSYGVQSNVCINQLVRNGTPDQKQKYLPKLISGDHIGALAMSEPNAGSDVVSMKCRADRVDGGYVLNGNKMWCTNGPVANTLIVYAKTDTTAGSKGITAFIIEKEMP 222 HSP 2 Score: 148.288 bits (373), Expect = 3.420e-35 Identity = 73/80 (91.25%), Postives = 75/80 (93.75%), Query Frame = 2 Query: 428 KNNIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGP 667 K + AGSKGITAFIIEK MPGFSTAQKLDKLGMRGSDTCELVFENCFVP ENVLGQEGKGVYV+MSGLDLERLVLAAGP Sbjct: 202 KTDTTAGSKGITAFIIEKEMPGFSTAQKLDKLGMRGSDTCELVFENCFVPKENVLGQEGKGVYVLMSGLDLERLVLAAGP 281
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: ACDS_CLOAB (Acyl-CoA dehydrogenase, short-chain specific OS=Clostridium acetobutylicum GN=bcd PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.657e-37 Identity = 50/130 (38.46%), Postives = 75/130 (57.69%), Query Frame = 3 Query: 45 KLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKT 434 K MG + + GI +E + IA+EE+S+ G+ G+ AH++LC + + HG+ QK KYL L GE +GA ++EPNAG+D + A Y+ING+K++ TNG VA T V++A T Sbjct: 43 KKMGQYGMMGIPFSKEYGGAGGDVLSYIIAVEELSKVCGTTGVILSAHTSLCASLINEHGTEEQKQKYLVPLAKGEKIGAYGLTEPNAGTDSGAQQTVAVLEGDHYVINGSKIFITNGGVADTFVIFAMT 172 HSP 2 Score: 77.7962 bits (190), Expect = 2.657e-37 Identity = 40/72 (55.56%), Postives = 51/72 (70.83%), Query Frame = 2 Query: 446 GSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAA 661 G+KGI+AFIIEKG GFS + KLG+R S T ELVFE+ VP EN++G+EGKG + M LD R+ +AA Sbjct: 177 GTKGISAFIIEKGFKGFSIGKVEQKLGIRASSTTELVFEDMIVPVENMIGKEGKGFPIAMKTLDGGRIGIAA 248
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: ACDB_BACSU (Acyl-CoA dehydrogenase OS=Bacillus subtilis GN=mmgC PE=2 SV=3) HSP 1 Score: 98.9821 bits (245), Expect = 7.653e-37 Identity = 48/132 (36.36%), Postives = 79/132 (59.85%), Query Frame = 3 Query: 39 LWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKT 434 L K MG L GI P++ + +A+ EISR S +VG+ H+++ N ++ G+ QK KY+P L SG+H+GA A++EP++GSD ++ A + +G Y++NG+K++ TNG A + +A T Sbjct: 39 LIKKMGKHGLMGIPVPEQYGGAGADVVSYILAIHEISRISAAVGVILSVHTSVGTNPILYFGNEEQKMKYIPNLASGDHLGAFALTEPHSGSDAGSLRTTAIKKNGKYLLNGSKIFITNGGAADIYITFALT 170 HSP 2 Score: 76.2554 bits (186), Expect = 7.653e-37 Identity = 35/72 (48.61%), Postives = 52/72 (72.22%), Query Frame = 2 Query: 446 GSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAA 661 G GI+AFI+EK PGF+ +K KLG+ GS+T EL+F+N VP N+LG+EG G ++ M+ L++ R+ +AA Sbjct: 175 GRHGISAFIVEKNTPGFTVGKKERKLGLYGSNTTELIFDNAEVPEANLLGKEGDGFHIAMANLNVGRIGIAA 246 The following BLAST results are available for this feature:
BLAST of FC930072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930072 ID=FC930072; Name=FC930072; organism=Citrus clementina; type=EST; length=668bpback to top |