FC930090
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930090 vs. ExPASy Swiss-Prot
Match: AB20I_ARATH (ABC transporter I family member 20 OS=Arabidopsis thaliana GN=ABCI20 PE=2 SV=1) HSP 1 Score: 335.88 bits (860), Expect = 1.231e-91 Identity = 165/201 (82.09%), Postives = 178/201 (88.56%), Query Frame = 1 Query: 40 GKTTILKIIGGKHMVEPEMVKALGRSAFHDTALTSSGDLSYLGGEWRREVAFAGFEVPIQLDVSAEKMIFGVAGIDPQRRAELIKVLDINLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITXXXXXXXXXXXXXXXXKECEERGATIIYATHIFDGLENWPSHIVYVAHGKLQLAMPMDKVKEASKLSLMRTVESWL 642 GKTTILKI+GGKHMVEP MV+ LGRSAFHDT LTSSGDL YLGGEWRR+VAFAGFEVPIQ+D+SAEKMIFGVAGIDPQRR ELIKVLDI++SWR+HKVSDGQRRRVQICMGLLKPFKVLLLDEIT KECEERGATIIYATHIFDGLE+WP+HIVYVA+GKLQLA+PM+KVKE SK SLMRTVESWL Sbjct: 60 GKTTILKILGGKHMVEPHMVRVLGRSAFHDTGLTSSGDLCYLGGEWRRDVAFAGFEVPIQMDISAEKMIFGVAGIDPQRRDELIKVLDIDISWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLKFLRKECEERGATIIYATHIFDGLEDWPTHIVYVANGKLQLALPMEKVKETSKKSLMRTVESWL 260
BLAST of FC930090 vs. ExPASy Swiss-Prot
Match: AB21I_ARATH (ABC transporter I family member 21 OS=Arabidopsis thaliana GN=ABCI21 PE=2 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 2.048e-62 Identity = 121/204 (59.31%), Postives = 150/204 (73.53%), Query Frame = 1 Query: 37 TGKTTILKIIGGKHMVEPE-MVKALGRSAFHDTALTSSGDLSYLGGEWRREVAFAGFEVPIQLDVSAEKMIFGVAGIDPQRRAELIKVLDINLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITXXXXXXXXXXXXXXXXKECEERGATIIYATHIFDGLENWPSHIVYVAHGKLQLAMPMDKVKE-ASKLSLMRTVESWL 642 +GKTT+LKI+ GKHMV + +V+ L RSAFHDT L SGDLSYLGG W + AG ++P+Q D SAE MIFGV GIDP RR +LI +LDINL WRMHKVSDGQRRRVQICMGLL PFKVLLLDE+T +ECE+RGATI+YATHIFDGLE W SH+ Y+ G+L+L+ +D++K+ + +L+ VE+WL Sbjct: 50 SGKTTLLKILAGKHMVGGKNVVQVLDRSAFHDTELVCSGDLSYLGGSWSKTAGSAG-DIPLQGDFSAEHMIFGVEGIDPFRREKLIDLLDINLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDVVARMDLLEFFKEECEQRGATIVYATHIFDGLETWASHLAYINGGELKLSAKLDEIKDLKTSPNLLSVVEAWL 252
BLAST of FC930090 vs. ExPASy Swiss-Prot
Match: AB19I_ARATH (ABC transporter I family member 19 OS=Arabidopsis thaliana GN=ABCI19 PE=2 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.124e-60 Identity = 120/204 (58.82%), Postives = 145/204 (71.08%), Query Frame = 1 Query: 37 TGKTTILKIIGGKHMVEPE-MVKALGRSAFHDTALTSSGDLSYLGGEWRREVAFAGFEVPIQLDVSAEKMIFGVAGIDPQRRAELIKVLDINLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITXXXXXXXXXXXXXXXXKECEERGATIIYATHIFDGLENWPSHIVYVAHGKLQLAMPMDKVKE-ASKLSLMRTVESWL 642 +GKTT+LKI+ GKHMV + +V+ L RSAFHDT L SGDLSYLGG W + V AG EVP+Q D SAE MIFGV G DP RR +LI +LDINL WRMHKVSDGQ+RRVQICMGLL PFKVLLLDE+T +EC++RGATI+YATHIFDGLE W +H+ Y+ G+L M ++E + +L+ VESWL Sbjct: 51 SGKTTLLKILAGKHMVGGKNVVQVLSRSAFHDTQLVCSGDLSYLGGSWSKTVGSAG-EVPLQGDFSAEHMIFGVEGTDPVRREKLIDLLDINLQWRMHKVSDGQKRRVQICMGLLHPFKVLLLDEVTVDLDVVARMDLLEFFKEECDQRGATIVYATHIFDGLETWATHLAYIQDGELNRLSKMTDIEELKTSPNLLSVVESWL 253
BLAST of FC930090 vs. ExPASy Swiss-Prot
Match: YE31_SCHPO (Uncharacterized ABC transporter ATP-binding protein C20G4.01 OS=Schizosaccharomyces pombe GN=SPAC20G4.01 PE=4 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 4.024e-34 Identity = 83/208 (39.90%), Postives = 115/208 (55.29%), Query Frame = 1 Query: 40 GKTTILKIIGGKHMVEPEMVKALGRSAFHDTALTSSGDLSYLGGEWRREVAFAGFEVPIQLDVSAEKMIFGVAGID-PQRRAELIKVLDINLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITXXXXXXXXXXXXXXXXKECEERGATIIYATHIFDGLENWPSHIVYVAHGKLQLAMPMDKV------KEASKLSLMRTVESWL 642 GK+T+LK++ GK + + + G+ F + SS YLG EW I D+S ++I V G +RR LI +LDI+L WRMH VSDG+RRRVQ+CMGLL+PF+VLLLDE+T +E E R ATI+YATHIFDGL WP+H+V+++ G++ P+ K +L+ T WL Sbjct: 42 GKSTLLKLLSGKSLAKAGHISVGGKDPFRE----SSSAFVYLGTEWVNNPV-------IHRDMSVARLIASVGGDKFAERRDFLISILDIDLRWRMHAVSDGERRRVQLCMGLLRPFEVLLLDEVTVDLDVLARADLLNFLQEETEVRNATIVYATHIFDGLAEWPTHLVHLSLGRIVDYGPISKFGALMTRSSTGNSALLETCLEWL 238
BLAST of FC930090 vs. ExPASy Swiss-Prot
Match: CAF16_YEAST (CCR4-associated factor 16 OS=Saccharomyces cerevisiae GN=CAF16 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.033e-26 Identity = 69/205 (33.66%), Postives = 107/205 (52.20%), Query Frame = 1 Query: 40 GKTTILKIIGGKHMVEPEMVKALGRSAFHDTALTSSGD------------LSYLGGEWRREVAFAGFEVPIQLDVSAEKMIFGVAGIDP--QRRAELIKVLDINLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITXXXXXXXXXXXXXXXXKECEERGATIIYATHIFDGLENWPSHIVYVAHGKLQLAMPMDKVKEASKL 612 GK+T+LK++ GKH+ + G F ++ D +YLG EW I D+ +++ + G D +R L+++LDI++ WRMH++SDGQ+RRVQ+ MGLLKP++VLLLDE+T E E R +++YATHIFDGL WP+ + ++ GK+ + K E S++ Sbjct: 46 GKSTLLKLLSGKHLCLDGKILVNGLDPFSPLSMNQVDDDESVEDSTNYQTTTYLGTEWCHMSI-------INRDIGVLELLKSI-GFDHFRERGERLVRILDIDVRWRMHRLSDGQKRRVQLAMGLLKPWRVLLLDEVTVDLDVIARARLLEFLKWETETRRCSVVYATHIFDGLAKWPNQVYHMKSGKIVDNLDYQKDVEFSEV 242 The following BLAST results are available for this feature:
BLAST of FC930090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930090 ID=FC930090; Name=FC930090; organism=Citrus clementina; type=EST; length=689bpback to top |